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Entry information : EgrPrx[P]47 ( Eucgr.A02146 / Egrandis_v1_0.054048m)
Entry ID 8088
Creation 2011-02-04 (Christophe Dunand)
Last sequence changes 2012-02-16 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2016-01-21 (Christophe Dunand)
Peroxidase information: EgrPrx[P]47 ( Eucgr.A02146 / Egrandis_v1_0.054048m)
Name (synonym) EgrPrx[P]47 ( Eucgr.A02146 / Egrandis_v1_0.054048m)
Class Class III peroxidase     [Orthogroup: Prx195]*
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus grandis    [TaxId: 71139 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EgrPrx[P]47
start..stop		 S start..stop
EglPrx[P]47 642 0 1..323 1..322
EguPrx[P]47 590 0 1..323 1..323
EcamPrx[P]47 451 2.37e-161 1..323 1..316
EglPrx48 414 2.06e-146 20..314 22..319
Literature and cross-references EgrPrx[P]47 ( Eucgr.A02146 / Egrandis_v1_0.054048m)
DNA ref. Phytozome 12:   scaffold_1 (32123385..32125908)
Protein sequence: EgrPrx[P]47 ( Eucgr.A02146 / Egrandis_v1_0.054048m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   323 (304)
PWM (Da):   %s   34867.79 (32719.6)  
PI (pH):   %s   8.74 (8.40) Peptide Signal:   %s   cut: 20 range:20-323
Sequence
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MKMITIFLGF IFLLPRGLGN LKVGFYHSTC PRAESIVHQV VQSRFQADQS ITAALLCMHF HECFVRGCDA SILIDSTDSN PMKKSAAPNL TVRGFEIIDE AKKNIEASCP SMVSCADIAT  LATRYAVFFA GGPNYDVATG RRDGIISARD EVNLPGPTFS VSQAQRAFAA KGFTLAEMVI LLGGHTIEIA HYxRPYPRFM GTGAPDRSMD PSLIMKLKVT CGASSSGDPT VSLDQSTPSI 
VDNKFYSEIL VKRGILQIDQ ELTVDKSSTA IVAKFGLDAN GFRLSFANAM VKMSNVGVLT GNAGEIRKNC RVFQLARMLR QLG 

Retrieve as FASTA  
Remarks Pseudogene from genomic. Incorrect prediction from Phytozome (3'intron). Frame shift just after VALS. Missing residues. No EST.
DNA ►
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGAAGATGA TAACTATCTT TCTCGGGTTC ATTTTTCTTC TTCCTCGGGG TTTGGGCAAT CTGAAGGTCG GCTTCTACCA CTCTACTTGC CCGCGAGCTG AGTCCATCGT CCATCAGGTC  GTGCAGAGTC GATTCCAAGC CGACCAATCC ATCACGGCTG CCTTGCTCTG CATGCATTTC CACGAATGTT TCGTTAGAGT AAGTTTCGTG CATGTGTGTT TGGACACGTG CTCTCGATGC  TAGGATGTAA ACGTATAAAC ATCATATCAT AAAATTGATT TATCTATCAT TGTAACGAAA TGTGAATAAA TTCTTAAATA GGTCAGTCAT TTTTAAATGT TTAGTGAAAG TCTCTACATC  AATCATTTTT GTGTCTTCAA GCATACGTTA GTCAAAGATG ATTAGAATCC ATGTGCAATT TATAGATAGT TTATGGGTTC TATAGAGTAT ATGTCTCAGT TTGGATAATA AAAAAAAATT  GGCATGAAAG GATATTTAAG TGCCAAAAGT TAGGAAAGTG ACACTTAAGT ACCAAAATTG AATCAATTAA GTGCCAACGG CGAGAAAATT TGACTAAAAT GCTGACATGG CAATTTTTTG  GCAAGACAAG TGCAAAACGA CGACGTTTTG CACGCTGATG TGGTTAGGCA AATGTAAAAA CAACTTCGTT TTGTTACTGA TGTGGCTAAA TAAATAATAT AAAAATTCAT TATATTAAAT  TTAAAACTAA TTTTCTTTAA AAAAAAAAAA AAGGGAAAGA AGATGATAGC TGCTGAGGGC TCAACCCTCT TTGTTGTCAC CTCCCCATCG TCGATGGGAA GGGCCGATAA CGGTGGGGGG  AGGGTCGGCT GGGGTCATTA GCCCTGGCCA GGGGTCGACA ACCTTGATCA ATTGGCAATG AGGGCCTACG AGCCCTTGCC TAGATCCGAC GAGGGTCGCT AGCCCTTGCT CAGCTGGGCC  AAGAGCCGTC GCTTGCTGGG GGGCCAAGGC CAGCGACCTC GGCTGACCAT CCCCCTATCG TCGTCGACCC TTCTCCGCAA CAACGGGGAG GGGGCGGTGA CAAGGGTTGT GCCTTAGCCG  TTGTTCATCA TCTTCTTCTT CTTCTTCTTC TCTCTCTCTC TCTCTCTCTC TCTCTCTCTC TCTCTCTTAT TTAATTTAAT TTAATTAATT TTTAAATTCA AATTCAAATC TGCGCCAAAG  TGATGTCTTT TTTGCATTTT TTTTGCTAAG TTAGCTCTTT GATTTGCATT TTTTTTGCTA AGTTAGCTCT TTGATGAGTC ACGTAAATGA GCAAAATTAA TTAAAAATTG CCATGTATGA  TTTTCGGCGA GGTTTGTCGG AAGTGACATT CGAGTGTCCC ATTTAAAAAA AAAAAGTAGT ACTTAAGTGT CACTTTCCTA ATTTTTTGTA CTTAAGTGTC TCATAGTGCC AAATTTTGGC  GCTTGTGGTG TTCTTTTGTT TTGTATAGAG TATTTGCCTC CATTTGAATA CATATTTGTG GAAATTAGAG ATTGCATGGA TACTGTGATA TATGTGCAGT ATATGTGCAA TTTCGAGAGA  TATGGATAAT CAATAGAATT ATTATAATTA ACTCTAATAT AGGAAATTCT CCAAAGAAAT CCCTAATTAT CTCTAACAAA TAGTAAATGT AGTCTAGCCA ATCATTTGAT GAAAGAGCAC  GGTATTAACA TGCCATGATT CTTCCTATCA CGATGTCCAC TAATTTACTC CTACTTCCTT CGTCTCATTT AGGGTTGTGA CGCATCCATA CTCATAGACT CTACCGACAG CAATCCAATG  AAGAAATCCG CCGCCCCGAA CCTAACTGTG CGAGGCTTCG AAATCATTGA CGAAGCCAAG AAGAACATCG AAGCCTCATG CCCTTCGATG GTCTCCTGTG CCGACATCGC AACTTTGGCA  ACACGGTACG CGGTCTTCTT TGCAGGAGGG CCTAACTATG ATGTCGCGAC GGGAAGGCGA GATGGCATCA TCTCGGCCCG CGACGAAGTT AACTTGCCAG GACCGACATT CTCGGTGTCT  CAGGCTCAAC GAGCCTTCGC AGCAAAAGGA TTCACTCTTG CCGAAATGGT CATTCTCTTG GGTGGACACA CCATTGAAAT CGCTCACTAC TnnAGACCAT ATCCCAGATT TATGGGTACC  GGCGCTCCGG ACCGATCCAT GGACCCAAGC TTGATCATGA AGCTCAAGGT CACCTGTGGT GCTTCATCAA GTGGCGACCC GACCGTGTCC TTGGACCAGA GCACGCCGTC CATCGTCGAT  AACAAGTTCT ATAGCGAGAT TCTTGTGAAG AGAGGGATAT TGCAAATTGA TCAGGAGCTC ACTGTTGATA AATCGAGCAC GGCAATCGTC GCTAAGTTCG GGTTGGACGC AAATGGATTT  AGGCTGAGTT TTGCAAACGC GATGGTGAAG ATGAGCAATG TCGGAGTTCT AACAGGAAAT GCTGGAGAGA TTAGGAAAAA CTGTAGGGTT TTCCAACTAG CTAGAATGCT CCGCCAGTTA 
GGATAA 

Retrieve as FASTA  
CDS►
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGAAGATGA TAACTATCTT TCTCGGGTTC ATTTTTCTTC TTCCTCGGGG TTTGGGCAAT CTGAAGGTCG GCTTCTACCA CTCTACTTGC CCGCGAGCTG AGTCCATCGT CCATCAGGTC  GTGCAGAGTC GATTCCAAGC CGACCAATCC ATCACGGCTG CCTTGCTCTG CATGCATTTC CACGAATGTT TCGTTAGAGG TTGTGACGCA TCCATACTCA TAGACTCTAC CGACAGCAAT  CCAATGAAGA AATCCGCCGC CCCGAACCTA ACTGTGCGAG GCTTCGAAAT CATTGACGAA GCCAAGAAGA ACATCGAAGC CTCATGCCCT TCGATGGTCT CCTGTGCCGA CATCGCAACT  TTGGCAACAC GGTACGCGGT CTTCTTTGCA GGAGGGCCTA ACTATGATGT CGCGACGGGA AGGCGAGATG GCATCATCTC GGCCCGCGAC GAAGTTAACT TGCCAGGACC GACATTCTCG  GTGTCTCAGG CTCAACGAGC CTTCGCAGCA AAAGGATTCA CTCTTGCCGA AATGGTCATT CTCTTGGGTG GACACACCAT TGAAATCGCT CACTACTnnA GACCATATCC CAGATTTATG  GGTACCGGCG CTCCGGACCG ATCCATGGAC CCAAGCTTGA TCATGAAGCT CAAGGTCACC TGTGGTGCTT CATCAAGTGG CGACCCGACC GTGTCCTTGG ACCAGAGCAC GCCGTCCATC  GTCGATAACA AGTTCTATAG CGAGATTCTT GTGAAGAGAG GGATATTGCA AATTGATCAG GAGCTCACTG TTGATAAATC GAGCACGGCA ATCGTCGCTA AGTTCGGGTT GGACGCAAAT  GGATTTAGGC TGAGTTTTGC AAACGCGATG GTGAAGATGA GCAATGTCGG AGTTCTAACA GGAAATGCTG GAGAGATTAG GAAAAACTGT AGGGTTTTCC AACTAGCTAG AATGCTCCGC 
CAGTTAGGAT AA 

Retrieve as FASTA