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Entry information : GmarCIIBC01
Entry ID 11871
Creation 2013-05-23 (Nizar Fawal)
Last sequence changes 2016-02-01 (Christophe Dunand)
Sequence status complete
Reviewer Achraf Jemmat
Last annotation changes 2017-04-19 (Catherine Mathe (Scipio))
Peroxidase information: GmarCIIBC01
Name GmarCIIBC01
Class Other class II peroxidase type C    [Orthogroup: CIIBC001]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Cortinariaceae Galerina
Organism Galerina marginata    [TaxId: 109633 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GmarCIIBC01
start..stop		 S start..stop
GmarCIIBC02 631 0 1..358 1..353
GmarCIIBC04 583 0 1..358 1..356
GmarCIIBC06 537 0 1..358 1..355
GmarCIIBC12 526 0 1..357 1..354
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '11871' 'complement(join(45576..45644,45706..45783,45848..45942,46002..46168,46225..46265,46316..46330,46382..46598,46657..46722,46778..46790,46843..46893,47003..47137,47195..47321))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 47195..47321 125 N° 2 47003..47137 133 N° 3 46843..46893 49 N° 4 46778..46790 11
N° 5 46657..46722 64 N° 6 46382..46598 215 N° 7 46316..46330 13 N° 8 46225..46265 39
N° 9 46002..46168 165 N° 10 45848..45942 93 N° 11 45706..45783 76 N° 12 45576..45644 67
complement(join(45576..45644,45706..45783,45848..45942,46002..46168,46225..46265 ,46316..46330,46382..46598,46657..46722,46778..46790,46843..46893,47003..47137,4 7195..47321))


exon

Literature and cross-references GmarCIIBC01
DNA ref. JGI genome:   scaffold_29 (47321..45576)
Cluster/Prediction ref. JGI gene:   75730
Protein sequence: GmarCIIBC01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   357 (335)
PWM (Da):   %s   37369.86 (34903.6)  
PI (pH):   %s   5.1 (4.94) Peptide Signal:   %s   cut: 23 range:23-357
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAFARLNLFVSFALALSQVANAGLVKRVTCSTGHVTANAACCALFPIVDTLQAGLFDGAECGEEAHSALRIAFHDAIGFSLKGTAMLGGADGSILVFNKTETSFHANGGIDDIVDSQFPF
FQQTGLSAGDFIHLAAAVGTANCPGAPRLKFFLGRPPPKAAAPDLTVPEPTDSVTAILARFADAGFSPREVVALLSSHTIAAADVVDVTIPGTPFDSTPHHFDGNFFLEVLLKGRLFPGA
GPQTGEVLSPIAGEMRLQSDFAISQDSRTACFWQDMINDQTRIMTEFGAAMAKLQVLGQNTKNLIDCSDVVPVPVAMDGTVKIPASFTSKDIQVACAAQPFPKLATRTGPAPTVPPM*

Retrieve as FASTA  
Remarks Complete from genomic (11 introns).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTTTGCTCGTCTCAACTTATTCGTCTCCTTCGCGCTTGCACTCTCGCAGGTCGCCAATGCTGGCCTCGTAAAGCGCGTAACTTGCTCTACGGGCCACGTAACTGCGAATGCCGCC
TGCTGTGGTCTGTGCCCCCCATCTTGACCACCGTCGATTGTCGTTAACACTATCCTTTCAACAGCCCCCTTTTCCCTATTGTTGACACCTTGCAAGCGGGTCTGTTCGACGGTGCCGAAT
GCGGTGAAGAGGCCCATTCCGCTCTCCGAATTGCCTTCCATGACGCCATTGGATTCTCACTTAAAGGTACGGCCATGCTTGGTGCCCATAATGCTTGCTTTCTAACTGAATTTTTATTAT
CCCAGGCGGAAAGTTAGTCGCTTCTTCTAGTAGGTTATTGTGGACGTTTTACTGACATGACGCAGGGGAGGAGAGGTGCTGACGGCTCCATTTTGGTGTTCAACAAGACCGAGACTTCTT
TCCGTGCGTTCTGTTTTCCATATCATATTGTTGCGGTGCCTGATTCAACTTTCAGATATGCAAATGGAGGGTAATTTGCATTTCTCCGTTTTCTACCCAACGAAGGCCTAACTATCTCCC
CATAGAAAATTGATGATATTGTGGACAGCCAGTTCCCATTCTTCCAGCAGACGGGATTAAGTGCTGGTGATTTGTGAGTATTCAATATTCATGAACCGTGATATTGATTTTCAATTTTAT
GCTATCCACAGCACATCCACCTCGCCGCAGCTGTCGGCACAGCCAACTGTCCAGGCGCCCCGAGGCTCAAGTTCTTCCTCGGAAGGCCTCCACCGAAAGCTGCTGCTCCGGATCTTACGG
TCCCAGAGCCCACTGACAGCGTAACCGCCATTCTTGCTAGGTTCGCTGATGCTGGCTTCTCTCCTCGGGAGGTTGTTGCTCTGCTTTCATCCCATACTATCGCAGCTGCTGTACGTGAAC
TGAATTAATATTTGCTCCGCATGACTGACTTTTAGTTATAGGAGATGTTGTTGATGTCGTACGTCTCATATCTCAAGGACAACTTTCCTTATTCTAAGCTTCTCGTAGACACTATTCCCG
GAACTCCGTTTGATTCCACTCCACATCACTTGTGAGTGTTATTCATTTCCCTCGAGAACTCGCTGACGTTGTACTTTCAAAATTTAGTGTGATGGTAACTTTTTCCTCGAAGTCCTCCTG
AAGGGGCGTCTGTTCCCTGGTGCCGGCCCACAAACTGGAGAAGTTCTTTCTCCCATTGCTGGCGAGATGCGTCTCCAGAGCGACTTTGCCATCTCTCAGGATTCGAGGACTGCTTGCTTC
TGGCAGGACATGATCAGTAAGTACTTTTTGGTCGGACATCACAATGAATTGCTCACATGTTGTTCTTGCACATAGACACGACCAAACCCGAATTATGACCGAGTTTGGTGCTGCAATGGC
GAAGCTCCAGGTCTTAGGACAGAACACGAAGAACCTTATTGACTGCTCTGACGTGGGTTTTTTCCAATCTCGATAGCCAATTGGTTCTGATTCGCTTCCCTTTTCTATCTCTGTAGGTGT
CGTACCAGTACCTGTCGCTATGGATGGTACTGTCAAGATCCCAGCCAGCTTCACAAGCAAAGATATTCAAGTTGCTGTAAGTTCGACTCCAGTCTTACTTTCGATGGCAAATTCAATATC
TATCCTTTCTATACCAGTGTGTGCCGCTCAGCCATTCCCGAAACTTGCTACTCGCACTGGGCCTGCTCCCACCGTTCCTCCTATGTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTTTGCTCGTCTCAACTTATTCGTCTCCTTCGCGCTTGCACTCTCGCAGGTCGCCAATGCTGGCCTCGTAAAGCGCGTAACTTGCTCTACGGGCCACGTAACTGCGAATGCCGCC
TGCTGTGCCCTTTTCCCTATTGTTGACACCTTGCAAGCGGGTCTGTTCGACGGTGCCGAATGCGGTGAAGAGGCCCATTCCGCTCTCCGAATTGCCTTCCATGACGCCATTGGATTCTCA
CTTAAAGGTACGGCCATGCTTGGAGGTGCTGACGGCTCCATTTTGGTGTTCAACAAGACCGAGACTTCTTTCCATGCAAATGGAGGAATTGATGATATTGTGGACAGCCAGTTCCCATTC
TTCCAGCAGACGGGATTAAGTGCTGGTGATTTCATCCACCTCGCCGCAGCTGTCGGCACAGCCAACTGTCCAGGCGCCCCGAGGCTCAAGTTCTTCCTCGGAAGGCCTCCACCGAAAGCT
GCTGCTCCGGATCTTACGGTCCCAGAGCCCACTGACAGCGTAACCGCCATTCTTGCTAGGTTCGCTGATGCTGGCTTCTCTCCTCGGGAGGTTGTTGCTCTGCTTTCATCCCATACTATC
GCAGCTGCTGATGTTGTTGATGTCACTATTCCCGGAACTCCGTTTGATTCCACTCCACATCACTTTGATGGTAACTTTTTCCTCGAAGTCCTCCTGAAGGGGCGTCTGTTCCCTGGTGCC
GGCCCACAAACTGGAGAAGTTCTTTCTCCCATTGCTGGCGAGATGCGTCTCCAGAGCGACTTTGCCATCTCTCAGGATTCGAGGACTGCTTGCTTCTGGCAGGACATGATCAACGACCAA
ACCCGAATTATGACCGAGTTTGGTGCTGCAATGGCGAAGCTCCAGGTCTTAGGACAGAACACGAAGAACCTTATTGACTGCTCTGACGTCGTACCAGTACCTGTCGCTATGGATGGTACT
GTCAAGATCCCAGCCAGCTTCACAAGCAAAGATATTCAAGTTGCTTGTGCCGCTCAGCCATTCCCGAAACTTGCTACTCGCACTGGGCCTGCTCCCACCGTTCCTCCTATGTAA

Retrieve as FASTA