Entry information : EcamPrx[P]07
Entry ID 10316
Creation 2012-01-30 (Qiang Li)
Last sequence changes 2012-02-03 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2016-03-22 (Christophe Dunand)
Peroxidase information: EcamPrx[P]07
Name EcamPrx[P]07
Class Class III peroxidase     [Orthogroup: Prx092]*
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus camaldulensis    [TaxId: 34316 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EcamPrx[P]07
start..stop
S start..stop
EguPrx[P]07 278 1.19e-98 10..144 1..135
EgrPrx[P]07 274 5.77e-95 14..148 140..274
EguPrx12 245 8.7e-83 1..148 187..334
EgrPrx12 244 3.69e-82 1..148 187..334
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '10316' 'join(1..34,312..724)' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1..34 32 N° 2 312..724 411  
join(1..34,312..724)


exon

Literature and cross-references EcamPrx[P]07
Protein sequence: EcamPrx[P]07
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   148
PWM (Da):   %s   16332.94  
PI (pH):   %s   7.34
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GLDVLDLTTLLGGHSMGKTNCSFIADRLYNFNKTGKPDPSMDSSFLALMREQCPPNSKNQVYLDPDSGSNYSFSKSFYSRVLNHRAVLSIDQQIAANNDSSQIAEEYNASFEDFWKMLAL
SMSQMGNIKVLTGKQGEIRKNCRVVNGK

Retrieve as FASTA  
Remarks Pseudogene sequence from genomic. No prediction from Kazusa. (Big 5' end is missing)
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GGTTTGGATGTGCTGGACCTTACTACTCTACTCGCGGTACAATTGAACCTCATATGAAAAGGTATTTAACTTGTGACCTCGTTAAATTACATTAGATCTCAAGCAATCCTTTTCGATTTT
AATTTTTCGAAATCTCCATCTAATTGTCAGGATACGTAGAATTTTATCAGATATAGGATAGTCGAGAATATAATCCGAACCGATCCTCCCAATGATTACCTCTAAGTGCACGAAACGACA
TGTTTATGTACTATGTCAAATATCAAAATCAGAACCAATTCCTAACTTGCCAAAACAATGTAAATTTTGCCAGGAGGGCATTCAATGGGCAAGACCAACTGCAGCTTCATCGCGGACCGG
CTGTACAATTTCAACAAAACTGGCAAGCCAGACCCAAGCATGGACTCATCCTTCTTGGCCCTGATGAGGGAGCAATGCCCACCGAACTCTAAGAACCAAGTGTACCTTGACCCTGATTCA
GGCTCCAACTACAGCTTCAGCAAGTCATTCTACTCCAGGGTCTTGAACCACCGTGCCGTCCTCAGCATCGACCAGCAGATCGCTGCCAACAACGACAGCTCCCAGATCGCTGAGGAGTAC
AATGCCAGTTTTGAGGACTTCTGGAAGATGTTGGCCCTATCGATGAGCCAGATGGGGAACATCAAGGTCTTGACGGGGAAGCAGGGGGAGATTCGCAAGAATTGCCGAGTCGTGAACGGG
AAGTAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GGTTTGGATGTGCTGGACCTTACTACTCTACTCGGAGGGCATTCAATGGGCAAGACCAACTGCAGCTTCATCGCGGACCGGCTGTACAATTTCAACAAAACTGGCAAGCCAGACCCAAGC
ATGGACTCATCCTTCTTGGCCCTGATGAGGGAGCAATGCCCACCGAACTCTAAGAACCAAGTGTACCTTGACCCTGATTCAGGCTCCAACTACAGCTTCAGCAAGTCATTCTACTCCAGG
GTCTTGAACCACCGTGCCGTCCTCAGCATCGACCAGCAGATCGCTGCCAACAACGACAGCTCCCAGATCGCTGAGGAGTACAATGCCAGTTTTGAGGACTTCTGGAAGATGTTGGCCCTA
TCGATGAGCCAGATGGGGAACATCAAGGTCTTGACGGGGAAGCAGGGGGAGATTCGCAAGAATTGCCGAGTCGTGAACGGGAAGTAA

Retrieve as FASTA