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Entry information : EgrAPx01 (Eucgr.A01180 / Egrandis_v1_0.024254m)
Entry ID 8110
Creation 2011-02-04 (Christophe Dunand)
Last sequence changes 2011-12-08 (Qiang Li)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2013-10-30 (Qiang Li)
Peroxidase information: EgrAPx01 (Eucgr.A01180 / Egrandis_v1_0.024254m)
Name (synonym) EgrAPx01 (Eucgr.A01180 / Egrandis_v1_0.024254m)
Class Ascorbate peroxidase    [Orthogroup: APx2001]
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus grandis    [TaxId: 71139 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EgrAPx01
start..stop		 S start..stop
EglAPx01 506 0 1..249 1..249
EcamAPx01 503 0 1..245 1..245
EguAPx01 494 2.03e-180 1..245 1..245
QshAPx01 469 1.02e-170 1..248 1..248
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '8110' 'complement(join(18308253..18308268,18308445..18308503,18308627..18308729,18308916..18308995,18309132..18309214,18309291..18309339,18310597..18310662,18310756..18310930,18311199..18311317))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 18311199..18311317 117 N° 2 18310756..18310930 173 N° 3 18310597..18310662 64 N° 4 18309291..18309339 47
N° 5 18309132..18309214 81 N° 6 18308916..18308995 78 N° 7 18308627..18308729 101 N° 8 18308445..18308503 57
N° 9 18308253..18308268 14  
complement(join(18308253..18308268,18308445..18308503,18308627..18308729,1830891 6..18308995,18309132..18309214,18309291..18309339,18310597..18310662,18310756..1 8310930,18311199..18311317))


exon

Literature and cross-references EgrAPx01 (Eucgr.A01180 / Egrandis_v1_0.024254m)
DNA ref. Phytozome 12:   scaffold_1 (18311317..18308253)
Protein sequence: EgrAPx01 (Eucgr.A01180 / Egrandis_v1_0.024254m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   249 (299)
PWM (Da):   %s   27371.06 (32007.1)  
PI (pH):   %s   6.68 (7.29) Peptide Signal:   %s   cut: 24 range:24-322
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAKRYPNVSEEYRKAAAKCKRKLRGLIAEKHCAPIVLRLAWHSAGTFDVQTKTGGPFGTIRHSAELAHEANNGLDIAVRLLEPIKAQFPILSYADFYLAGVVAVEITGGPEIPFHPGRPDKNEPPPEGRLPEATKGSDHLRQVFGHMGLSDKDIVALSG
GHTGRCHKERSGFEGPWTTNPLIFDNSYFKELLSGDKEGLIKLPSDKALIEDPIFRPLVEKYADEDAFFADYEEAHLKLSELGFADA

Retrieve as FASTA  
Remarks Complete sequence from genomic. Correct prediction from phytozome.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCAAGCGTTACCCGAACGTCAGCGAGGAGTACCGGAAAGCCGCCGCGAAGTGCAAGAGGAAGCTCCGGGGACTCATCGCCGAGAAGCATTGCGCTCCCATCGTCCTTCGACTGGCG
TAAGTAATCTCGCGATCTCCGCTAGTTGCTTGCTTCGGTACCTGTTGATGATCCGGTCCAGAAGTTTCGAGTTCGTAGATGAATGCTTGAACTCACAGATGGACCGATTTCGACCGTTTG
ACGATCGAACCATGTGCATTTTGTCCGGCTTAAGCATCGCTCCGTGGATAGAGAGTTTTGTTTCCGCATGTCGTGGATGCAGCTGGCGACTGTAGATTTGTCGGCGATTGTTTGATTTTT
CTGGTTCGGTGTTCGTTGGCGTCGCAGATATGGCACTCCGCCGGTACCTTCGACGTGCAGACGAAGACGGGAGGTCCCTTTGGGACGATCAGGCACTCTGCGGAGCTCGCTCACGAAGCG
AACAACGGATTGGATATCGCCGTCCGGCTTCTGGAGCCGATCAAGGCACAGTTCCCGATCCTGTCCTACGCGGACTTCTACCAGGTATGACTGCCGAATGCAATTACAACCAAAATTGAA
TTTAAGTAATCAAACTACGAAGCACGACGCTGAAATCTTGATATGTTGTATTGGAAGTTTTGGCTGGGGTTGTTGCTGTTGAAATAACTGGAGGGCCTGAGATTCCTTTCCACCCTGGTA
GACCGGTAAGTCAATTTTCATCTTTCTTCCAAAACTTGTTTTCTCTATTTGGCGGCTAAAGTAAGGATGAGCTAACTATTCATGCTCAATTTAGAAGCTTTCTTAAGTGGTTTGATGAGG
TGTTTAGCTGCATGACCATGCTGTTGTTCTTTTCTCAAATTAGAATTAAGAGATATGTGCTTGCTGGGATTCTGTTGCTGTTCAGCCTGAATAAACTATTCTAGCTTTTCCCGTAGAAAC
TTTGTATTCTTTGAAAGAAGGCCAGCTAGTGTTGGTAGGATTTTGTGAGAATCTAAATAGTGGGAAAAGAGGACACCAAGAACTTCATTGACAAACATAGAAGAAGATTCGCTTAGGTAC
GTAATAGAGCTAATAGAATTTCAGGAAGCAAACAGATACAAGTGAAAAATCTTCTAGTACTGGAAGTTCGATAACTTGTGAATGGTAATCATCCTGAGAAACCAACTCCTGTGAAATGTT
TATGAGCGAGCTAGCATTGCAGCAACAAGAGTCTCAGGAAATATGCAATGTTCCCCCTGGCATTGACCTAATTATAATCGGAAATTCAGTGAATAGCTTCTAGAAGTATAAGTATGATGT
CCCTGTCTTCTTGTCTATTGAACTAATGCTGAAATTGAATATTGAAGTCCTCCATAGTTATTAAAGATGATGTCAAAATGAAAATTGTGTGGGGATCTCCAGATAATTGGATAAAATTGT
TTTGATATGTGCGGTTTCACTCTCAGAATTGATGATGATTGATGTGTTTCTCGGTTGATGATTGATGTGTATCGTGCCTCCTATTTAGCCTATGAATGTCCCTTCTGGTAGGCTCACTCT
GTTCTCTCTTCTTGATGAAAAATGGGGTTGGAGGTTTCTTGGTTGTTATAGACAAACAGAATAAGAAATGATTCCTCTCGTTGAAACTCTGGCAACTATACTTAGTTTGTCTGACAACCC
GACTTGAGTGATGCAGGTTATGCTTAGTATGTTACTTTGAAATTTCAAATCCTTTAGCTTAATATCGGCCTTCTCATTATACTTTCTTACAACGCAATGGTAAATCCTGTTTGAAATATT
GCTTGTTTAGATAATATACTGTTTTCTTGGTGTATTAGTTAGTAGGCTATATGATACTCGGCATCATAATTCATAGAAACTTGAATCGCTTATTCCCACGGTTCAGATAAAAGCAAAAGT
TCTCTAACATATATTAGATATGAAGGTATCAATAAATCTCTGATAAATTACATTTTGCTCAGGAGACAAAAATGAACCTCCCCCTGAAGGCCGGTTGCCTGAAGCTACAAAAGGTTAGTT
TGCTTGCAGTAAAGTGCGAGAAGATTATTACTGGTGTCTATGCTTTGACAAGTAAACCACTCATTTCAGGTGTTCCGACCATCTAAGACAAGTCTTTGGCCACATGGGTCTTAGCGACAA
AGATATCGTTGCCCTATCTGGTGGGCACACTCTGGTAAGTCGATTAGTCACACAGAGTTAAGTTTCACTCAGAATTACATATTTGCTAAGAATTAAGTCCATGTTGCTGTACAGTTTTGG
AGACCTCGTGAATTCTCTATATTAATGCTCCCTTGCGCTCCTTTCTACAGGGGGCAGATGCCACAAGGAACGCTCTGGATTTGAAGGACCCTGGACTACCAACCCTCTCATTTTTGACAA
CTCCTACTTTAAGTAAGAATGATCTTGCTCTATTCTTCTATAGTCAACTCAGCAGTTATATATCACCTGCTTAAACTTTGTAACCAGCTTCTTGACTTGCTTAATTAGCGCAGAGAAAAA
AACATGGTTTTGACTTGCTCATGCTGTTGGTCCCTAATGCTGACAATTTTGATATCTGTGGATGTTCCTATGAAACAGGGGGAACTCCTCAGCGGAGACAAGGAAGGTCTGATCAAGCTA
CCATCTGACAAGGCTCTTATTGAGGATCCCATCTTTCGTCCTCTTGTTGAGAAGTACGCTGCGGTATGTTTGCAACTCAATGTCCTATCGTCATTTCAGAGAATTTTGCGGGGTCATTGA
TGGTGGAAACAATTTTTTTTCTTTTTGGGTGATCGTCTAATCGGGAGGCTGCTTTGGATGTTTCAGGAGACGAGGATGCATTCTTCGCGGATTATGAAGAAGCTCATCTGAAGCTGTCAG
AGCTAGGGTGAGTCAAGAGACCGCACTCTGTTCGATACAATTCCCCGCAATATTCTTTCGACTTCCTCATTTTCTATTCATCATCTGTTCTCTACTGGTCTCCCTTCGCTCCCCCCATAT
TTCTGTCTCGGCACATGGAGATGGAACTAACTCTTGTCCCCCTTTCCTTGCTACTTGAATTAGATATTTGCGGACGCTTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCAAGCGTTACCCGAACGTCAGCGAGGAGTACCGGAAAGCCGCCGCGAAGTGCAAGAGGAAGCTCCGGGGACTCATCGCCGAGAAGCATTGCGCTCCCATCGTCCTTCGACTGGCA
TGGCACTCCGCCGGTACCTTCGACGTGCAGACGAAGACGGGAGGTCCCTTTGGGACGATCAGGCACTCTGCGGAGCTCGCTCACGAAGCGAACAACGGATTGGATATCGCCGTCCGGCTT
CTGGAGCCGATCAAGGCACAGTTCCCGATCCTGTCCTACGCGGACTTCTACCAGTTGGCTGGGGTTGTTGCTGTTGAAATAACTGGAGGGCCTGAGATTCCTTTCCACCCTGGTAGACCG
GACAAAAATGAACCTCCCCCTGAAGGCCGGTTGCCTGAAGCTACAAAAGGTTCCGACCATCTAAGACAAGTCTTTGGCCACATGGGTCTTAGCGACAAAGATATCGTTGCCCTATCTGGT
GGGCACACTCTGGGCAGATGCCACAAGGAACGCTCTGGATTTGAAGGACCCTGGACTACCAACCCTCTCATTTTTGACAACTCCTACTTTAAGGAACTCCTCAGCGGAGACAAGGAAGGT
CTGATCAAGCTACCATCTGACAAGGCTCTTATTGAGGATCCCATCTTTCGTCCTCTTGTTGAGAAGTACGCTGCGGACGAGGATGCATTCTTCGCGGATTATGAAGAAGCTCATCTGAAG
CTGTCAGAGCTAGGATTTGCGGACGCTTAA

Retrieve as FASTA