Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
435 |
PWM (Da): |
49792.85 |
|
PI (pH): |
7.19 |
|
Sequence
Send to BLAST
Send to Peroxiscan
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
GPILLDDYHLVEKLANFDRERIP*GVVHARGACAKGFFEVTHDISHLTRADFLQAPGVQTPVTVRFSILIQERGSPETLRDPRGSGVNFYTREGSFDLVGNNFPIFICDGMKFPDMVCAL RPNPKSRIQENWRILDFFFHHPESLRLFTFLFDDIGSAQDYRHMQGSGVNTYTLINKARKAHHVKFHWKPTCGxKSLLEAEAIRVGGSNHSHATQDFxDSIAAGNYPEWKLFVQIVSPDH EDNFNFGPIDVAKTWPKDILDNFFAENEQLAFCPSMVVPSIYDSDDKLLQTRIISYSDTRRHHLGPNYPPPPLPFPPNTPKCAHHNNHPEGFTNFMHRDEEINYFPSRYDPVRHAERYPI PPAMLTGKLEKIIEKENNFKQLGERFQSWAPDREWFICR*INALSNP*VTREIRNLWISYWSQVRKPFTSCLVMMGLE |
Retrieve as FASTA
|
|
Remarks |
Pseudogene from genomic (Stops in frame; PS is missing; 5' end is missing). Incorrect prediction from kazusa. |
DNA ►
Send to BLAST
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
GGTCCAATTCTTCTTGATGATTATCACCTTGTGGAGAAACTTGCCAACTTTGATAGGGAGAGGATTCCATAGGGTGTTGTCCATGCCAGGGGAGCCTGTGCAAAGGGATTCTTTGAGGTC ACTCATGACATTTCTCACCTTACCCGTGCTGATTTCCTTCAGGCACCAGGAGTTCAAACACCTGTGACTGTCCGTTTCTCCATCCTCATCCAAGAAAGGGGCAGCCCTGAAACCCTGAGG GACCCCCGGGGTTCAGGTGTGAACTTCTACACGAGAGAGAGGTGAGGGTCGTTTTGGTAGTAGACATGAATGTGCAGTATGGACGGGCATGAATATGATTCTCCCTGTGACGAATCCTTT CACGGGTGGCCTAAACTCGACCGATGCATATGGTAGTTCTCTTTCCACACTGCATACATTTGTTTTGTTGCACTTTGCTATGTGATCTTACCTTTTCTGTTACTGCAGGGTAGCTTTGAT CTGGTAGGAAACAATTTCCCTATCTTCATCTGCGATGGGATGAAATTCCCGGATATGGTTTGTGCACTTAGACCAAACCCCAAATCCCGCATCCAGGAGAACTGGAGGATCCTTGACTTT TTCTTCCACCATCCCGAGAGCTTGCGCTTGTTCACCTTCCTCTTTGATGATATTGGTAGTGCACAAGATTACAGGCACATGCAGGGCTCTGGAGTTAACACCTACACTTTGATCAACAAG GCCAGAAAAGCGCATCATGTGAAGTTTCACTGGAAACCAACTTGCGGATCNAAGAGCTTGCTGGAGGCAGAGGCAATTAGAGTCGGGGGATCCAATCACAGCCATGCAACTCAGGATTTT GTNGATTCCATTGCTGCTGGAAACTATCCTGAATGGAAACTTTTCGTTCAGATCGTCAGTCCTGATCATGAAGACAACTTCAACTTTGGCCCAATTGATGTGGCTAAGACCTGGCCCAAG GACATATATTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATAAC TTCTTTGCTGAGAATGAACAGCTTGCATTTTGCCCTTCAATGGTAGTTCCCAGCATTTACGATTCGGATGATAAGCTGCTCCAAACTCGTATCATCTCATATTCTGATACACGGAGGCAC CATCTTGGACCAAATTTTATCATCAATTCCCAACCACCCCACCCCCCCCCCCCCCCTTCCTTTCCCCCCCAATACTCCTAAATGCGCTCATCACAACAATCACCCTGAAGGTTTCACGAA TTTCATGCATAGGGATGAAGAGAGGTAAGAACCGTCTTTGAATACTTCAGCAGCGATGCTCTGGGCACCATCTCTTGTGGATTTTTTGTTGATGTAACTAGACATCGTGCTTTCCTATAA GCATGTAGGCGTTGTGATGCAATCTGACATGTCAATTGCGGATCCTAAAGTGGCAGTGCGAATGTCCTCCCTCCTTTTGAGGAAGATTACTTTCTTAATTTTGCAAATGCACTTTGTACC TGAAACATACATACATGTTTACATATGTAGGAAATGCCTGTCTGCTATTATGTAAAATGATTATCTGTTGAGCAAATGCTTAATTTCCCCGTTGCAGATAAACTATTTTCCGTCAAGGTA TGATCCTGTTCGTCATGCAGAGAGATATCCCATTCCACCTGCTATGCTGACTGGAAAGCTTGAAAAAAAGGTGTGTTTTTAATTAGGATCTCTTTTACGTAAACAGAGATTGATTGTCTT GAGGTGCTTTCTTGGCGATATCCATGGGATAGACTCAGCTTGTCCTAGATGATCAATTGAATTGCAGTGAGTAGTGTGACTGATGTATGTGTTTGGATTTTGTTTACTTTTGTTGCTCCA AACAGACCATCATTGAGAAAGAAAACAACTTCAAGCAGCTCGGAGAGAGATTCCAATCGTGGGCACCCGACACAGGTATCTTCAGTTGTTCATTTCCTGAAAATAGTTTGATTGTCTCAT GTTTCTCAATCGTCTGTCTCTGTTTTCATTTTTCAGGTAAGAGTGGTTCATCTGCCGATAGATCAATGCTTTATCTAACCCCTGAGTGACTCGTGAGATCCGCAACCTCTGGATTTCATA CTGGTCTCAGGTGAGAAAGCCATTTACTTCTTGTCTAGTGATGATGGGGTTGG |
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
GGTCCAATTCTTCTTGATGATTATCACCTTGTGGAGAAACTTGCCAACTTTGATAGGGAGAGGATTCCATAGGGTGTTGTCCATGCCAGGGGAGCCTGTGCAAAGGGATTCTTTGAGGTC ACTCATGACATTTCTCACCTTACCCGTGCTGATTTCCTTCAGGCACCAGGAGTTCAAACACCTGTGACTGTCCGTTTCTCCATCCTCATCCAAGAAAGGGGCAGCCCTGAAACCCTGAGG GACCCCCGGGGTTCAGGTGTGAACTTCTACACGAGAGAGGGTAGCTTTGATCTGGTAGGAAACAATTTCCCTATCTTCATCTGCGATGGGATGAAATTCCCGGATATGGTTTGTGCACTT AGACCAAACCCCAAATCCCGCATCCAGGAGAACTGGAGGATCCTTGACTTTTTCTTCCACCATCCCGAGAGCTTGCGCTTGTTCACCTTCCTCTTTGATGATATTGGTAGTGCACAAGAT TACAGGCACATGCAGGGCTCTGGAGTTAACACCTACACTTTGATCAACAAGGCCAGAAAAGCGCATCATGTGAAGTTTCACTGGAAACCAACTTGCGGATCNAAGAGCTTGCTGGAGGCA GAGGCAATTAGAGTCGGGGGATCCAATCACAGCCATGCAACTCAGGATTTTGTNGATTCCATTGCTGCTGGAAACTATCCTGAATGGAAACTTTTCGTTCAGATCGTCAGTCCTGATCAT GAAGACAACTTCAACTTTGGCCCAATTGATGTGGCTAAGACCTGGCCCAAGGACATATNNGATAACTTCTTTGCTGAGAATGAACAGCTTGCATTTTGCCCTTCAATGGTAGTTCCCAGC ATTTACGATTCGGATGATAAGCTGCTCCAAACTCGTATCATCTCATATTCTGATACACGGAGGCACCATCTTGGACCAAATTCCCCCCCCCCCCCCCTTCCTTTCCCCCCCAATACTCCT AAATGCGCTCATCACAACAATCACCCTGAAGGTTTCACGAATTTCATGCATAGGGATGAAGAGATAAACTATTTTCCGTCAAGGTATGATCCTGTTCGTCATGCAGAGAGATATCCCATT CCACCTGCTATGCTGACTGGAAAGCTTGAAACCATCATTGAGAAAGAAAACAACTTCAAGCAGCTCGGAGAGAGATTCCAATCGTGGGCACCCGACTAAGAGTGGTTCATCTGCCGATAG ATCAATGCTTTATCTAACCCCTGAGTGACTCGTGAGATCCGCAACCTCTGGATTTCATACTGGTCTCAGGTGAGAAAGCCATTTACTTCTTGTCTAGTGATGATGGGGTTGG |
Retrieve as FASTA
|
|