Entry information : EcamPrx[P]47 ( EcC050920.30)
Entry ID 10295
Creation 2012-01-30 (Qiang Li)
Last sequence changes 2013-02-06 (Qiang Li)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2016-01-21 (Christophe Dunand)
Peroxidase information: EcamPrx[P]47 ( EcC050920.30)
Name (synonym) EcamPrx[P]47 ( EcC050920.30)
Class Class III peroxidase    [Orthogroup: Prx297]
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus camaldulensis    [TaxId: 34316 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EcamPrx[P]47
start..stop
S start..stop
EgrPrx[P]47 461 5.12e-165 1..316 1..323
EglPrx[P]47 461 6.01e-165 1..316 1..322
EguPrx[P]47 434 1.59e-154 1..316 1..323
EglPrx48 287 1.58e-96 19..307 21..319
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '10295' 'join(1..198,1570..2315)' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1..198 196 N° 2 1570..2315 744  
join(1..198,1570..2315)


exon

Literature and cross-references EcamPrx[P]47 ( EcC050920.30)
Protein sequence: EcamPrx[P]47 ( EcC050920.30)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   315 (296)
PWM (Da):   %s   34202.58 (32082.4) Transmb domain:   %s   i13-30o
PI (pH):   %s   10.03 (9.90) Peptide Signal:   %s   cut: 20 range:20-315
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MKMITIFLGFIFLLPQGLGNLKVGFYNFICPRAESIVHQVVRSRFQADQSITAALLRMHFHECFVRGCDASILIDSTDSNPLKKSAAPNLTVRGFEIIDEAKKNIEASCPSMVSCADIAT
LAxTRYAVFLAGGPSYDVATGRRDGIISARDEVNLPGPTFSQQKDSLLPKWSFSWVDTPLESLTTRPYLRFMxGTGAPDRSMDPSLIMKLKVTCGASSSSDPTVSLDQSTPSSSITSSIA
RFLRREGYCKLIRSSLLINRPRQSSLSTGWTQNGFRLSFAIAMVKMSNVGVLTGNAG*IGKNCRVFQLARMLRQLG

Retrieve as FASTA  
Remarks Pseudogene sequence from genomic (frame shift and stop in frame). Incorrect prediction from kazusa (5' end is missing which has been completed manully). The same with EcC039920.40 (Removed) at DNA level.
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAAGATGATAACTATCTTTCTCGGGTTCATTTTTCTTCTTCCTCAGGGTTTGGGCAATCTGAAGGTCGGCTTCTACAACTTTATTTGCCCGCGAGCTGAGTCCATCGTCCATCAGGTC
GTGCGGAGTCGATTCCAAGCCGACCAATCCATCACGGCTGCCTTGCTCCGCATGCATTTCCACGAATGTTTCGTTAGA
GAGTAAGTTTCGTGCATGTATGTGTCTGCACACGTGCTCTCG
ATGCTAGGATGTAAACTTATAAACATCATATTTATAAAATTGATTTATCTATCATTGTAACGAAATGTGAATAAATTCTGAAATAGGTCAGTCATTGTTAAATGTTTAGTGAAAATCCCT
ACATCAATCATTTTTGTGTCTTCCAGCATACGTTAGTCAAAGATGATTAGAATCCATGTGCAATTTATAAATAGTTTATGGGTTCTATAGAGTATTTGTCTCAATTTGGATAATAATAAA
AAATTGGCACGGAATGACACTTAAGTGCCAAAAGTTATGAAAGTAACACTTAAGTACTAAAATTAGATCAAAATGAATCAGTTAAGTGCCAACGGCGAGAAAATCCTACTAAAATGCTGA
CGTGGCGATTTTCCGGTGAAGCAAGTGCAAAACGATAACGTTTTGCACGTTGATGTGGCTAGACAAATGTAAAAACAACATCGTTTTGTTATTGACGTGACTAAATAAATAATATAAAAT
TTATTAAATTAAATTTAAAACTAACATATATATATATATATATTTTTTTTAGAAAAAAAAAAGGAAGAAGATGAACAGCGGCTAAGGGCTCAACTCTCGTTGTCGTCACCTCCCCGCTGT
CGATGGGAAGGGCCGGTGACGTTGGGGGGAGGGTTAGCCGGGGACCTCGGTCGATCAGCGGTGAGGGCCTACGAGCCCTTGCCTAGATCTAGGGGGAGGGTCGTAGCCCTCCCCTAGATT
TGGCGAGGGTTGCCAGCCCTCGCTTGGCTAGGCCAAGAGCCGTCGCTTGTTGGGGGGCCAAGGCCAGCGACCTCGTTGACCATGCCCCCAACGTCGTCAGCCATTCTTCGTGACAACGGG
GAGGGGGTGGCGGCGAGGGTTGAGCCTTTAGCTGTTGTTCATCTTCTTCCTTTCTCTCTCTCTTTAATTTAATTCAACTTAATTAGTTTTCAAATACAAATTTAAATATGTGCCAAAACA
ACATCTTTTTTGCATTTTTTTGTTGAGTCAGCTCTTCAACAAGCCACATAGGCGAGCAAAATTAATTAAAAATTGCCATGTAGGATTTTTGGCAGCATTCGTCGGAAGTGGCATTCGAGT
GTCCCATTTTTTTTTTAATTTTTAAAAAGTAGCACTTAAGTGTAACTTTTCTAATTTTTGGTACTTAAGTGTCCTATTGTGCCAAGTTTTGGTGCTTGGGGTGTTCTTTTGTTTTGCACA
GAGTATTTGTCTCCATTTGGATACATATTTGTGGAAATTAGAGATTGTATGGATACTGTGATATATGTGCAATTTCAAGAGATATGGATAATCAATAGAGTATTTACTCCTACTTCCTTC
CTCTCATTTAGGGTTGTGACGCATCCATACTCATAGACTCTACCGACAGCAATCCGTTGAAGAAATCCGCCGCCCCGAACCTAACTGTGCGAGGCTTCGAAATCATTGACGAAGCCAAGA
AGAACATTGAAGCCTCATGCCCTTCGATGGTCTCCTGTGCCGACATCGCAACTTTGGCAANNACACGGTACGCGGTCTTCTTGGCAGGAGGGCCTAGCTATGATGTCGCGACGGGAAGGC
GAGATGGCATCATCTCGGCCCGCGACGAAGTTAACTTGCCAGGACCGACATTCTCGCAGCAAAAGGATTCACTCTTGCCGAAATGGTCATTCTCTTGGGTGGACACACCATTGGAATCGC
TCACTACTAGACCATATCTCAGATTTATGANNGGTACCGGCGCTCCGGACCGATCCATGGACCCAAGCTTGATCATGAAGCTCAAGGTCACCTGTGGCGCTTCATCAAGTAGCGACCCGA
CCGTGTCCTTGGACCAGAGCACGCCGTCATCGTCGATAACAAGTTCTATAGCGAGATTCTTGCGAAGAGAGGGATATTGCAAATTGATCAGGAGCTCACTGTTGATAAATCGACCACGGC
AATCGTCGCTAAGTACGGGTTGGACGCAAAATGGATTTAGGCTGAGTTTTGCAATCGCGATGGTGAAGATGAGCAATGTCGGAGTTCTAACAGGAAATGCTGGATAGATTGGGAAAAACT
GTAGGGTTTTCCAACTAGCTAGAATGCTCCGCCAGTT

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAAGATGATAACTATCTTTCTCGGGTTCATTTTTCTTCTTCCTCAGGGTTTGGGCAATCTGAAGGTCGGCTTCTACAACTTTATTTGCCCGCGAGCTGAGTCCATCGTCCATCAGGTC
GTGCGGAGTCGATTCCAAGCCGACCAATCCATCACGGCTGCCTTGCTCCGCATGCATTTCCACGAATGTTTCGTTAGA
GGTTGTGACGCATCCATACTCATAGACTCTACCGACAGCAAT
CCGTTGAAGAAATCCGCCGCCCCGAACCTAACTGTGCGAGGCTTCGAAATCATTGACGAAGCCAAGAAGAACATTGAAGCCTCATGCCCTTCGATGGTCTCCTGTGCCGACATCGCAACT
TTGGCAANNACACGGTACGCGGTCTTCTTGGCAGGAGGGCCTAGCTATGATGTCGCGACGGGAAGGCGAGATGGCATCATCTCGGCCCGCGACGAAGTTAACTTGCCAGGACCGACATTC
TCGCAGCAAAAGGATTCACTCTTGCCGAAATGGTCATTCTCTTGGGTGGACACACCATTGGAATCGCTCACTACTAGACCATATCTCAGATTTATGANNGGTACCGGCGCTCCGGACCGA
TCCATGGACCCAAGCTTGATCATGAAGCTCAAGGTCACCTGTGGCGCTTCATCAAGTAGCGACCCGACCGTGTCCTTGGACCAGAGCACGCCGTCATCGTCGATAACAAGTTCTATAGCG
AGATTCTTGCGAAGAGAGGGATATTGCAAATTGATCAGGAGCTCACTGTTGATAAATCGACCACGGCAATCGTCGCTAAGTACGGGTTGGACGCAAAATGGATTTAGGCTGAGTTTTGCA
ATCGCGATGGTGAAGATGAGCAATGTCGGAGTTCTAACAGGAAATGCTGGATAGATTGGGAAAAACTGTAGGGTTTTCCAACTAGCTAGAATGCTCCGCCAGTT

Retrieve as FASTA