Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
202 (176) |
| PWM (Da): |
22779.56 (19593.0) |
Transmb domain: |
i7-26o |
| PI (pH): |
8.01 (7.18) |
Peptide Signal: |
cut: 27 range:27-202 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MQWFKSPSFF PFLFALLALS VYFFNAHRPA SRAPEMAEES SKSIYDFAVK DIRGNDVSLS EYSGKVLLIV NVASKCGLTQ SNYKELNTLY EKYKDQGFEV LAFPCNQFAG QEPGSNEEIQ
ETVCTMFKAE FPIFDKVEVN GKNAAPLYKF LKSQKGGIFG DGIKWNFTKF LVNREGKVVE RYAPTTSPLK IEKDIQNLLG SS*
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Retrieve as FASTA
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| Remarks |
Complete sequence from NGS (4 introns) and 1 EST. Partial DNA (last exon is mising). |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGCAGTGGT TCAAATCCCC CAGCTTCTTC CCATTCCTCT TCGCGCTTCT AGCTCTCTCC GTCTACTTCT TCAACGCGCA TCGACCGGCG TCTCGTGCTC CTGAAATGGC CGAGGAATCG
TCCAAGTCCA TCTACGATTT CGCCGTCAAG GTGCCTTTTT CTTTTTTCTT TTGAGATGTC GACTGGGATG ATTGGTGGTG CTTATCCTGT TCTGTCTGCT CTTGGGTTGG AGAGGGGnnn
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnGGGGGG GGTGGGGAGC GGAGATTTCA GCTGTCCCCA
TGGGCGTAGG GGCTGATTGG GTTTGAGATG GTGATTGCTT GCGCGTACTC GGTCAGAAAC TAACGGCGTC GTTGAAATTC CTAAGCAAGG CATGAAACGC TTGTTTGTAA TTCTAATGCT
TTTCTTCTGC AACTACGAAC TGGCGGGTCG ATGACCTGAA TGTGGGAGTT AGGTTGAGTA TCGATCGGAT CATGAATCTT TTGCTTTATC GTTCGGTCTT CTTTCAACTT GATACGGATC
CCTGTTTGTA CGTTCGTTTC TGCGGAAGAG GTGGATATGC CATATTGTGC TTCTTGCGTT GTAGAAATTT ATTTGATGTA Gnnnnnnnnn nnnnnnnTAG TTAGAGATAT TTATGACTGT
AGATGTCAAT TATCTGATGC ATATGCAGGA CATTCGTGGA AATGATGTAA GTTTGAGCGA GTACTCTGGG AAGGTTCTTC TGATTGTCAA CGTTGCTTCA AAATGGTATC GCCACTGAAT
GCGCCTTCTC TTCAAGAATT GTGTTTCTTT GATTAGAACC TCGTTGTATG TCGCTATGTG TTTGACTGCA TGCGGAACAC TTGCATGTCC AATCTTGAAC CTGTTATCAC TCTTTTGGTA
GTTTAAGCAG CATGAGCCTC CGTCGATCCC GTAAACCTGG GGCTGCTTCT CTTTCCCCTT TAACGGCTAT GCATAGATCT ATTAACCATT TGTTCTAGAT GTAATTGAGT GGCCAATTGT
TAAATCCAGT TCATGTTCCC AGTAACAGTC AACTCCTTGA ACTTATATCA TCTGCTTTGA TACTTATGAT ATCTAATATA GCGCACACAT GTTTGCAGTG GTCTCACCCA ATCAAATTAC
AAGGAATTGA ACACTTTATA TGAAAAATAC AAGGATCAAG GTTTGCTCTT TGGTCTTTTG TGTTTTGATT TCGTTCTCAT ATGTTTTACT CTGCGCTATA TCCTTGGGGT TTGTATAGGT
TCATGACTGA CATTTCTTTG CAGGATTTGA AGTACTGGCA TTTCCATGCA ACCAGTTTGC AGGACAAGAG CCAGGGAGTA ATGAAGAGAT TCAAGAGACT GTATGCACTA TGTTCAAGGC
TGAATTCCCT ATTTTTGACA AGGTAAACAT GAGAAGCCCA AAACAATGAG AAAAATATTA AATTGAAAGG GAATTCTTGA TATTCTGGCT CCTCATGCTT TTTGGTCATT TTAACTTGAG
AGGACTATCA ATCTCATAGT ACGCATAAAA ATTGATGATT GACCAGTTCC AGATGAGGTT GAGAATTTGC TTGCAATGTG TTTCATTTTC TCTTTCCACA GTGTGATAAA AGAGACTTGT
TCTATATGCA AGTTCAAGTT GCATAACCGT CCTCCTCTTT TGCAAATTTG ACTCTGTACA ATATGGAGAA AAGATGTTCT GAGTTGATAT TACACTCTAT TTTTGATATT GTAGTCTATT
GTGCTACAGG TTGAGGTGAA TGGCAAGAAT GCAGCCCCAC TCTACAAGTT TTTAAAATCT CAGAAAGGAG GGATATTTGG AGATGGCATC AAATGGAACT TTACAAAGTT TCTGGTGAAC
AGAGAAGGGA AAGTTGTGGA GAGATATGCT CCCACTACAT CACCTCTTAA AATTGAGGTT AGGGATCTGA TTTACAACAA TGCGAAAGAG CAATTTAAGT CGAATCTAAT TTATTTTTTC
GGTTATCCTG CAGAAAGATA TCCAAATCTG TGGGGATCGT CTTGA
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGCAGTGGT TCAAATCCCC CAGCTTCTTC CCATTCCTCT TCGCGCTTCT AGCTCTCTCC GTCTACTTCT TCAACGCGCA TCGACCGGCG TCTCGTGCTC CTGAAATGGC CGAGGAATCG
TCCAAGTCCA TCTACGATTT CGCCGTCAAG GACATTCGTG GAAATGATGT AAGTTTGAGC GAGTACTCTG GGAAGGTTCT TCTGATTGTC AACGTTGCTT CAAAATGTGG TCTCACCCAA
TCAAATTACA AGGAATTGAA CACTTTATAT GAAAAATACA AGGATCAAGG ATTTGAAGTA CTGGCATTTC CATGCAACCA GTTTGCAGGA CAAGAGCCAG GGAGTAATGA AGAGATTCAA
GAGACTGTAT GCACTATGTT CAAGGCTGAA TTCCCTATTT TTGACAAGGT TGAGGTGAAT GGCAAGAATG CAGCCCCACT CTACAAGTTT TTAAAATCTC AGAAAGGAGG GATATTTGGA
GATGGCATCA AATGGAACTT TACAAAGTTT CTGGTGAACA GAGAAGGGAA AGTTGTGGAG AGATATGCTC CCACTACATC ACCTCTTAAA ATTGAGAAAG ATATCCAAAA TCTGTTGGGA
TCGTCTTGA
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Retrieve as FASTA
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