Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
314 |
| PWM (Da): |
34882.19 |
Transmb domain: |
i12-34o |
| PI (pH): |
5.1 |
|
Sequence
Send to BLAST
Send to Peroxiscan
|
| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
TKIGGVQGKG SELQLNYYSE SCPRAEEIVK EEVTQLYHKH GNTYxAVSWV RNLFHDCMVK SCDASLLLET SNGIISEKTA KRNFGMRNFK YVDVIKEALE RECPMTVSCA DIIALSARDG
VSLLGGPSID GMKTGRRDSK ESYSSVIDDF IPNHNDTMTL VLAQFQNVGI DAEGTVALLG AHSVGRVHCV NIVNRLYPDT DPTLDPDYAT YLKGRCPNPQ PDQKEVEYAR NDRETPMVID
NMYYKNLLSH KGLLLIDQQL TSDTSTYPFV EKMASDNGYF HDAISKALLL LSENNPLTGD EGEIRRDCRY INQE
|
Retrieve as FASTA
|
|
| Remarks |
Partial sequence from genomic. Incorrect prediction from phytozome (5' end is missing). |
DNA ►
Send to BLAST
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ACAAAAATTG GGGGTGTTCA AGGTAAGGGC AGTGAGCTTC AGCTAAACTA CTACTCGGAG AGCTGTCCAC GAGCCGAAGA GATTGTCAAG GAAGAAGTAA CTCAATTGTA CCATAAGCAT
GGCAACACAT ACAnnGCAGT ATCATGGGTT AGAAACCTTT TCCATGACTG CATGGTTAAG GTACTGGCAC ATCACAAATG ACACATGCAT ATAAATAAAT AAGTTGGCCG ATAACCACAT
GATATATGGC ATATATACTA ATTTTCTTCA GATTTTTCAA CAATTATATT GCAGTCCTGT GATGCCTCTC TTCTGTTGGA GACGTCGAAT GGCATAATCT CGGAGAAGAC AGCAAAGAGA
AACTTTGGTA TGAGGAATTT TAAATATGTA GATGTAATCA AGGAAGCTCT CGAGCGTGAA TGCCCCATGA CAGTTTCATG TGCTGATATC ATAGCTTTGT CTGCAAGAGA TGGTGTTTCA
CTGGTATACA TGCATGAATA CACCTAACTA ATATGCATGC ATGTTTGATA ATTAATATAG CCAGATAGGA CTATTTTCAA TCATAATACA AAACATTATA TGTTGCAGTT AGGAGGACCT
TCCATAGATG GTATGAAGAC TGGGAGAAGG GACAGTAAGG AAAGTTATAG TTCAGTGATC GATGACTTTA TCCCTAATCA TAACGACACA ATGACTTTAG TGCTTGCTCA ATTTCAAAAT
GTTGGAATTG ATGCTGAAGG AACAGTAGCT CTACTTGGTA TGTACCCTTA ATTTTTATTC AATGTAATCC ATATACTGTA TAAATTTGCA GGTGTTAATG TTAGAATCCA AATTTCCTCA
ACAAATGTTC AACCCCGTTA TATATATATC TGTTCAGGAG CTCACTCGGT TGGACGGGTA CATTGTGTGA ATATTGTGAA CAGACTGTAT CCAGACACTG ATCCAACATT AGATCCTGAT
TATGCAACGT ACCTTAAAGG CCGATGCCCA AATCCTCAAC CTGATCAAAA GGAGGTAGAA TACGCAAGAA ATGATCGTGA AACGCCCATG GTGATTGATA ACATGTATTA CAAGAACCTG
TTGAGCCACA AAGGACTCTT GCTAATAGAC CAGCAGTTGA CTTCTGATAC TTCTACATAT CCTTTTGTAG AGAAAATGGC TTCTGATAAT GGCTACTTCC ATGATGCAAT CTCAAAGGCC
CTCCTGTTAT TATCAGAGAA TAATCCACTT ACAGGTGATG AAGGAGAGAT AAGACGAGAT TGTCGATATA TCAATCAAGA ATAA
|
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ACAAAAATTG GGGGTGTTCA AGGTAAGGGC AGTGAGCTTC AGCTAAACTA CTACTCGGAG AGCTGTCCAC GAGCCGAAGA GATTGTCAAG GAAGAAGTAA CTCAATTGTA CCATAAGCAT
GGCAACACAT ACAnnGCAGT ATCATGGGTT AGAAACCTTT TCCATGACTG CATGGTTAAG TCCTGTGATG CCTCTCTTCT GTTGGAGACG TCGAATGGCA TAATCTCGGA GAAGACAGCA
AAGAGAAACT TTGGTATGAG GAATTTTAAA TATGTAGATG TAATCAAGGA AGCTCTCGAG CGTGAATGCC CCATGACAGT TTCATGTGCT GATATCATAG CTTTGTCTGC AAGAGATGGT
GTTTCACTGT TAGGAGGACC TTCCATAGAT GGTATGAAGA CTGGGAGAAG GGACAGTAAG GAAAGTTATA GTTCAGTGAT CGATGACTTT ATCCCTAATC ATAACGACAC AATGACTTTA
GTGCTTGCTC AATTTCAAAA TGTTGGAATT GATGCTGAAG GAACAGTAGC TCTACTTGGA GCTCACTCGG TTGGACGGGT ACATTGTGTG AATATTGTGA ACAGACTGTA TCCAGACACT
GATCCAACAT TAGATCCTGA TTATGCAACG TACCTTAAAG GCCGATGCCC AAATCCTCAA CCTGATCAAA AGGAGGTAGA ATACGCAAGA AATGATCGTG AAACGCCCAT GGTGATTGAT
AACATGTATT ACAAGAACCT GTTGAGCCAC AAAGGACTCT TGCTAATAGA CCAGCAGTTG ACTTCTGATA CTTCTACATA TCCTTTTGTA GAGAAAATGG CTTCTGATAA TGGCTACTTC
CATGATGCAA TCTCAAAGGC CCTCCTGTTA TTATCAGAGA ATAATCCACT TACAGGTGAT GAAGGAGAGA TAAGACGAGA TTGTCGATAT ATCAATCAAG AATAA
|
Retrieve as FASTA
|
|
