View Redoxidase 10702

Entry information : JargCcP

Entry ID	10702
Creation	2012-03-05 (Christophe Dunand)
Last sequence changes	2012-03-05 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2012-04-06 (Catherine Mathe (Scipio))

Peroxidase information: JargCcP

Name

JargCcP

Class

Cytochrome C peroxidase [Orthogroup: CcP001]

Taxonomy

Eukaryota Fungi Basidiomycota Agaricomycetes Jaapiaceae Jaapia

Organism

Jaapia argillacea [TaxId: 202697 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	JargCcP start..stop	S start..stop
GtraCcP	593	0	1..375	1..374
NlepCcP01	580	0	1..376	1..375
PoCcP_PC9	578	0	1..375	1..372
SlacCcP01	566	0	1..375	1..371

Gene structure Fichier

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	489162..489467	304	N° 2	489059..489107	47	N° 3	488927..489008	80	N° 4	488713..488866	152
N° 5	488540..488656	115	N° 6	488467..488483	15	N° 7	488346..488411	64	N° 8	488210..488287	76
N° 9	488073..488144	70	N° 10	487916..487999	82	N° 11	487725..487833	107
complement(join(487725..487833,487916..487999,488073..488144,488210..488287,4883 46..488411,488467..488483,488540..488656,488713..488866,488927..489008,489059..4 89107,489162..489467))

Literature and cross-references JargCcP

DNA ref.	JGI genome: scaffold_16 (489467..487725)
Cluster/Prediction ref.	JGI gene: 37172

Protein sequence: JargCcP

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	377
PWM (Da):	41796.8
PI (pH):	7.05

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MSFSMLRAPVCKAAFSTPSVSQFALRNQFRRFATGPASSEPVKSGGKSWLIGGGLLAFGGVGYYLYSTNPDLFKEAGTAAKSSVQAAKVATKFTPAQEDYQKVYNKIVQLVEDAGDYDDG
SYGPVLVRLAWHASGTYDKETGTGGSNYATMRFEPEAKHGANNGLNIARDIMEGVKKEFPWISYGDLWTLGGVCAIQEMSGPKIPWRPGRIDGFATEATPDGRLPDASQGADHLRSIFYR
MGFNDQEIVALSGAHALGRCHTDRSGFDGPWTFSPTTVTNDYFKLLFDERWIWKKWSGPKQLVDKKTGTLMMLPTDYVLTQDKSFKKFAKAYADDQDLWFKDFSKAVSTLFELGVPTQQF
VSSEPWILKTKEEQEEK*

Retrieve as FASTA

Remarks

Complete sequence from genomic (10 introns).

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGTCGTTCTCCATGCTCCGAGCTCCTGTTTGCAAGGCCGCTTTTTCTACGCCCAGCGTCTCTCAGTTCGCTCTGCGCAACCAGTTCCGTAGATTTGCGACTGGACCTGCTTCCTCCGAG
CCCGTGAAATCTGGGGGCAAGTCTTGGTTGATTGGAGGGGGGTTATTGGCCTTTGGTGGTGTTGGGTATTATCTTTACTCCACCAATCCCGACTTGTTCAAGGAGGCGGGTACTGCTGCC
AAGTCGAGTGTTCAGGCTGCGAAAGTGGCTACGAAATTCACTCCCGCTCAAGAGGACTACCAGAAGGTTCGGACGACTTTGTCCGATATGCCTGGCGACACGAGCTGATAAAACTTCCAG
GTGTGTATAACAAGATCGTTCAGCTTGTTGAGGACGCTGGCGATTACGATGGTACGTCGAGTGCATTTTACCCTCCGGAAGACAACTAACAAAGACACTAGACACGGCTCTTATGGTCCC
GTGCTCGTCCGCTTGGCCTGGCACGCCTCTGGTACTTACGACAAGGAAACTGGCACTGGTGGAAGGTATGCCTCATAATCTCTGCTCCTAACATGTTACACTATCTTATCGCTTGCCTCT
TGTAGCACAACTACGCAACTATGCGTTTCGAACCCGAAGCTAAACATGGTGCTAACAACGGCTTGAACATCGCTCGCGACATCATGGAAGGCGTCAAGAAGGAATTCCCTTGGATTAGCT
ATGGTGACCTTTGGACTCTCGGCGGTGTTTGCGCTATTCAGGTGACTTCTGTCCCCAACTATCTCGTATCATCTAGTTCTGATGTATCTTTTCGTAGGAGAAATGTCAGGACCTAAGATC
CCTTGGAGACCTGGACGAATTGACGGTTTCGCTACTGAAGCTACCCCCGATGGTCGTCTTCCCGACGCTTCCCAAGGCGCTGACCATCTCAGGAGTGTAAGCAATTCACCTCATATTCCC
CTAATACCAACTCAACACCCCCTTTCCTTCAGATATCTTCTACCGCATGGGGTTCGTTCTCCCCGTATTTCGTCAACGAATAATGGTACTAAGAAAGAACACCTAGCTCTTCAACGACCA
AGAAATCGTCGCTCTCTCAGGCGCTCACGCTCTCGGACGTTGCCACACTGACAGGTGGGCATCATCTATCTTCGCGATCCCCGTCAAAGACTGATGATCCCTACCTTTTAAGATATCTGG
ATTTGATGGACCCTGGACTTTCTCGCCTACCACCGTGACTAACGATTACTTCAAACTCCTTTTCGACGAGAGGTACCTTGTTTTAGTCTTGTCATAGTACGCTGCGCGCTCTAGGTGTTG
ATGGTTTCGGTGTGCAGGTGTGGATCTGGAAGAAATGGAGCGGCCCTAAACAACTTGTGGATAAGAAGACTGGTACTTTGATGATGTTGCCGTGCGTCACGCTTTTCGTATTCTCCTACC
TGTGCTGCGTTGTTAACTCGAAATGCATCGTCGTTGCACTCTAGTATACCGACTACGTACTCACCCAGGACAAGAGCTTCAAGAAATTTGCCAAGGCCTACGCAGATGACCAAGACCTCT
GGTTCAAGGAGTACGTCCACTCTCTTACCCTTACTCCCTTCATTCCCTTTCCACACTAAATACATACTGACCATCCTCCGCCTCCTTATTAGCTCTTCTCCAAAGCCGTCTCCACCCTCT
TCGAACTTGGCGTCCCCACTCAACAATTCGTCTCTTCCGAGCCTTGGATCTTAAAGACGAAGGAGGAACAAGAAGAGAAATAG

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA