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Entry information : EguAPx01
Entry ID 11380
Creation 2012-12-05 (Qiang Li)
Last sequence changes 2012-12-20 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-12-20 (Christophe Dunand)
Peroxidase information: EguAPx01
Name EguAPx01
Class Ascorbate peroxidase    [Orthogroup: APx2001]
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus gunnii    [TaxId: 3933 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EguAPx01
start..stop		 S start..stop
EglAPx01 498 0 1..245 1..245
EgrAPx01 494 2.06e-180 1..245 1..245
EcamAPx01 493 2.85e-180 1..245 1..245
QshAPx01 465 4.62e-169 1..245 1..245
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 5604..5722 117 N° 2 5161..5335 173 N° 3 5002..5067 64 N° 4 3696..3744 47
N° 5 3537..3619 81 N° 6 3321..3400 78 N° 7 3032..3134 101 N° 8 2849..2908 58
complement(join(2849..2908,3032..3134,3321..3400,3537..3619,3696..3744,5002..506 7,5161..5335,5604..5722))


exon

Literature and cross-references EguAPx01
Protein sequence: EguAPx01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   249 (312)
PWM (Da):   %s   26870.79 (33649.4)  
PI (pH):   %s   6.51 (9.85) Peptide Signal:   %s   cut: 27 range:27-338
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAKRYPTVSEEYRKAAAKCKRKLRGLIAEKHCAPIVLRLAWHSAGTFDVQTKTGGPFGTIRHSAELAHEANNGLDIAIRLLEPIKEQFPILSYADFYQLAGVVAVEITGGPEIPFHPGRP
DKNEPPPEGRLPEATKGSDHLRQVFGHMGLSDKDIVALSGGHTxGRCHKERSGFEGPWTTNPLIFDNSYFKELLSGDKEGLIKLPSDKALIEDPxFRPLVEKYAADEDAFFADYEEAHLK
LSELGxxxx

Retrieve as FASTA  
Remarks Complete sequence from genomic.
scaffold_1_1199 (5722..2849)
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TACCCGACCGTGAGCGAGGAGTACCGGAAAGCCGCCGCGAAGTGCAAGAGGAAGCTCCGTGGGCTCATCGCCGAGAAGCACTGCGCTCCCATCGTCCTTCGACTGGCGTAAGTAATCTCG
CGATCTCCGCTAGTTGCTTGCTTCGGCACCTGTTGATGATCCGGTCTAGAAGTTTCGAGTTCGTAGACGAATGCTTGAACTCACAGATGGNCCGATTTCGACCGTTTGACGATCGAACCA
TGTGCATTTTGTCCGGCTTAAGCATCGCTCCGTGGATAGAGAGTTTTGTTTCCGCATGTCGTGGATGCAGCTGGCGACTGTAGATTTGTCGGCGATTGTTTGATTTTTCTGGTTCGGTGT
TCGTTGGCGTCGCAGATGGCACTCCGCCGCGGTACCTTCGACGTGCAGACGAAGACGGGAGGTCCCTTTGGGACGATCAGGCACTCTGCGGAGCTCGCTCACGAAGCGAACAACGGATTG
GATATCGCCATCCGGCTTCTGGAGCCGATCAAGGAACAGTTCCCGATCCTGTCCTACGCGGACTTCTACCAGGTATGACTGCCGAATGCAATTACAACCAAAATTGAATTTAAGTAATCA
AACTACGAAGCACGACGCTGAAATCTTGATATGTTGTATTGGAAGTTGGCTGGGGTTGTGTTGCTGTTGAAATAACTGGAGGGCCCGAGATTCCTTTCCACCCTGGTAGACCGGTAAGTT
GATTTTCATCTTTCTTCCAAAACTTGTTTTCTCTATTTGGCCGCTAAAGTAAGGATGAGCTAACTATTCATGCTCAATTTAGAAGCTTTCTTAAGTGGTTTGATGAGGTGTTTAGCTGCA
TGACCNTGCTGTTGTTCTTTTCTCAAANTAGAATTAAGAGATATGTGCNTGCTGGGATTCTGTTGCTGTTCAGCCTGAATAAACTATTCTAGCTCTTCCCATAGAAACTTTGTAATCTTT
GAATGAATGGCAGCTAGTGTCGGTAGGATTTTGTGAGAATCTAAATAGTAGGAAAGGGGGACACTAAGAACTTCATTGACAAACATAGAAGGAGATTCGCTTAGGTACGTAAGAGAGTTG
ATAGTATCCCAGGAAGCAAACAGATACGAGTTAAAAATCTTCTAGTACTGGAAGTTCGATAACTTGTGAATGGTAATCATCCTGAGAAACCAACTCCTGTGAAATGTTTATGAGCGAGCT
AGTTTTNNNNNNATAANNNNNTCNGGAAATNNNNNNNNNNNNNNNNNNCATCGACCTAATTATAATCGGAAATTCAGTGAATAGCTTCTAGAANTATAAGCATGATGTCCCTGTCTTCTT
GTCTATTGAACTAATGCTGANATTGAATATCGGAGTCCTCCGGAGTTATTAAAGACGATGTCAAAATGAAAATTGTGTGGGGATCTCCAGATAATTGGATAAAATTGTTTTGATATGTGC
GGTTTCACTCTCAGAATTGATGATGATTGATGTGTTTCTCGGTTGATGATTGATGTGTATCGTGCCTCCTATTTAGCCTATGAATGTCCCTTCTGGTATGCTCACTCCGTTCTCTCTTCT
TGACGAAAAGTGGGGTTGGAGATTTCTTGGTTGCTATAGACAAACAGAATAAGAAATGATTCCTCTCGTTGAAACTCTGGCAACTATACTTAGTTTGTCTGACAACCCGACTTGAGTGAT
GCAGGTTATGCTTAGTATGTTACTTTGAAATTTCAAATCCTTTAGCTTAATATCGGCCTTCTCATTATACTTTCTTACAACGCAATGGTCAATCCTGTTTGAAATATTGNTTGTTNAGAT
AATATACTGTTTTCTTGGTGTATTAGTTAGTAGGCTATNTNATACTNGGCATCATAATTCATAGAAACTTGAATCGCTTATTCCCACGGTTCAGATAAAAGCAAAAGTTCTCTAACATAT
ATTAGATATGAAGGTATCAATAAATCTCTGATAAANTACATTTTGCTCAGGACAAAAATGAACCCCTCCCCCTGAAGGCCGGTTGCCTGAAGCTACAAAAGGTTAGTTTGCTTGCAGTAA
AGTGCGAGAAGATTATTACTGGTGTCTATGCTTTGACAAGTAAACCACTCATTTCAGGTTCCGACCATCTATAAGACAAGTCTTTGGCCACATGGGTCTTAGCGACAAAGATATCGTTGC
CCTATCNGGTGGGCACACTNTGGTAAGTCGATTAGTCACACAGAGTTAAGTTTCACTCAGAATTACATATTTGCTAAGAATTAAGTCCATGTTGCTGTACAGTTTTNGAGACCTCNTGAA
TTCTCTATATTAATGCTCCCTTGCGCTCCTTTCTACAGGGCAGATGCCACAAAAGGAACGCTCTGGATTTGAAGGACCCTGGACTACCAACCCTCTCATTTTTGACAACTCCTACTTTAA
GTAAGAATGATCTTGCTCTATTCTTCTATAGTCAACTCAGCAGTTATATATCACNTGCTTAAACTTTGTAANCAGCTTCTTGACTTGCTTAATTAGCGCAGAGAAAAAAANATGGTTTTG
ACTTGCTTATGCTGTTGGTCCCTAATGCTGACAATTTTGATATCTGTGGATGTTCCTATGAAACAGGGAACTCCTCAGCGCGGAGACAAGGAAGGTCTGATCAAGCTACCATCTGACAAG
GCTCTTATTGAGGATCCCNTCTTTCGTCCTCTTGTTGAGAAGTACGCTGCGGTATGTTCGCAACCCAATGTCCTATCGTCATTTCAGAGAATTTTGCGGGGCCATCGATGGTGGAAACAA
TTTNTTTTTTTTTTGGGTGATCGTCTAATCGGGAGGCNGCTTTGGATGTTTCAGGACGAGGATGCATTTTCTTCGCGGATTATGAAGAAGCTCATCTGAAGCTGTCAGAGCTAGGGNNNN
NNNNNNNN

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TACCCGACCGTGAGCGAGGAGTACCGGAAAGCCGCCGCGAAGTGCAAGAGGAAGCTCCGTGGGCTCATCGCCGAGAAGCACTGCGCTCCCATCGTCCTTCGACTGGCGTAAGTAATCTCC
GGTACCTTCGACGTGCAGACGAAGACGGGAGGTCCCTTTGGGACGATCAGGCACTCTGCGGAGCTCGCTCACGAAGCGAACAACGGATTGGATATCGCCATCCGGCTTCTGGAGCCGATC
AAGGAACAGTTCCCGATCCTGTCCTACGCGGACTTCTACCAGGTATGACTGCCGGTTGCTGTTGAAATAACTGGAGGGCCCGAGATTCCTTTCCACCCTGGTAGACCGGTAAGTTGATTT
CCTCCCCCTGAAGGCCGGTTGCCTGAAGCTACAAAAGGTTAGTTTGCTTTAAGACAAGTCTTTGGCCACATGGGTCTTAGCGACAAAGATATCGTTGCCCTATCNGGTGGGCACACTNTG
GTAAGTCGATTAAAGGAACGCTCTGGATTTGAAGGACCCTGGACTACCAACCCTCTCATTTTTGACAACTCCTACTTTAAGTAAGAATGATCCGGAGACAAGGAAGGTCTGATCAAGCTA
CCATCTGACAAGGCTCTTATTGAGGATCCCNTCTTTCGTCCTCTTGTTGAGAAGTACGCTGCGGTATGTTCGCAATTCTTCGCGGATTATGAAGAAGCTCATCTGAAGCTGTCAGAGCTA
GGGNNNNNNNNNNNN

Retrieve as FASTA