Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
462 (288) |
| PWM (Da): |
53188.58 (31442.8) |
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| PI (pH): |
7.28 (6.66) |
Peptide Signal: |
cut: 21 range:21-308 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MDPHKYRPSS AFNTSFWTTN SGAPVWNNNS SLTVGSRGPI LLEDYHLVEK LANFDRERIP ERVVHARGAS AKGFFEVTHD ISQLTCADFL RAPGVQTPVI VRFSTVIHER GSPETLRDPR
GFAVKFYTRE GNFDLVGNNF PVFFVRDGMK FPDMVHALKP NPKSHIQENW RIVDFFSHHP ESLHMFTFLF DDIGIPQDYR HMEGSGVNTY TLINKAGKVH YVKFHWKPTC GVKNLLEEEA
IRVGGSNHSH ATQDLYDSIA AGNYPEWKLF IQIIDPDHED KFDFDPLDVT KTWPEDILPL MPVGRLVLNR NIDNFFAENE QLAFCPSIVV PGVFYSDDKL LQTRIFSYSD TQRHRLGPNY
LQLPPNAPKC AHHNNHHEGF MNFMHRDEEI NYFPSRYDPV RHAERYPIPT AMLTGKREKT IIEKENNFKQ PGERYRSWTP DRQADKSLGQ KLASRLNVRP SI
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Retrieve as FASTA
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| Remarks |
Partial sequence from NGS and several ESTS. Short 3' is missing. |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GAGGTCACTC ATGACATTTC CCAGCTTACC TGTGCTGATT TCCTTCGGGC ACCAGGAGTT CAAACACCCG TGATTGTCCG TTTCTCCACT GTCATCCACG AAAGGGGCAG CCCTGAAACC
CTGAGGGACC CTCGAGGTTT TGCTGTGAAG TTCTACACAA GAGAGGTAAG GGAATTTTGG CAACAGATAG AAGTCTGCAG TTTGGAAGAG TACAAGTTTG ATGCTCACTG TGATAGACCC
TTTCACGGGG AGCCTAGGCT CAATCAATGC ATGTGCTATA GATGTGTGGT CAGTAAGAGC TAACTGCTTT TCATATCCCA TTCTGCTGAA GCATGGTTGC ATCTATAAAT TTCAATAGAA
TATACTTGGC TCATTTTTTG ATTAGTACCT ATCTACTAAG AGACATCATA TTAATAATTG CTGCTATGGT ATTGAATCCA CTTTGACACT TGAATTGGGG AGATGGCAGG TCTCTTGTAC
ACATTGCATA TATTTGTTTT GTGATCTTGC CTTTTCTGTT ACTGCAGGGT AACTTTGATC TGGTGGGAAA CAATTTCCCT GTCTTCTTTG TCCGTGATGG GATGAAATTC CCGGATATGG
TTCATGCACT TAAACCAAAC CCCAAATCCC ACATCCAGGA GAACTGGAGG ATCGTTGACT TTTTCTCCCA CCATCCCGAG AGCTTGCACA TGTTCACCTT CCTCTTTGAT GATATTGGTA
TTCCCCAAGA TTACAGGCAC ATGGAGGGCT CTGGAGTTAA CACCTACACC TTGATCAACA AGGCCGGAAA AGTGCATTAT GTGAAGTTTC ACTGGAAACC AACTTGCGGG GTCAAGAACT
TGCTGGAGGA AGAGGCAATT AGAGTTGGGG GATCCAATCA CAGCCATGCG ACTCAGGATC TTTATGATTC CATTGCTGCT GGAAACTATC CTGAATGGAA ACTTTTCATT CAGATCATCG
ATCCTGATCA TGAAGACAAA TTTGACTTTG ACCCACTTGA TGTGACTAAG ACCTGGCCCG AAGATATATT GCCCCTAATG CCAGTTGGCC GCTTGGTCTT GAATAGGAAC ATTGATAACT
TCTTTGCTGA GAATGAACAG CTTGCATTTT GCCCTTCAAT TGTGGTTCCT GGGGTCTTCT ACTCAGATGA TAAGCTGCTC CAAACTCGTA TCTTCTCGTA TTCTGATACT CAGAGGCACC
GTCTTGGACC AAATTATCTT CAACTCCCCC CCAATGCTCC TAAATGTGCT CATCACAACA ATCACCATGA AGGTTTCATG AATTTCATGC ATAGGGATGA AGAGGTAAGA ATCTTCTTTG
AATCCTGCCG CAGCAATACT CTGGGCAGCA ACTCTGGTGG ATTTTTGGTT GGTGTAACTA AGTTAACATC ACGCTTTCCT TGACATATGA AGGCGTTGTG ATGCAATCTG ACATGTCAAT
TATTGATCCC AAAGTGGCAG TGCAAATGTC CTCTCTCCTT TTGTTGTGTG ACTAGATGTA TGTGTGTTTA CATATGTAGG AAATACCTGT CTGCTATTAT GTAAGAAGAT TATCTGTTGA
GCAAATGCTT ATTTTCCCTT TTGCAGATAA ACTATTTTCC ATCAAGGTAC GATCCTGTTC GTCATGCAGA GAGATATCCC ATTCCAACTG CTATGCTGAC TGGAAAGCGT GAAAAGGTTT
GTTTCCTAGG ATCTCTTTTA CTTGAACAGA AATTGGTTGT CTTGAGGTGC TTTCATGGTG ATATTGATGG GATAGACTCA GCTTGTCCAG TAGATAATCA ATTGAATTGC AGTnnnnnnT
GTGACTAGAT GTATGTGTGT TTGGATTTTG TTAACTTTTG TTGCTCCAAA CAGACCATCA TTGAGAAAGA GAACAACTTC AAGCAGCCTG GAGAGAGATA CCGATCATGG ACACCTGACA
GGTATCCTTC AGTTGTGCAT ATCCTGATAA TGGTTTGATG GTCTCATGTT TCTCAATCAT TTGTCTCTAT nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnGCGGGTT AAAGTGAAAA ATGTAATATT
TAACATGCAG AAATGGGGGA TTCGGTTGTT GCTTGCTTTG TGAGATACAC ACACACACAC ACATGCAGAT GTGATAATGA ACTCATTTGA GATTACTTGC AATTGCAACA GGCCGACAAA
TCTCTGGGTC AGAAATTAGC ATCTCGGCTC AATGTGCGAC CAAGCATTTA A
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGATCCGC ACAAGTACCG TCCATCCAGT GCTTTCAACA CTTCTTTCTG GACTACGAAC TCTGGTGCTC CTGTCTGGAA CAATAACTCT TCGTTGACTG TTGGAAGCAG AGGTCCAATT
CTTCTTGAGG ATTATCACCT TGTGGAGAAA CTTGCCAACT TTGATAGGGA GAGGATTCCA GAGCGTGTGG TGCATGCCAG AGGAGCCAGT GCAAAGGGAT TCTTTGAGGT CACTCATGAC
ATTTCCCAGC TTACCTGTGC TGATTTCCTT CGGGCACCAG GAGTTCAAAC ACCCGTGATT GTCCGTTTCT CCACTGTCAT CCACGAAAGG GGCAGCCCTG AAACCCTGAG GGACCCTCGA
GGTTTTGCTG TGAAGTTCTA CACAAGAGAG GGTAACTTTG ATCTGGTGGG AAACAATTTC CCTGTCTTCT TTGTCCGTGA TGGGATGAAA TTCCCGGATA TGGTTCATGC ACTTAAACCA
AACCCCAAAT CCCACATCCA GGAGAACTGG AGGATCGTTG ACTTTTTCTC CCACCATCCC GAGAGCTTGC ACATGTTCAC CTTCCTCTTT GATGATATTG GTATTCCCCA AGATTACAGG
CACATGGAGG GCTCTGGAGT TAACACCTAC ACCTTGATCA ACAAGGCCGG AAAAGTGCAT TATGTGAAGT TTCACTGGAA ACCAACTTGC GGGGTCAAGA ACTTGCTGGA GGAAGAGGCA
ATTAGAGTTG GGGGATCCAA TCACAGCCAT GCGACTCAGG ATCTTTATGA TTCCATTGCT GCTGGAAACT ATCCTGAATG GAAACTTTTC ATTCAGATCA TCGATCCTGA TCATGAAGAC
AAATTTGACT TTGACCCACT TGATGTGACT AAGACCTGGC CCGAAGATAT ATTGCCCCTA ATGCCAGTTG GCCGCTTGGT CTTGAATAGG AACATTGATA ACTTCTTTGC TGAGAATGAA
CAGCTTGCAT TTTGCCCTTC AATTGTGGTT CCTGGGGTCT TCTACTCAGA TGATAAGCTG CTCCAAACTC GTATCTTCTC GTATTCTGAT ACTCAGAGGC ACCGTCTTGG ACCAAATTAT
CTTCAACTCC CCCCCAATGC TCCTAAATGT GCTCATCACA ACAATCACCA TGAAGGTTTC ATGAATTTCA TGCATAGGGA TGAAGAGATA AACTATTTTC CATCAAGGTA CGATCCTGTT
CGTCATGCAG AGAGATATCC CATTCCAACT GCTATGCTGA CTGGAAAGCG TGAAAAGACC ATCATTGAGA AAGAGAACAA CTTCAAGCAG CCTGGAGAGA GATACCGATC ATGGACACCT
GACAGGCAGG CCGACAAATC TCTGGGTCAG AAATTAGCAT CTCGGCTCAA TGTGCGACCA AGCATTTAA
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Retrieve as FASTA
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