Entry information : EcamPrxQ01 ( EcS771313.10)
Entry ID 10633
Creation 2012-02-29 (Qiang Li)
Last sequence changes 2013-02-06 (Qiang Li)
Sequence status complete
Reviewer Achraf Jemmat
Last annotation changes 2016-02-05 (Achraf Jemmat)
Peroxidase information: EcamPrxQ01 ( EcS771313.10)
Name (synonym) EcamPrxQ01 ( EcS771313.10)
Class Atypical 2-Cysteine peroxiredoxin (type Q)    [Orthogroup: PrxQ001]
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus camaldulensis    [TaxId: 34316 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EcamPrxQ01
start..stop
S start..stop
EgrPrxQ01 577 0 1..298 1..296
EguPrxQ01 516 0 1..298 1..296
EglPrxQ01 515 0 34..298 5..268
PtPrxQ01 338 1.4e-118 85..297 1..212
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '10633' 'join(1..100,274..619,719..949,1167..1386)' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1..100 98 N° 2 274..619 344 N° 3 719..949 229 N° 4 1167..1386 218
join(1..100,274..619,719..949,1167..1386)


exon

Literature and cross-references EcamPrxQ01 ( EcS771313.10)
EST ref. GenBank:   FY806075.1 [5' end]  FY798588.1 [3' end]
Protein sequence: EcamPrxQ01 ( EcS771313.10)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   298 (294)
PWM (Da):   %s   32620.06 (31696.1) Transmb domain:   %s   i58-80o
PI (pH):   %s   10.73 (8.57) Peptide Signal:   %s   cut: 30 range:30-323
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MSLSSDNLAAYWAGQARPTEDLVQSVQFRRSGRRRRRRSATLADPVPSRGAQHSSKRIICLLFSLIFLGPFFFxPSSALVLSSTMATLSLPKHSLRSLLPPQTPRTQSPRTPTFLPKSTQ
SQFHGLKLSNSSSPSVPSSFSAKSTVFAKVNKGQAPPAFTLKDQDGKTVSLSKFKGKPVVVYFYPADETPGCTKQQACAFRDSYEKFKKAGAEVVGISGDDSSSHKAFAKKYRLPFTLLS
DVGDKVRKDWGVPSDLFGALPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLQSA

Retrieve as FASTA  
Remarks Partial sequence from genomic (3 introns) and 4 ESTs. Incorrect prediction from kazusa (5' end is missing due to the ending of contig, complete 3' end with short PS). One intron is missing compared with other Eucalyptus species.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCTCTCTCGAGTGATAACTTGGCGGCCTACTGGGCCGGTCAGGCCCGGCCGACCGAGGATCTGGTCCAGTCGGTCCAGTTTCGCCGGTCAGGTCGAAAAGCCCCGCTCCCTCGAAAC
GAAGGCCGGATGGTGTCGTGCCGCGAAGGGCCAGCAATCGTCCACGCCACGAACGACATTGGAAAAGCCAATGAACGACCGCTCCACCTTATCTTTCTTTTCCCCACCACCCGACCAAAA
ACCCGATAACCAAAAAAAAAAAAAAAAAAACAGAGGAAGAAGAAGAAGAAGCGCAACGCTTGCTGATCCGGTCCCAAGCAGAGGCGCACAGCACAGCAGCAAAAGAATAATCTGTTTGCT
TTTTTCTCTTATTTTTCTTGGGCCTTTCTTTTTTTCNCCTTCATCTGCTCTGGTTCTGAGCTCAACGATGGCCACGCTTTCCCTCCCGAAGCACTCCCTCCGGTCTCTGCTCCCACCTCA
GACGCCCAGAACCCAATCTCCCCGGACCCCAACGTTCTTGCCCAAGTCGACGCAGTCTCAGTTCCACGGCCTTAAGCTGTCCAATTCCTCCTCTCCCTCCGTCCCTTCTTCCTTCTCCGC
CAAGAGCACCGTCTTTGCCAA
AAGGTACATTGTCCCACGTCCAGAGATTTGGAGGCATTTGGAGGGCTAAGCCAAGAGGGTTATTAATGTCTTCCCGTTTCTGTTTGTGGAAACTTCCTG
CAGGTGAACAAAGGCCAAGCCCCGCCAGCCTTCACGCTGAAGGATCAGGACGGCAAGACCGTGAGCCTCTCTAAGTTCAAGGGCAAGCCCGTCGTCGTCTATTTCTACCCTGCTGACGAG
ACGCCAGGATGCACCAAGCAGCAGGCCTGCGCTTTCAGGGATTCTTATGAGAAGTTCAAGAAAGCAGGAGCTGAGGTGGTTGGAATCAGTGGGGACGACTCGTCTTCGCATAA
AAGGTAT
TGGACAAAGTTCACCTGTTTCCTGTAATTGATTATGTGTTTGCATCATTTGAGCTTTTGGAAAATTAATGCTGAAAGCTGTAGGAACAAGTGATAGATTTGTAGGAATGTTTAAGTCTTT
CAGGGTACATGTTTAATGAAACTGCAATACTCGGATTTTGCACCAAAATGCTAATGTTTCGCTGCTGACAATGAGTTTCATTGTTAACGTCAGGCATTCGCCAAGAAGTATAGACTTCCA
TTCACATTGCTCAGCGATGTCGGGGATAAGGTCAGGAAAGATTGGGGAGTCCCCTCGGATTTATTTGGGGCATTGCCTGGAAGACAGACTTACGTACTCGACAAGAATGGTGTGGTTCAG
CTCATTTACAACAACCAATTCCAACCTGAGAAGCACATCGACGAGACCTTGAAGTTCCTTCAGAGTGCCTGA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCTCTCTCGAGTGATAACTTGGCGGCCTACTGGGCCGGTCAGGCCCGGCCGACCGAGGATCTGGTCCAGTCGGTCCAGTTTCGCCGGTCAGGTCGAAGAAGAAGAAGAAGAAGCGCA
ACGCTTGCTGATCCGGTCCCAAGCAGAGGCGCACAGCACAGCAGCAAAAGAATAATCTGTTTGCTTTTTTCTCTTATTTTTCTTGGGCCTTTCTTTTTTTCNCCTTCATCTGCTCTGGTT
CTGAGCTCAACGATGGCCACGCTTTCCCTCCCGAAGCACTCCCTCCGGTCTCTGCTCCCACCTCAGACGCCCAGAACCCAATCTCCCCGGACCCCAACGTTCTTGCCCAAGTCGACGCAG
TCTCAGTTCCACGGCCTTAAGCTGTCCAATTCCTCCTCTCCCTCCGTCCCTTCTTCCTTCTCCGCCAAGAGCACCGTCTTTGCCAA
GGTGAACAAAGGCCAAGCCCCGCCAGCCTTCACG
CTGAAGGATCAGGACGGCAAGACCGTGAGCCTCTCTAAGTTCAAGGGCAAGCCCGTCGTCGTCTATTTCTACCCTGCTGACGAGACGCCAGGATGCACCAAGCAGCAGGCCTGCGCTTTC
AGGGATTCTTATGAGAAGTTCAAGAAAGCAGGAGCTGAGGTGGTTGGAATCAGTGGGGACGACTCGTCTTCGCATAA
GGCATTCGCCAAGAAGTATAGACTTCCATTCACATTGCTCAGC
GATGTCGGGGATAAGGTCAGGAAAGATTGGGGAGTCCCCTCGGATTTATTTGGGGCATTGCCTGGAAGACAGACTTACGTACTCGACAAGAATGGTGTGGTTCAGCTCATTTACAACAAC
CAATTCCAACCTGAGAAGCACATCGACGAGACCTTGAAGTTCCTTCAGAGTGCCTGA

Retrieve as FASTA