View Redoxidase 10164

Entry information : EgrGPx03 ( Eucgr.C02602 / Egrandis_v1_0.024391m)

Entry ID	10164
Creation	2012-01-25 (Qiang Li)
Last sequence changes	2012-01-25 (Qiang Li)
Sequence status	complete
Reviewer	Christophe Dunand
Last annotation changes	2016-01-22 (Christophe Dunand)

Peroxidase information: EgrGPx03 ( Eucgr.C02602 / Egrandis_v1_0.024391m)

Name (synonym)

EgrGPx03 ( Eucgr.C02602 / Egrandis_v1_0.024391m)

Class

Plant glutathione peroxidase [Orthogroup: Gpx2001]

Taxonomy

Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus

Organism

Eucalyptus grandis [TaxId: 71139 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	EgrGPx03 start..stop	S start..stop
EguGPx03	483	2.08e-176	1..247	1..247
EglGPx03	423	9.5e-153	1..238	1..218
VvGPx01	363	7.39e-129	1..247	1..246
CsGPx01	347	1.82e-122	3..247	5..245

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '10164' 'complement(join(49569000..49569029,49569455..49569622,49569706..49569824,49571022..49571083,49571164..49571240,49571813..49572100))'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	49571813..49572100	286	N° 2	49571164..49571240	75	N° 3	49571022..49571083	60	N° 4	49569706..49569824	117
N° 5	49569455..49569622	166	N° 6	49569000..49569029	28
complement(join(49569000..49569029,49569455..49569622,49569706..49569824,4957102 2..49571083,49571164..49571240,49571813..49572100))

Literature and cross-references EgrGPx03 ( Eucgr.C02602 / Egrandis_v1_0.024391m)

DNA ref.	Phytozome 12: scaffold_3 (49572100..49569000)

Protein sequence: EgrGPx03 ( Eucgr.C02602 / Egrandis_v1_0.024391m)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	247
PWM (Da):	26838.7	Transmb domain:	i7-24o
PI (pH):	10

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MASAPFSAAFSAPSYGFRRARTNGNSPFPTSLWSPAALRVPSSVRSSLGSCNSAFLVNGLSSSSLPSSSRLSFSSRSSGVYARAATEKTLYDFSVKDIDRNDVSLSKFKGKVLLIVNVAS
KCGLTTSNYKELSHVYEKYKTGFEILAFPCNQFGGQEPGSNPEIKQFACTRFKAEFPIFDVDVNGPGTAPVYQFLKSSAGGFLGELVKWNFEKFLVDKNGKVVERYPPTTSPFQIEKDIQ
KLLAA*

Retrieve as FASTA

Remarks

Complete sequence from genomic (scaffold_3, 5 introns).

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCCTCGGCCCCTTTTTCGGCCGCTTTCTCCGCCCCTTCGTACGGCTTCCGTCGAGCCAGAACGAATGGAAACTCCCCCTTTCCGACCTCCCTTTGGTCGCCGGCCGCTCTTCGCGTG
CCGTCATCGGTTCGATCCTCGCTCGGTTCGTGTAATTCGGCTTTTCTCGTTAATGGGTTGTCGTCGTCGTCCCTTCCGAGTTCGTCGCGGCTCAGCTTCAGTTCTCGCTCGTCGGGTGTT
TATGCTAGAGCTGCCACTGAGAAGACCCTCTACGATTTCAGCGTGAAGGTATCGAATTTCTCTTCTGGGTGTAGCTGAAATTGGTATTTGGAGAGATCTTCTTTTTTGGGTCGTCAGGGA
ACTTTGTAATTCACTTAGATACGGTGTTTTTATGTATTTATTTATCTTCGGTAGAATCAATCAATTCTGATGGCTTGCCCAAGCTACTTTGGAAATTAGAAAAAAAATATATCTTAATTG
TCTCAGCCGCCACACTGTTTTTTGCATCTTCTCTGTTTTATTGTTACTTTTGGATGACGAGGAAGCACATTTTAGCTACTTAACATTGGTGCTTCCAATTTGGACTAAAAGAAATCAAGC
TGGAGTTGAGGTCGCTTATTTGCTCTTTGTTCATGAATTGAACTAATTTGCAAATTCTCCACGGTATGCAAATCCTTAGAATTAAGATTCATGCTGTTGTGGCTAAAAATTCTTCGTTGT
TTTGGCACCTGCTATGTTTCGGTAATTTATGTGGACATTATTATACTATTCATTTTTCGGTTTACATACTGAATTTTGGGTAAAGCTGCTTTATTCATGATAATTGCTAATTGCTGCACA
CATTTTTCTTCATGGTTCAGGAGACATTGATAGGAATGATGTTTCATTGAGCAAATTCAAGGGAAAAGTCTTATTAATTGTGAACGTAGCTTCGAAATGGTAATTGCTTTATCTCCTTCA
GTTGTCTGATTTAATTTATCAGATTCACAGTCTCATTGAAGAATTTTCTTGTGATTCAGTGTGGTTTAACGACATCAAACTACAAGGAGCTCTCGCACGTATATGAGAAGTACAAGACTC
AAGGTGAGATGAGATTGTGGGGAGAGTTATAGAATTCCTTAAAAGCTTCTCCTGTTTGAAGTTAGACTACTATCTTTGAGCTAGGAGGGATCATTAATTTTTAAATATAGTAGATGAAAT
CATGATTCAGCAAAGGATGTGAATCACCTTATTATATCAGTGTCTTTTTCCAATCATCGGAAAATGTACAATATCAATGGAGTTTTGTCTGTCCTACACGCCAAAAGATTCAAGTGGAAG
TTCTGTTCAAGTTCTCAAGACCATCTAATTAGGAGCTGAATTTCCCTTAACAACAAGTCACGTCGATCATTATGCTTCTCACTTATAGTTTTTTTAATGATATGGGCTCCAACCAAAATT
TAATCTTCTCAAGCAAGCTTTGTTTAGTTTGCCCTGTGGTACTGGGTCTTACAGAGATTGCTAAAGGGATTGTCCAATGGTCTTTGCTGCGGTTGAGTGTAACAGTGTGCTAGAAATCAG
TTGTCCTTTATTTTTCCGTGGGACTTTTATCAGTGTTTTTTCCAGTCCATTTTCAGGTGTTATATTTTGCCAATGATGTTTGTTACATCTTCTTTTTGGTACTCTTGCACATTTACGAAG
GGCACAGTTAGAGATGCTTCCTTTGTGTGTGTGTGTACGAGGGAGAGAGAGAGAGAGAGTAGTATATCCTGGATGGATGGATGAATGGATGGGGTGATAGGGGTAGAGAAAGAGAGATGT
ACCTCCACTGATGAAAAGGAAGGGTTCTTTGTTTGGATGCAAGGAGAGAGACATAGAGAGGGAGAGGCCTATTGCCTCTACCGCAAGGGTGGGATGGCTGTTTCTTTGCTGGGATGGAAA
CAGTGGGAGACCTCCACTGATGAAAGGAAAGGAGTTTTTTTTTTTTTTTTTTTTTGGTGGGGGGGGGGGGGGGGAGCTATATATTTTGCTATATCCAAGAGACAGGAAGAGATCCACTTC
TTAGAGAGTGAAATAAGTTCTTTGCTTTGATTCAAGGAGAGAGCTATAGAGAGGGAGAGACCTATTGCCTCTACTGGAAGGGTGGGATGGCTGTTTCTTTGCTGGGATGGAAAGAGTGGG
AGACCTCTTTCCTCTGATATAATGTATAGCTTGAATCTTCTATGCAGATTTGGATTTGGTTAGTCCTCTTTCTATATCTTTAAAATTGATAAGAAACACCTTGGGCTGTCCATGTTACAG
GTGTTTTGAAATTCTGGCTTTTCCTTGTAATCAATTTGGTGGCCAGGAGCCTGGTTCAAATCCTGAGATTAAACAATTTGCTTGTACAAGGTTTAAAGCAGAGTTTCCGATTTTTGATAA
GGTTTGACTTCCACACATACGTTCTTTCCTCTATTTTAAGTGATGGCTGGAATGAACAACTGAGCTCAAGTCTGTTGGAAACAGGTGTTGATGTTAATGGACCAGGTACAGCTCCTGTGT
ATCAGTTTCTGAAATCGAGTGCAGGAGGTTTTTTGGGTGAACTGGTCAAGTGGAACTTTGAGAAATTTCTGGTTGACAAAAATGGCAAAGTTGTGGAGAGATATCCTCCAACAACGTCTC
CTTTTCAAATAGAGGTACGTTTTTTAAGCTAACTTGTGAAGTTCGGAGATATGCCTAAGTAATCGATGTTCTGAAGTATGGCAATTGCTTGCTATCATGACTGCATGGAGATGGTTACGG
TCTTGTATGTTGTGTGACTGTATATCCGGTGTGCTTTTGTAATCGTTCACCATGCCGTTCCCATAGAAAAAGCTGGTCCCTATTCTTTCCCTTTCTGAGGCAGAGTTTTGTATGTTCATT
GTAACTTCAGTGTGTTCTCAATGCACTAATTCCCCTGGGTCACCGACAATAATAAGTTTTTACACCTCCCATTCACCAGAAAGGAGGTCTATATGTCACGTTCAATAATTCTAGAAGAAA
AGACCAACAAAAGACTATCTTCAAGCCTCAGAATGATTTGAGAAGTTCTTTCGATTAACATTCTCGAGTCTTCTTGCAGAAAAGGACATTCAGAAGCTTCTTGCTGCTTGA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA