View Redoxidase 117

Entry information : AtPrx24 (At2g39040 / PER24 / AtperoxP24 / ATP47)

Entry ID	117
Creation	2006-02-02 (Filippo Passardi)
Last sequence changes	2015-06-03 (Christophe Dunand)
Sequence status	complete
Reviewer	Achraf Jemmat
Last annotation changes	2015-11-04 (Achraf Jemmat)

Peroxidase information: AtPrx24 (At2g39040 / PER24 / AtperoxP24 / ATP47)

Name (synonym)

AtPrx24 (At2g39040 / PER24 / AtperoxP24 / ATP47)

Class

Class III peroxidase [Orthogroup: Prx011]

Taxonomy

Eukaryota Viridiplantae Streptophyta Brassicaceae Arabidopsis

Organism

Arabidopsis thaliana [TaxId: 3702 ]

Cellular localisation

N/D

Tissue type

Roots

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	AtPrx24 start..stop	S start..stop
AlyPrx24	630	0	4..350	3..346
CagraPrx53	627	0	4..350	3..348
CrubPrx91	626	0	4..350	3..348
TsPrx24	608	0	6..350	8..357

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '117' 'complement(join(16299463..16299881,16300303..16300468,16300628..16300822,16300901..16301173))'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	16300901..16301173	271	N° 2	16300628..16300822	193	N° 3	16300303..16300468	164	N° 4	16299463..16299881	417
complement(join(16299463..16299881,16300303..16300468,16300628..16300822,1630090 1..16301173))

Literature and cross-references AtPrx24 (At2g39040 / PER24 / AtperoxP24 / ATP47)

Protein ref.	UniProtKB: Q9ZV04
DNA ref.	Phytozome 12: Chr2 (16301173..16299463)
mRNA ref.	GenBank: NM_129461.2
Cluster/Prediction ref.	Phytozome Gene 12: 19642555 UniGene: At.37216
Omic ref.	ePlant: At2g39040 TAIR: At2g39040

Protein sequence: AtPrx24 (At2g39040 / PER24 / AtperoxP24 / ATP47)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	350 (323)
PWM (Da):	38098.78 (35040.0)
PI (pH):	8.79 (8.73)	Peptide Signal:	cut: 28 range:28-350

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MANKSLEIRFLFPLVLFLVVKLLCVDGKGFNNNGHKIRKGRWEGK
LKMNFYHNSCPGAEDIVRQIVWKKVEANRSLAPKLLRVHYHDCFVRGCDASLLLDSVAGKAVSEKEARPNLSLSGFEIIDEIKYILEKRCPNTVSCADILTLAARDAVSYEFERPLWNVFTGRVDGRVSLATEAARDLPSAGANFTTLQKLFAESDLDVVDLVALSGAHTIGIAHCGVFGRRLLNFTGKGDTDPSLNPSYASFLKSECSDKSLRLNPSAVVGMDPTGPLAFDSGYFVSLLKNKGLFTSDAALLTDPSAAHIASVFQNSGAFLAQFGRSMIKMSSIK
VLTLGDQGGEIRKNCRLVN

Retrieve as FASTA

Remarks

Complete sequence from genomic (chromo 2, 3 introns), 2 cDNA and 3 ESTs.

Promoter►
Send to BLAST
Send to cis Analysis

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

ATATTAATTT ATAAATTTTT TAGATTTGCT TCTTATTCCA TAGTAAAATC TCTATAAATT AATGATGTTG GGACCATAAA TTTCTATTAA TTTATAGAGG TATTAATTTA TCAATAAATT AATAATTATT AATTTATAGA GAGTTTAGAC TAATTTTGTA ATTTTAAAAA AATATTATGT TTAAATTAAT TTTGTTTTAT TTATAATCAT TATTTTTCTA GAAATAATTG CAAATAAGAC TAAATTATTG TGTCTATAAA ATAACAAAAA AGTGTTTTCG ATGTAGTAAA ATTATTAAAA TTGAACATTA CTAAGAATTA GTATAATAAA AATAAAAATA ATAGCAGATT CATATTTTAC TAATATTTCT AACATACTCC CTCTGTTCTT TTTTGTTTGA TTGTTTAGAA AAAACACACA TATTAAGAAA ACATATTAAA TGTTGATTAT AAATGTATTA TTTTTAGTTT TTTACAGTTT TTTATAACTT TAAACCAATA ATAATTAACT ATTTTTCTTG AAAATTACAA TTCGTCAATA CTAACCAATA AATATTACAT GGAAAACTTA AAAAATCAAT CTTTTAGAAA CAATTTTTTT TTCTAAACAA TCAAACAAAA AGGAATAGAG TGAATATAAC TTATATATAT ATATATATAT ATATATACAA CAAAAAGGAA TAGAGTGAGT ATAACTTATA TATATATATA TATATATATA TATATATATA TATACAACAA AAAGGAATAG AGTGAGTATA ACTTATATAT ATATATATAT ATATATATAT ATTTTAAGAA TTTTTTACAA CTATTAATTT ATGTTATTAA TAAGACCATA TATTTACATA GGGATTTTAA AATAATTATT TATCTTATTA ATTTATCGAT TTGTGTAATT TTTTACACTG GTCCCAACTC ATGACCAAAA ATTTTTATTA ATTTATAAAA GTTATTAATT TATCGAGTAT TAATTTATAG AGGTTATAAT GTAAATAGTA TAAATTCATT AATAACTTGT GAATTTCTGT GTCTTTGCTT CTTTGGAGAA AAAAAAATTA TATGCTAAAT CAACGCATAC TAGAGTTGGG AGTTGGGCCT TTAAAATAAT AAGTGGGCCT TTACCTTGTG GACTTAGGCC ATATGAGCCC GAGAAAATAG ATTAAAACGA TTGGTGCCTT TGGAAGCGAC GACTTCGTTT GACTTTTCAA CTTAACGTTT TCGTCTCAAA TATAGCCGTA GACAAAAGAC GATTGCGTCA ACTAAAAGGT TAAAAGAGAC AGAAAATTTT GAACAAACGT TTCAACTATA TGTGAACAAA ATTTTGATTT TTTTCCCAAA ATTCCCATTG CATATGGAAA AAGATTTTGA TTTGGACCAT GATTTTTTTT TTGTTGAATT AATGTTAAAT AGACCATGGA TATTGAATTT CTTTTGTGAG TGTATGTATG ATATGTAAAA GCTTCAAATT GTGAAATTTA CAATCCGTTT ACTCCTTTGA TACTATATAT AAAAACACCA AGTTATTGCA AGATGGAAGG ATTAAGAATT TAAGATAATG GCCGGCCACT GACAAAGAAG GTTAAACTTT CATTAGGACA ATGAAAGTTT AAAAGAATAA CAAAAAAAGA AATGCGTGAA TAAATGGAGA TAGCAGTGAA ATCTATAAAT ATCTGCATAA TGGATGTTCA CGTTATAGTT CAACTAATGA AGCTAAATTA TTATTTGCGG GAATTATAAA TACTTCTAAA TAATTATGTT GACTTGCAAC TTAATAATTA ATCCTTCATT TTCACAACAC ATACAGGGAA CTTTGCTTGG CCACCCAGAC ATATTATTAT TTCAATAATT ATTCAATTGC TAAAAAATAT TAGAAACTCA ACGGGCATAT ATGAAGTATG GAGCCTCAGT TTCTATATAA
AGCAACTCTG CCAAGTGCAT TCCTCATATA CAAAAGGAAG AAACACTTAA AAGAAAATAT CAAATCTAAA GTCGATCAC

Retrieve as FASTA

Terminator +►
Send to BLAST
Send to cis Analysis

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

TAAATTTTCA CTTTTTTTTT TATCTTAATA CCGTATAAAT TTGATTATCA TGTAATCATC ATTTGAGATA TGTTTTTCTT AATTTTATTA CAATACTAAG ATTTTAATGA TCCATATATA TATTTAAGTG GAATTGTATG TTTCCAATTT ATCTGTTTAA TTACCACTTC TATGTCTTTT TGACAAGGCC CGTACTTTAG CATGTGTAAG TAGAACGCTG TCCGGTTAAA AAAAAAACAG TGCAGTCTCT ATATAAATTG AGGTCAATAA TTTAAAAATT TTATTTATTC ACATTAAATA CACCTTGAAA ACTTCTTTTA AACATGGCTT ATAAATAGTT TGAAGAAATC TCCATTTTAT TCAAATCCGA AAACACAGAA GATACTTTTG TAACCATAAT CACAAATACA TCTTTATCTT AAACTTGAGA TGTTTTATTC AACAAATTAA AAACAAGTGA GAAACAAACT TTAAAGGACC GATCGCTCGA TGGGTCTCAT GCAAATCATC ATGCTGCTAG ATGTTTAGCT TGTCAATAGC TTGAAGTGCA TCGCCAGTGA GCCTACAAAG TCTCCATTCC TTAAAAACCT GCGCACCCAT CTGCTCATAG AAGTTGATAG CATTCACATT CCAATCGATC ACAATCCACT CCACTCTTCC GACACCCAAC TTCACTGCTT GCTTTGCCAC AGCGGTCAGT AGCAGTTTTC CGAAGCCTTT TCGTCTGTAA GGTTCTCTCA TGAAGATATC CTCGATGTAG AAACCCTGTT TCGCTAGAAA ACTTGGGTAG TTCGGGAAGA ACAGAACGAA TCCAGCCACC ACCACGTCGT TGAGCTTATC CGGCAAGAAC TTTTCTCTGT CCGGATCCTC GATAGGGAGA TCAACCTTAT GCGTCTCAAG AAAGGGGGTG AAATCAGGGG ACGAAGCGTC ATGAGTGGTG GGAAATGGGG AAGGGGAGAT
TTCCAAGAGG AAGACGGTGA CGGCTTGGAA CGGACGGGAG T

Retrieve as FASTA

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCTAATAAGAGTTTAGAGATTCGGTTTTTATTTCCACTTGTTTTGTTTTTGGTTGTGAAATTACTTTGTGTTGATGGTAAAGGATTCAATAATAATGGCCATAAGATAAGAAAAGGA
AGATGGGAAGGTAAGCTGAAGATGAACTTCTATCACAATAGCTGCCCTGGAGCCGAGGATATCGTGAGGCAGATAGTGTGGAAGAAAGTCGAAGCAAACCGTAGCCTGGCTCCCAAGTTA
CTGAGGGTTCATTACCATGACTGCTTTGTTAGGGTATGATGTGCATGTAGGGTTTTTTCTTTATGTGAACATCTTTCTTATAAAGATAAGTCTGATGTGGATGATTTTTAGGGGGGTGCG
ACGCATCGCTGCTTTTAGATTCGGTTGCTGGAAAAGCAGTGTCCGAGAAGGAAGCGAGACCTAATCTCTCGCTTTCCGGGTTTGAAATCATCGATGAGATCAAGTATATTCTCGAAAAAC
GATGCCCTAACACCGTCTCTTGCGCTGACATTCTCACTTTAGCCGCCCGAGATGCCGTCTCTTATGAAGTAATACATATGAACAAACTCGTCTAAAAAATTTCATGATTAGAAATCAAAA
ATTTAGTATTTTACTAGTCGCATATGTTAGTTTTAGATGTCTTTCTTATCAAATGAAACCAATAATCAATTCTAACTCCCTGAGTTTCTATGTTTGATGTGTTATAGTTTTTGAACGGCC
GCTATGGAATGTGTTTACCGGACGTGTTGATGGAAGAGTTTCATTGGCAACGGAGGCGGCCAGAGACTTACCATCCGCTGGGGCAAACTTCACCACTCTACAGAAACTCTTTGCCGAGAG
CGATTTGGACGTCGTTGACCTCGTCGCTTTATCAGGTTTACCATATTTGATATATCATTTTTTGGTAATCACATTTGCATATACGTTACTGATAAGAAACCAAGTGAATTAAAAGCTAAC
CAATGAAAATTGGGAACAAATAATAAAACTAAAGAACGCATAAAACTATAAGAAAATCGCGGGAATATCAGACCACGTGCATGTCCATGTTAGGAAGTGTATGGGATGCTACAAATTAAT
TTCCTCCAATCTTCAAGAAAAAGTATAATATCCGATCGTATATATACCATCAAATATTTGAGGATAATCTTGGAAAAGGCGTTGCACGTGATAATTATTCAAAAGTCAATTAATCTTCTT
AGGAATGATACACTAATATTTTCATATAAATCATTCATTTAATCACCTAATTTTTCGATTATATATTAAAAAGAAACGAAATTGTATGAAAAATAGGAGAGCACACACGATAGGAATAGC
ACATTGCGGTGTGTTTGGCAGAAGGCTCTTGAACTTCACCGGAAAAGGGGACACAGATCCTTCCCTAAACCCTAGTTACGCCTCCTTCCTCAAATCCGAATGCTCCGACAAATCTTTAAG
ACTCAACCCTTCCGCAGTGGTCGGAATGGACCCTACTGGTCCTCTCGCCTTTGACAGTGGCTACTTCGTCTCTCTACTCAAGAACAAAGGACTCTTCACCTCCGACGCCGCCTTGTTGAC
TGATCCCTCCGCCGCTCACATTGCTAGTGTTTTCCAAAACTCCGGCGCTTTTCTTGCTCAGTTTGGTCGGTCCATGATAAAGATGAGTTCCATCAAAGTCCTTACTCTTGGAGATCAAGG
TGGTGAGATTCGTAAAAATTGTCGCCTCGTCAACTGA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA

cDNA►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATATACAAAA GGAAGAAACA CTTAAAAGAA AATATCAAAT CTAAAGTCGA TCACATGGCT AATAAGAGTT TAGAGATTCG GTTTTTATTT CCACTTGTTT TGTTTTTGGT TGTGAAATTA CTTTGTGTTG ATGGTAAAGG ATTCAATAAT AATGGCCATA AGATAAGAAA AGGAAGATGG GAAGGTAAGC TGAAGATGAA CTTCTATCAC AATAGCTGCC CTGGAGCCGA GGATATCGTG AGGCAGATAG TGTGGAAGAA AGTCGAAGCA AACCGTAGCC TGGCTCCCAA GTTACTGAGG GTTCATTACC ATGACTGCTT TGTTAGGGGG TGCGACGCAT CGCTGCTTTT AGATTCGGTT GCTGGAAAAG CAGTGTCCGA GAAGGAAGCG AGACCTAATC TCTCGCTTTC CGGGTTTGAA ATCATCGATG AGATCAAGTA TATTCTCGAA AAACGATGCC CTAACACCGT CTCTTGCGCT GACATTCTCA CTTTAGCCGC CCGAGATGCC GTCTCTTATG AATTTGAACG GCCGCTATGG AATGTGTTTA CCGGACGTGT TGATGGAAGA GTTTCATTGG CAACGGAGGC GGCCAGAGAC TTACCATCCG CTGGGGCAAA CTTCACCACT CTACAGAAAC TCTTTGCCGA GAGCGATTTG GACGTCGTTG ACCTCGTCGC TTTATCAGGA GCACACACGA TAGGAATAGC ACATTGCGGT GTGTTTGGCA GAAGGCTCTT GAACTTCACC GGAAAAGGGG ACACAGATCC TTCCCTAAAC CCTAGTTACG CCTCCTTCCT CAAATCCGAA TGCTCCGACA AATCTTTAAG ACTCAACCCT TCCGCAGTGG TCGGAATGGA CCCTACTGGT CCTCTCGCCT TTGACAGTGG CTACTTCGTC TCTCTACTCA AGAACAAAGG ACTCTTCACC TCCGACGCCG CCTTGTTGAC TGATCCCTCC GCCGCTCACA TTGCTAGTGT TTTCCAAAAC TCCGGCGCTT TTCTTGCTCA GTTTGGTCGG TCCATGATAA AGATGAGTTC CATCAAAGTC CTTACTCTTG GAGATCAAGG TGGTGAGATT CGTAAAAATT GTCGCCTCGT CAACTGATAA ATTTTCACTT TTTTTTTTAT CTTAATACCG TATAAATTTG ATTATCATGT AATCATCATT TGAGATATGT TTTTCTTAAT TTTATTACAA
TACTAAGATT TTAATGATC

Retrieve as FASTA