Entry information : EglPrx[P]159
Entry ID 10978
Creation 2012-05-15 (Qiang Li)
Last sequence changes 2013-02-06 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2012-05-15 (Qiang Li)
Peroxidase information: EglPrx[P]159
Name EglPrx[P]159
Class Class III peroxidase     [Orthogroup: Prx007]*
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus globulus    [TaxId: 34317 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EglPrx[P]159
start..stop
S start..stop
EgrPrx[P]159 288 2.51e-100 1..172 1..240
EcamPrx[P]159 276 1.2e-95 2..170 1..246
EguPrx[P]159 266 7.86e-92 1..172 1..242
EcamPrx[P]160 228 1.52e-76 2..144 5..235
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '10978' 'join(1..194,307..346,383..456,484..824)' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1..194 192 N° 2 307..346 38 N° 3 383..456 72 N° 4 484..824 339
join(1..194,307..346,383..456,484..824)


exon

Literature and cross-references EglPrx[P]159
Protein sequence: EglPrx[P]159
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   172 (231)
PWM (Da):   %s   18132.89 (25024.8)  
PI (pH):   %s   4.28 (8.96) Peptide Signal:   %s   cut: 26 range:26-256
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
QGCNASVLLDGSTSEPSEQDTPCGRVVSCADIATIAAHDSIFLSGRPEYDVPLGRRENLPSPTQSASQILAALAKKSFDTTTNRLYPTPDPTMEKSFARACxPDQYEDPTTRDIVTSFAK
DLELFFERFVLAMTKMGQLGLLTGxxxxSPLLGQEFLEMLFPDDPKYLCPSK

Retrieve as FASTA  
Remarks Pseudogene from NGS. 5' and PS are missing due to NNNN.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
CAGGGATGCAATGCTTCGGTGTTGCTGGATGGATCAACGAGTGAACCGAGCGAGCAGGACACCCCATGTGGTCGGGTAGTCTCTTGTGCTGACATCGCCACCATCGCCGCTCACGATTCC
ATTTTCTTGGTAAACCCCCCTCAGCCTGTTTTGATTATAAGCTTTATGTTCTTTCAAGTTGGATTTCTTTATCG
CGGGGATTAATTGTAAATAATGTGAGCATGCATAATATACCGTGTG
CAGTCGGGCAGACCTGAGTATGACGTGCCATTGGGAAGGCGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGAGAATTTACCTTCACCAACTCAGAGCGCTCTAGCCAAATTC
TCGCTGCCCTAGCCAAGAAAAGCTTCGACACCACNNNNNNNNNNNNNNNNNNNNNNNNNNTCACCAACCGGCTCTACCCGACCCCAGACCCCACCATGGAGAGAAAAGCTTCGCCCGTGC
ATGTGCNCCCGATCAATATGAGGACCCCACAACGAGGGACATCGTTACTAGCTTTGCCAAGGACCTGGAATTGTTCTTCGAGAGGTTTGTTCTCGCTATGACCAAGATGGGGCAGCTTGG
CCTGTTGACTGGGANNNNNNNNNNAAGCCCGCTGCTCGGTCAGGAATTCCTAGAAATGCTTTTTCCTGATGACCCCAAATATTTATGTCCTTCTAAATAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
CAGGGATGCAATGCTTCGGTGTTGCTGGATGGATCAACGAGTGAACCGAGCGAGCAGGACACCCCATGTGGTCGGGTAGTCTCTTGTGCTGACATCGCCACCATCGCCGCTCACGATTCC
ATTTTCTTGGTAAACCCCCCTCAGCCTGTTTTGATTATAAGCTTTATGTTCTTTCAAGTTGGATTTCTTTATCG
NNNNNNNNCAGAGAATTTACCTTCACCAACTCAGAGCGCTGACACC
ACNNNNNNNNNNNNNNNNNNNNNNNNNNTCACCAACCGGCTCTACCCGACCCCAGACCCCACCATGGA
CGATCAATATGAGGACCCCACAACGAGGGACATCGTTACTAGCTTTGCCAAG
GACCTGGAATTGTTCTTCGAGAGGTTTGTTCTCGCTATGACCAAGATGGGGCAGCTTGGCCTGTTGACTGGGANNNNNNNNNNAAGCCCGCTGCTCGGTCAGGAATTCCTAGAAATGCTT
TTTCCTGATGACCCCAAATATTTATGTCCTTCTAAATAA

Retrieve as FASTA