Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
334 (312) |
PWM (Da): |
36820.56 (34355.4) |
Transmb domain: |
o289-308i425-447o473-495i661-678o |
PI (pH): |
7.22 (6.74) |
Peptide Signal: |
cut: 23 range:23-334 |
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Sequence
Send to BLAST
Send to Peroxiscan
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MRSSMWWQLL LSMLALVSSC AARRIQAEAT IELPPPLQWQ FYQNSCPDAE KYVRDQVEFY WKQDRTLAPK LIRIVYSDCF VKGCDASVLL DGPDSEKTAP QNAAFLGLTL EVIDKIKEVL
EQHCPGVVSC ADIINLAARD AVVLAGGTSY PVPTGRRDGN SSTAKSVDLP LQAVSWGSVV PYFQEKGLDV QDLTTLLGGH SLGKTGCQFV ADRLYNFNKT GKPDPSVDPS FLSQLREQCP
PNSTNQVYLN PDSGSSYSLG KTFYSRVLNH RAVLGIDQQI AANNDSYQIA QRYDASFEDF KKMFGRSMTR LGLVKLLPGD QGEVRKNCRV VNAK
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Retrieve as FASTA
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Remarks |
Complete sequence from genomic. containing motif ysdc
scaffold_1_267 (8061..9666).
Paternal (g18937.t1): NKTGKPDPSVDPS |
Promoter►
Send to BLAST
Send to cis Analysis
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Terminator +►
Send to BLAST
Send to cis Analysis
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATCCCAACCA AGATCAAATG ATGTCACAAT TGTTAAGTCG ATGATGACAT CTTGGGGTCA TAAATAATGA AAAGAAAGCG AGGCACGAAG AATAATGAAA GTGGTCCTAT TATTATTGTT
AGTAACCTAG TTGTTTCGCC TTATGAACAA TTAAAGAAGC CACATAATAT CAATCAATTC GGCAAATAAA ACAATTTTGT GAAGAGCTTT GCTTACAATT CATCGTGCCA TCGGGCCAGC
TTGAGCAATG AAACACCGTT TAAAGACCGG GGACGTAAAT TTAATCATCT GTACACATTC TCGGACAAGT AAAGCCTACT TTCTCGCTCG CGCAATTGAA CCAAAAAAGC TTCTGGCAAG
CCATTACAAT GAATGGCCAA AGGTTTAGCG ACAAAGAAAA CTTGAATGGC CAAAGATTTT CACTTGCTAC CATTGTGCCT CCCCACTTTT CTTCTTTTTC TTTTTTTGTC TTCTTCTTCT
CTCTCTCCTC CTTCTCCTTT TTCCCCACGT TCCCTCCCTT TTCTCTGCCA TCCATCCCGA GAAAATATTA GGTACCCTCA AAGGACCACG TCATCCGTGC TCTGATCCAT TCACGCGTCG
ACACCTGTCC GCTGGCAGGT CCACGTCGGC TCCCTCTTCT CTCTCAGGTC GTTCTAATTT AAACCAACGC GCGGGCATTT AAAAAACCGG AAAGGGAATT CTCTCTCCTC TTTACTCTCT
CTTCCTCCTC CGACGCTCCT TCCGGTCTAG CGATTCCTCC GACGACCGTC GCTCCCTCCC GACGACGGCC TTTCTCTCTC CACTCGACGG CCTCATCTCA GCAGGGCTCC ATTCTCTCGG
CGCACTTCCT CCTAAATCGC GCTCTCTCCC GACGGCCGAT TTCGCTCGCC TCTCTCCGTC CCCCGACTCG CGACCGAGAA GCAATCGCTC CGCCCTGCTC GAAGCAGTCG CTCGAGAAGC
CCTAAATCTG CGACCGCAAG TCAGGTTCGA TTTTATTTCC CGAGTTTTTA TGTTCGCATC TTTGTTTTGG GGGTGAAAGC TTGGCCTAAA TCTGCGATCA GAAGTTCACT GGTTTATTGC
TTCTGATTCT AAGCGCAGCA ACGCGAGAAG TGAAACTGTG ACTGTCTGTC TCTCTACCCT TGTCCGGTTT TTCCGTTCTT GGCAAATCCG AAGATGAGCC CACTTCTGGA TACATGATCT
TAGGCCGACC CGTCAAGTCG AAGCCCGACG TAATCTCGAT GCTTCGCTCC ACCGAGCTGT TGAATCGCTT GTGTCCGGGG GGTTTCAAGA TTTTCCGGGG AGGCAATCGC CTGTTTCGTC
ATTGCAGACT TCCAGACGAG AAGAAATGTG CCCACAATAA TCACCCCAAC ACCGAACCGC CTCCTTTGTC CTCTCTCGGT ATGTCGTCAT CCCTTCTCCG CTTTCGTTTT TTCATTCGTC
GTTTGGTTTC AGGAAGTGGT GGGGATGTTA TAAGTAAAAG AAAGGAATCG GGCCGTGAGG TTTCGCCTGA ATTGTGAGAG ATTAACGCGG GAGTGGTCGA CCCCACGTCC CGTATATGGC
GAACGGTATG ATTTTTGAAT GAAAGCGGGT TCGCATGAGC TATGAGCGTT GGTGGGGAAC GAGCAAGAAA GTGGGTTTTG CTGAAAATTT TGATCTTGTT GAAGTTGGAT TTAAGGGTAG
GGATTTTCTT GGATTTTGGG CTCTCTCCGT CTTTCTTGGT CGCGCGATCA CGATCTTATG CGTGGAAATA CTTGTGTTGA TCCGTTCTTT TCTTTCAGTG GGACTTTGAT TGTGTATTTT
CCCTTTGGAA ATTGTGACTG GACTTTCGAT TATATGTCCC TCCGCAAGCT GAACTGTGGA CCCAATTTTG CCGCACGAAG TGGACTTTTA GATCAGGCTG CCGTAACAAA ATCATACATG
GGTATCTATT TGTCTCGATT ATTGACAAGT TGGGAGTCAC GGCATTTCTG TTTGTTGAAA GCTAGTTAAT CTTAGATGCT
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Retrieve as FASTA
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DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGAGATCAT CGATGTGGTG GCAGCTTTTG CTATCCATGC TCGCCTTGGT GAGCTCATGC GCGGCACGGC GCATCCAGGC AGAGGCGACG ATCGAGCTGC CGCCACCATT GCAGTGGCAG
TTCTACCAGA ACTCGTGCCC CGATGCCGAG AAGTATGTGA GGGACCAGGT CGAGTTCTAC TGGAAGCAGG ACAGGACCCT CGCTCCCAAG CTCATCCGAA TTGTCTACTC CGACTGCTTC
GTCAAGGTCC GTACTGTCTG TTTCTTTTCC CCCGCTCTCG AACGATCTTG AAGTTTGCAT TGCTTCGATA TCGAGTTTCC ATTGCCTTTC TAAGCACGTG ATATCCTTTC ACCTAACGTT
TAAACCTCTC GAACCGGGCT TTCTAATGTA CCACGCTTTT GTGTATGAAA CAGGGGTGCG ATGCGTCGGT TCTATTGGAC GGGCCAGATT CAGAGAAAAC AGCACCACAA AATGCAGCGT
TTCTAGGGCT TACGTTGGAG GTGATTGACA AGATCAAGGA AGTCCTGGAG CAGCATTGTC CCGGGGTTGT CTCTTGTGCT GACATTATCA ACCTCGCTGC TAGAGATGCT GTTGTCTTGG
TATGCAACAT GATTCGCAGT TTTTCCTTTT TGAGCTTGAA AAGGGATCGT TTGGTCTGCA CTGCTGATAA TCACTATGCT GTTAGCTTGA GTTTTTGGAG CGTTGGATAT GGCAAAAGAT
AAAAACAGAA TTACTGATGC GATAATGATG TTGTAATAGG CGGGAGGGAC GTCGTACCCC GTTCCGACCG GGAGGAGGGA CGGGAATTCA TCCACTGCAA AGTCAGTGGA CTTACCGTTG
CAAGCCGTCT CGTGGGGATC GGTGGTCCCT TACTTCCAAG AAAAGGGCTT GGATGTGCAG GACCTCACCA CTCTACTTGG TACGATCCGA ACCTCCCATG AAAACTGCTT ATTTGGCTCC
GTTACATTAC CTTTAGATCG TAACCAATCC AGGCGAATCG TTCAGTTCAA TGAATCATGA CGTCCCTTTT CGCTTTCGAG TTTTCTAAAT CACTGCCTAG GTGTCATGAT ACAAAGAATT
CTTCTGACAG TGATCTCCTC CAAGCGCACA AAATGGCATT GCTCACGTAT TATGTTAATC TCTCGATCAT AACCAATTCC TCCTAACTTT GCCAAAACAA TTTAAATTTT GACAGGGGGG
CATTCACTGG GCAAGACCGG CTGCCAATTC GTCGCGGACA GGCTGTACAA TTTCAACAAG ACCGGCAAGC CAGACCCAAG CGTGGACCCA TCCTTTTTGT CCCAATTGAG GGAGCAATGC
CCACCAAACT CAACGAACCA AGTGTACCTT AACCCTGACT CAGGCTCGAG CTACAGCTTG GGCAAGACCT TCTACTCCAG GGTCCTGAAC CACCGGGCCG TCCTAGGCAT CGACCAGCAG
ATTGCCGCCA ACAACGACAG CTACCAGATC GCTCAGAGGT ACGATGCCAG TTTCGAGGAC TTCAAGAAGA TGTTCGGCCG GTCAATGACC CGGCTGGGGC TCGTCAAGCT CCTTCCGGGG
GATCAGGGGG AGGTTCGCAA GAATTGCCGA GTCGTGAATG CGAAATAA
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGAGATCAT CGATGTGGTG GCAGCTTTTG CTATCCATGC TCGCCTTGGT GAGCTCATGC GCGGCACGGC GCATCCAGGC AGAGGCGACG ATCGAGCTGC CGCCACCATT GCAGTGGCAG
TTCTACCAGA ACTCGTGCCC CGATGCCGAG AAGTATGTGA GGGACCAGGT CGAGTTCTAC TGGAAGCAGG ACAGGACCCT CGCTCCCAAG CTCATCCGAA TTGTCTACTC CGACTGCTTC
GTCAAGGGGT GCGATGCGTC GGTTCTATTG GACGGGCCAG ATTCAGAGAA AACAGCACCA CAAAATGCAG CGTTTCTAGG GCTTACGTTG GAGGTGATTG ACAAGATCAA GGAAGTCCTG
GAGCAGCATT GTCCCGGGGT TGTCTCTTGT GCTGACATTA TCAACCTCGC TGCTAGAGAT GCTGTTGTCT TGGCGGGAGG GACGTCGTAC CCCGTTCCGA CCGGGAGGAG GGACGGGAAT
TCATCCACTG CAAAGTCAGT GGACTTACCG TTGCAAGCCG TCTCGTGGGG ATCGGTGGTC CCTTACTTCC AAGAAAAGGG CTTGGATGTG CAGGACCTCA CCACTCTACT TGGGGGGCAT
TCACTGGGCA AGACCGGCTG CCAATTCGTC GCGGACAGGC TGTACAATTT CAACAAGACC GGCAAGCCAG ACCCAAGCGT GGACCCATCC TTTTTGTCCC AATTGAGGGA GCAATGCCCA
CCAAACTCAA CGAACCAAGT GTACCTTAAC CCTGACTCAG GCTCGAGCTA CAGCTTGGGC AAGACCTTCT ACTCCAGGGT CCTGAACCAC CGGGCCGTCC TAGGCATCGA CCAGCAGATT
GCCGCCAACA ACGACAGCTA CCAGATCGCT CAGAGGTACG ATGCCAGTTT CGAGGACTTC AAGAAGATGT TCGGCCGGTC AATGACCCGG CTGGGGCTCG TCAAGCTCCT TCCGGGGGAT
CAGGGGGAGG TTCGCAAGAA TTGCCGAGTC GTGAATGCGA AATAA
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Retrieve as FASTA
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