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Entry information : EguAPx09
Entry ID 11165
Creation 2012-06-14 (Qiang Li)
Last sequence changes 2016-04-07 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2016-04-07 (Christophe Dunand)
Peroxidase information: EguAPx09
Name EguAPx09
Class Ascorbate peroxidase    [Orthogroup: APx2003]
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus gunnii    [TaxId: 3933 ]
Cellular localisation N/D
Tissue type Mesophyll cells
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EguAPx09
start..stop		 S start..stop
EglAPx09 589 0 1..287 1..287
EgrAPx09 588 0 1..287 1..287
LsaAPx02 500 0 1..287 1..285
RcAPx02 499 0 1..287 1..288
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 10158..10270 111 N° 2 9921..10045 123 N° 3 8907..8956 48 N° 4 8383..8448 64
N° 5 8258..8306 47 N° 6 7287..7369 81 N° 7 7121..7200 78 N° 8 6929..7031 101
N° 9 6155..6349 193  
complement(join(6155..6349,6929..7031,7121..7200,7287..7369,8258..8306,8383..844 8,8907..8956,9921..10045,10158..10270))


exon

Literature and cross-references EguAPx09
Literature Keller,G., Marchal,T., SanClemente,H., Ladouce,N., Wincker,P., Couloux,A., Teulieres,C. and Marque,C. Development and functional annotation of an 11,303-EST collection from Eucalyptus for studies of cold tolerance Tree Genet. Genomes 5, 317-327 (2009).
EST ref. GenBank:   CU403942.1 [5' end]
Protein sequence: EguAPx09
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   287
PWM (Da):   %s   31363.11 Transmb domain:   %s   o258-280i
PI (pH):   %s   6.88
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MALPVVDTEYLKEIDKARRHLRALIAYKNCAPIMLRLAWHDAGTYDAKTKTGGPTGSIRNEEEYSHGANAGLKIALDFEDVKSKCPRITYADLYLAGVVAVEVTGGPTIDFVPGRKDSRV
SPNEGRLPDANQGPPHLRDIFYRMGLSDKDIVSLSGAHTGRAHPERSGFDGPWTQEPLKFDNSYFVELLKGESEGLLKLPTDKALLEDPAFRPYVELYADEDAFFRDYVISHKKLSELGF
TPSSSGSKTVANGAVLAQGAVGVAVAAAVVILSYFYEVRKKMK*

Retrieve as FASTA  
Remarks Complete sequence from genomic. Scaffold_9_32440 (10270..6155)
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGCTGCCGGTGGTCGACACGGAGTACCTGAAGGAGATCGACAAGGCCCGCCGCCACCTCCGCGCGCTCATCGCCTACAAGAACTGCGCTCCGATCATGCTCCGGCTGGCGTAAATT
TCGCTTCGCCCCCGCCTCGATCGGCGACGACGGTTTTCTTTCTTCGATTCGATTAGCTCGCCGGTTTCTGACGTCCGGAGGTTTTCGCCGATTCGGTCTTTGCAGGTGTGGCACGACGCC
GGGACCTACGACGCGAAGACGAAGACCGGCGGCCCCACCGGCTCGATCCGGAACGAGGAGGAGTACTCCCACGGCGCCAATGCCGGCTTGAAGATCGCTCTTGATTTTTGCGGTGAGCTC
TCCGCTCTTTCCGAGCTACCTGTCTTCGGTTCTCCGCCTTNGCTGTTTTCGTTCCTTCGGCGGAGCCGTGTCTTCGCCTGTCCAGCGTCCCGTGCCGAAGTAGTTGCTTGAGTTCANCTA
TTCATGCGTTGACAGCAGTTCGGAGGGTGTGCATGCAATTGTAGGTTGCGATTGTGCGATTCCCGTTGCGTGCTTATATGATGCTAAATAGATATAGGTGCTTCGAGATTAGAAAGTCCA
ATTTCCATGGACGTCTGTCTTCTAATACAAGNAGTCTGCTTCAATTATAGCTTTCCTTCACTTGCTGCTGTTGGAGGCCTTCGCGTTTGCTTATGTTTTGTGTTATTTGATGAGTAATGT
TTGACTTGATCAATTATCTTACGATGTTTAGTGCTCGGGGTGCCGGTTGTCTGTTATACTGAAGACAGTTAACGAGTTTGTCAACGTGATGCTATGTACTTACAAATTCTTGAAAGGCCA
AGCAGTGCGTTTGCATACTCTGATTTACTTTTGTTACTTGCTAGGTTCATTTAACCAAGTTTAGATATATTTGCAATATTCATCAGTATAGAATGAATGAAGATAATTATTACTNCAGAC
ATTGTTACTTCCTTTAAAGAAATCCCTACAGTTCTCATAAAGTTGAGGTATATGTAATATCCTATGTTCAGTTTATGAGAGCATGCTTAACATGGGTGGTTTAGTGTTCTGTCTAGTGCT
TCCATGATTGTTGACCAAGGAAATCCTAAGACTGTTGCATATATTTTACACAAGTCAACTTGTAGATATACACAAGTCAACTTGTAGATATGTTATGTTTCTAATAGTTTCAACTNTACA
AGTGTAGGAACCCATCANGGATAAGGTCATAGCTTTGATGAATAGACTTTTTTGCAAATGGAGTTGAGATATAACTTCAATCAGTATATTTACATTTGCTTTTATGTTGGATACAGAGAG
GATGTGAAGTCCAAATGTCCGAGGATTACATATGCAGATCTATACCAGGTGAAATGACTGTTTAAAGGATTCGTTCTTCTGTCTTANATATCACGAGTTGGCTCCCCCAATAGGTGGACA
AAATCATTGCTGATATAACAAGCTTAGTTTATAAAAGACTTTGAATTCTTGCCATTTAACTTTGATGTTTTCTGCCCTCCAGCATGCGACATCTTCAAAACTAATATGCATGCGCGTGGT
GAAGCCCTTAATTGGCATAACCCAGAAATTCTTTATTTTGAGATACTTTAGGAACAAATCTTTATTTATCTTATTTTTAGTCCTCTGGGAATTTGGTTCTCAGTTGTTTATAGGAAATCT
CCTCTGTCTAGTTCAACTGGTAACATCCTTGGTTGTTTAGTGGTTGAATAATGTTATATTATAGCTGATCAATTCTAGTGGTTACTATAAATAATGGCTTATCAATTTGCGAGTATTGAT
CATTATGAGCGAATTGCCTGTTTCAGCTCTAGCAGGAGTTGTTGCAGTAGAAGTCACTGGAGGTCCCACAATTGACTTTGTTCCTGGAAGAAAGGTACTCTGTTTTATCTGTATGTGAGC
AAGATAATTCTTACGAGTGCCTTATTCATTAAGTTTTTTTCTATCTGCAGGAGATTCAAGAGTTTCTCCAAATGAAGGAAGACTTCCAGATGCTAATCAAGGTATTCTGTTGTGTCAACT
TTCCCTTTGTTGTTTGGCCTCCCTTCATTTCCCTCCATCCCTCCCTCCAAATATTATGGTCCACTCTGCTTCTTATTGCTCCAGGCAAAAAGTTAAATAACTATTTATTGTTTTCCTTAT
GGTTGCTGCCTGTTAATGTTGAAATGTATGTCCATCTCATCTGAATGTCAATTAGTAAATTTACAGAGGAATGATTTGAATGAGATAAGAAGTGCATTGAAACAAGGGTATCNGAGCTAA
NTGACAGTCAGATGTTGTCCATCCCATCTAAATGTCAGTAAGTTTCCCGATTAAGAACCTCACATGCAAAATGGGCACAGTGCCTATTTTGTATGAGTCAGCTGTTGTGAACTCACCACA
AAGAATGAGTTGAGAGAGAAGTGCTGGGATTTGAACTCTTGATCTGTCATCTGAAACAGTGCTAGAATATCCAACCTAAAAGTTTAAGCATTGATGTGGAGAGAGGCAACATGTATGTAA
GAAAACTTTAGCCATCAGGTGAGAGAGACTATATGTGTGTGAGACACATTATGACNATGTTTTCAAGGGATGTTTGATTATCCTAAAAGACNATATTACTACTCATGCGAACCCAGTTTG
ATATTTCACATGATATTTTACATCTGCAACTCACTCTAGCTGAGTGAAAGGAGGCTCAAATGAAAGGAGGCCTTCAACNGCAGCTTGGTTAAGCTTTATCAATTTGTGATATTCACGTTT
AACAGTCCACTGCCTACCTATAACTTATCATAGCTCTAAATCCATCGGAGATTTTTCATGCGTTATAATTCTTTTATTGGGGAAATACATGTACATTTTGCTTGAAGGGTATTCGAAATT
TTTTCTAAACTTGTCATTGCTGGATGTAGGTGTCCTCCACATCTAAGGGACATCTTTTACAGGATGGGCCTGTCAGACAAGGACATAGTGTCCTTATCAGGGGCTCATACACTGGTAATT
TCTATTTCTGCTTGGATTTACATTCAAGGTCAGCTGGCCATGTGCAACCACACTTGTTATATTTTCATTCTTGTTTCTAGGGGGAAGGGCACACCCGGAAAGATCTGGATTTGATGGTCC
TTGGACTCAGGAACCCCTTAAGTTTGATAATTCCTATTTTGTGTAAGATTTCGCCTGTTCGCTGGATGCATTTTCTACATTTCAGCTGGAGCATTATAGAGCCAGATACTAATTGATCAT
TTTTGATACAGCGCGAGTTGTTGAAAGGGGAATCAGAGGGGCTGCTGAAACTGCCAACTGACAAGGCATTGCTGGAAGATCCTGCATTTCGCCCTTATGTTGAGTTGTATGCGAAGGTAA
ATAGGCTTTTCGCGTGTTCTGGTGACTCCATTGATAAATCTATAAAATTGAATTGCAGTTACATGGTTTCCTTTTGTAAATTTGTTTTTGATGAAACTACCCCACCTGCACCACTATCTC
ATTTCCTTATGCACATGGTCTACAACCCTCTGATGCTGCTGTCCTTGGTTTTGCCAAGATTGAAATAAGATGGAAAGTGTTTTTCATGGAATTTATGCTGTATAGGCTTGTGATGCTAAA
AAATAAGCATTCAGTCTGTTCCATCACCATCTTCTATGTAGAGACCAGGAATCTTCATAATGAGATCGCGCATCAAATGTTGGGTAGATATATACATGTGTTGGGATGGATATATTATGT
GGATCCCTGAAACCTCTAGGCTAGAGCATCATCTTTGTGCTACTGGGAACACCTGATTTGATATTTGAATTGGTTGTTGTTCCCGCAACTCTCTCACGGTGGTTGGCATGACCTTGAAGA
GAGACAAACGGACAATTTGNTACTCTGCTTCTTTTTCCCCTCGTTTTCTTTTGTCATATGCTCTTCTTTCCCTAATGTTGTCAAGCATGTGGCAGGAGATGAGGATGCATTTTTCAGAGA
TTATGTAATCTCGCATAAGAAGCTCTCTGAACTGGGNTTCACGCCAAGTTCTTCAGGCAGCAAGACAGTAGCGAATGGTGCTGTATTGGCACAAGGTGCTGTCGGAGTGGCAGTGGCTGC
AGCCGTGGTGATCTTGAGCTACTTCTATGAAGTGCGCAAGAAAATGAAGTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGCTGCCGGTGGTCGACACGGAGTACCTGAAGGAGATCGACAAGGCCCGCCGCCACCTCCGCGCGCTCATCGCCTACAAGAACTGCGCTCCGATCATGCTCCGGCTGGCGTGGCAC
GACGCCGGGACCTACGACGCGAAGACGAAGACCGGCGGCCCCACCGGCTCGATCCGGAACGAGGAGGAGTACTCCCACGGCGCCAATGCCGGCTTGAAGATCGCTCTTGATTTTTGCGAG
GATGTGAAGTCCAAATGTCCGAGGATTACATATGCAGATCTATACCAGCTAGCAGGAGTTGTTGCAGTAGAAGTCACTGGAGGTCCCACAATTGACTTTGTTCCTGGAAGAAAGGATTCA
AGAGTTTCTCCAAATGAAGGAAGACTTCCAGATGCTAATCAAGGTCCTCCACATCTAAGGGACATCTTTTACAGGATGGGCCTGTCAGACAAGGACATAGTGTCCTTATCAGGGGCTCAT
ACACTGGGAAGGGCACACCCGGAAAGATCTGGATTTGATGGTCCTTGGACTCAGGAACCCCTTAAGTTTGATAATTCCTATTTTGTCGAGTTGTTGAAAGGGGAATCAGAGGGGCTGCTG
AAACTGCCAACTGACAAGGCATTGCTGGAAGATCCTGCATTTCGCCCTTATGTTGAGTTGTATGCGAAGGATGAGGATGCATTTTTCAGAGATTATGTAATCTCGCATAAGAAGCTCTCT
GAACTGGGNTTCACGCCAAGTTCTTCAGGCAGCAAGACAGTAGCGAATGGTGCTGTATTGGCACAAGGTGCTGTCGGAGTGGCAGTGGCTGCAGCCGTGGTGATCTTGAGCTACTTCTAT
GAAGTGCGCAAGAAAATGAAGTGA

Retrieve as FASTA