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Entry information : TmesGPx02_Fries
Entry ID 10107
Creation 2012-01-06 (Passaia Gisèle)
Last sequence changes 2012-01-06 (Passaia Gisèle)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2013-08-20 (Catherine Mathe (Scipio))
Peroxidase information: TmesGPx02_Fries
Name TmesGPx02_Fries
Class Fungi-Bacteria glutathione peroxidase    [Orthogroup: Gpx3001]
Taxonomy Eukaryota Fungi Basidiomycota Tremellomycetes Tremellaceae Tremella
Organism Tremella mesenterica    [TaxId: 5217 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value TmesGPx02_Fries
start..stop		 S start..stop
DcryGPx02 254 6.71e-88 9..180 5..183
DcryGPx03 251 2.69e-86 9..180 5..183
CgaGPx02 244 1.28e-83 1..181 1..186
CnGPx02_JEC21 242 7.05e-83 1..180 1..185
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '10107' 'join(2580554..2580673,2580924..2580973,2581031..2581172,2581419..2581454,2581502..2581590,2581835..2581961)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 2580554..2580673 118 N° 2 2580924..2580973 48 N° 3 2581031..2581172 140 N° 4 2581419..2581454 34
N° 5 2581502..2581590 87 N° 6 2581835..2581961 125  
join(2580554..2580673,2580924..2580973,2581031..2581172,2581419..2581454,2581502 ..2581590,2581835..2581961)


exon

Literature and cross-references TmesGPx02_Fries
DNA ref. JGI genome:   scaffold_2 (2580554..2581961)
Protein sequence: TmesGPx02_Fries
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   187
PWM (Da):   %s   20817.51  
PI (pH):   %s   6.93
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MPLLSSLSSMVGFESISPEIRAKSFYDLKATLPGKKELDFSQFKGKVVLIINTASKCGFTPQYTDLESLYKTYHDQGLEVLGFPCDQFAHQEPLDDDGIASFCQVNHGVTFPLMAKSDVN
GKNMNEVFAWLKAKMPGVAGTTNIKWNFTKFLIDRKGNVIHRYSPNTKPESFKGDIEKLLSEPAPEA*

Retrieve as FASTA  
Remarks Complete sequence from genomic (scaffold_2:2580554-2581961 (+), 5 introns) No EST.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCCTTTGTTATCTTCTTTATCCAGTATGGTAGGGTTCGAAAGTATTTCCCCTGAAATAAGGGCAAAGTCTTTCTACGATCTTAAAGCTACTTTACCGGGAAAGAAAGAACTTGATTTT
TTGTCAGTTGTTTCCTTTCTCTCTCTCTCCTCTTCTCTGTCTTTGTCTTCCTTCTCTTATCACCTGTCATTCATCCCATTCAAGTATCAAATCTGAGAACGATTCCACTCGAAGATGGTC
GCTTCTTCTTATTCATGCTCATCGGATCATCGGGTCAGAATATGTTTCGTAAATGAGACATTCCATGATCGTCATCATAGTACATACATAAATCACCGTAATAAGAAGCACGGTCAGAGC
TTATATGGGTAGAGTCAATTCAAAGGCAAAGTCGTGCTTATCATCAATACCGCTAGCAAATGTGGTATGTTCACAAAATCTCAGAGGGCCAAACGGGTTTGGGTTTGGGGCTAATGAGAA
GCGGTTTCACTCCTCAATATACAGATCTGGAGTCGTTGTACAAGACTTATCATGATCAAGGTTTAGAAGTATTGGGATTTCCATGTGATCAATTCGCACATCAAGAACCGTTGGATGATG
ATGGTATTGCTTCGTTTTGTCAAAAGTGAGTGGCGATCATCTCTTTCGTAACTCAGACTCTTCATCGCACCCCCTCCCCTTCCTTACAAAAAGAAAGGAATATGCATTCTTTCTGATTCC
TCTCCTTTCCTGGATTCTGTGGTGTTGTCAACATCAGTCCCGCCGTTAGATATGAAAGCGACCGTGTGTCTCAAGAACAATTCTGTTCGATGGGTACCAGATAGTCGAACAACCGAAAAC
GAAAACCTTTGTGTACACATACTGACATCAGGTCAACCACGGAGTAACCTTCCCCCTCATGGCCAAAAAGTGAGTTCCTCTCATCCCCATTTCTCCTCATAAATGCTCATAAATAGTCCG
ATGTGAATGGTAAAAATATGAACGAAGTTTTTGCGTGGTTGAAAGCTAAAATGCCCGGTGTGGCCGGGACGACCAATATCAAGTGTGGTCAGTCCATGTTGATTACGCCTCTTCCCCACT
CCATATCCCCTCGTTTAATCCTCACTTTCACCTGTCTTGTCATTATAGACTTGCTCATCCCCCAAGAATTTGTTCACGTATTCGTTGCGTTCATCCGACATTTTCTGAGTAACGAAATCT
CCTCTGAGTAACGAAACTCCATCTGAGTGAGACATCGTCAGAACGGGATAGATATCAAGAAAGGTCATAGGATGGCGATATTGACCAATAGGAACTTCACCAAATTCCTCATTGATAGAA
AAGGGAATGTCATCCATCGTTATTCACCCAATACTAAGCCAGAGTCATTCAAGGGTGATATCGAGAAACTTCTCTCGGAACCGGCACCTGAGGCTTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCCTTTGTTATCTTCTTTATCCAGTATGGTAGGGTTCGAAAGTATTTCCCCTGAAATAAGGGCAAAGTCTTTCTACGATCTTAAAGCTACTTTACCGGGAAAGAAAGAACTTGATTTT
AGTCAATTCAAAGGCAAAGTCGTGCTTATCATCAATACCGCTAGCAAATGCGGTTTCACTCCTCAATATACAGATCTGGAGTCGTTGTACAAGACTTATCATGATCAAGGTTTAGAAGTA
TTGGGATTTCCATGTGATCAATTCGCACATCAAGAACCGTTGGATGATGATGGTATTGCTTCGTTTTGTCAAGTCAACCACGGAGTAACCTTCCCCCTCATGGCCAAATCCGATGTGAAT
GGTAAAAATATGAACGAAGTTTTTGCGTGGTTGAAAGCTAAAATGCCCGGTGTGGCCGGGACGACCAATATCAAGTGGAACTTCACCAAATTCCTCATTGATAGAAAAGGGAATGTCATC
CATCGTTATTCACCCAATACTAAGCCAGAGTCATTCAAGGGTGATATCGAGAAACTTCTCTCGGAACCGGCACCTGAGGCTTGA

Retrieve as FASTA