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Entry information : CneoCcP
Entry ID 11134
Creation 2012-06-07 (Christophe Dunand)
Last sequence changes 2012-06-07 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2012-06-07 (Christophe Dunand)
Peroxidase information: CneoCcP
Name CneoCcP
Class Cytochrome C peroxidase     [Orthogroup: CcP004]*
Taxonomy Eukaryota Bacillariophyta Coscinodiscophyceae Chaetocerotaceae Chaetoceros
Organism Chaetoceros neogracile    [TaxId: 240364 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CneoCcP
start..stop		 S start..stop
PtrCcP02 286 6.79e-95 45..297 149..399
PtrCcP02 59 0.000000000522 1..42 36..74
MoAPx-CcP 275 3.42e-91 1..292 42..336
BprCcP01 237 7.51e-76 45..296 141..392
BprCcP01 59 0.000000000572 1..45 28..69
GtCcP01 217 8.23e-68 45..285 145..390
GtCcP01 44 0.0000497 1..45 32..73
Literature and cross-references CneoCcP
EST ref. GenBank:   EL622312.1 [3' end]  EL621266.1 [Fragment]
Protein sequence: CneoCcP
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   322
PWM (Da):   %s   35170.04  
PI (pH):   %s   5.12
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
RLAWHTSGTY DKDDTTSQAG GSNGATMRFS PEIDDGANAG LSxxRMGFDD KDIVALSGAH TVGSCHETRS GFDGPWTSNP TKFDNEYFRN LLQVDWTVRK WEGPKQFTDP TGKLMMLPTD  MALIEDEQFL QIVKNYAVNE KQFFDDFAVA FGKLISLGCP DHCQPGVTAK NLVEESKEDS DFRDMSMHGN LIRMKEIPGK PNPNSKEHFT DRTPLHKASY FGHSHVIEYL LECGANVNVD 
DVEGDTPLHD ACRLGHATSV KLLLKAGAIT DAVNKLGESP ADLAKYVGCE EISDMLSSDG GSNFVRKVKS IFTKKEKTEN SN 

Retrieve as FASTA  
Remarks Partial sequence from 2 ESTs. 5'end is missing.
cDNA►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ACCGACTTGA GGATGAGCGT ATCGCTAGCG CAACGGAATG CCAGGGCACG ATCATGACAG ATCGGAAGGC CCATTGCAAT CGCTTCCGCG CGTGCGATCA TATGCAGTGC AGGACAGTCG  ACTGAAAGCG CAGTGAGCGC CACGCATATG TGAGTAGCTC ACTCATAGCA CCAGCTTACA CTTTATGCTC GCTCGTATGT GTGTGGATGT GAGCGATACA TTTCACACAG AAACAGCTAT  GACATGATAC GCAAGCTCGA AATTAACCTC ACTAAAGGGA ACAAAAGCTG GAGCTCCACC GCGGTGGCGG CCGCTCTAGA CTAGTGGATC CCCCGGGCTG CAGGAATTCG GCACGAGGCA  TTGTTGCTTT GAGCGGTGCA CATACTGTAG GATCTTGTCA TGAGACGAGG TCAGGGTTTG ATGGACCTTG GACTAGCAAT CCCACGAAAT TTGATAATGA ATACTTTCGC AATCTGCTCC  AGGTCGATTG GACAGTTAGG AAATGGGAAG GACCCAAACA GTTCACCGAT CCTACTGGGA AGTTGATGAT GCTGCCAACA GACATGGCAC TCATTGAAGA TGAGCAATTC CTCCAAATCG  TCAAGAACTA TGCAGTCAAT GAAAAACAGT TTTTTGATGA TTTTGCTGTT GCTTTTGGAA AGCTGATTTC TCTCGGTTGT CCTGACCACT GTCAGCCTGG TGTCACAGCA AAAAATCTTG  TGGAGGAATC CAAGGAAGAC AGTGATTTCC GTGACATGTC TATGCACGGA AATTTGATTC GTATGAAGGA AATCCCTGGA AAGCCTAACC CCAACTCGAA GGAGCACTTC ACGGACAGAA  CACCTCTTCA CAAGGCAAGC TACTTTGGGC ATTCTCATGT CATTGAGTAT CTACTTGAAT GCGGGGCGAA TGTTAATGTG GACGATGTGG AAGGAGACAC TCCTTTGCAT GATGCTTGTA  GGCTTGGTCA CGCCACTTCT GTCAAGCTTC TTTTGAAAGC CGGAGCTATC ACGGATGCTG TGAATAAACT GGGCGAGTCT CCCGCGGACC TTGCAAAGTA TGTTGGTTGT GAAGAGATCT  CTGACATGCT TTCCAGTGAT GGTGGATCCA ACTTTGTCCG CAAAGTAAAG TCAATTTTTA CCAAGAAGGA GAAGACTGAG AATTCAAACT AAATATGTTT AATGCAGTTT CTCAGGAAAA 
AAAAAAAAAA AAAAAAAA 

Retrieve as FASTA