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Entry information : GmarAPx-CcP03
Entry ID 11911
Creation 2013-05-27 (Christophe Dunand)
Last sequence changes 2013-05-27 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2017-04-19 (Catherine Mathe (Scipio))
Peroxidase information: GmarAPx-CcP03
Name GmarAPx-CcP03
Class Hybrid Ascorbate-Cytochrome C peroxidase    [Orthogroup: APx-CcP002]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Cortinariaceae Galerina
Organism Galerina marginata    [TaxId: 109633 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GmarAPx-CcP03
start..stop		 S start..stop
GmarAPx-CcP05 723 0 1..586 1..580
GmarAPx-CcP07 701 0 18..581 18..575
HcyAPx-CcP03 570 0 17..598 19..595
GmarAPx-CcP02 531 0 1..467 9..477
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 604979..605197 217 N° 2 605251..605337 85 N° 3 605386..605452 65 N° 4 605508..605820 311
N° 5 605878..605991 112 N° 6 606057..606231 173 N° 7 606283..606678 394 N° 8 606735..607172 436
join(604979..605197,605251..605337,605386..605452,605508..605820,605878..605991, 606057..606231,606283..606678,606735..607172)


exon

Literature and cross-references GmarAPx-CcP03
DNA ref. JGI genome:   scaffold_23 (604979..607172)
Cluster/Prediction ref. JGI gene:   253196
Protein sequence: GmarAPx-CcP03
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   602 (584)
PWM (Da):   %s   64751.28 (62789.1)  
PI (pH):   %s   4.68 (4.73) Peptide Signal:   %s   cut: 19 range:19-602
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MVLVPFIVLSSVLTAALAYTWPSPQYDALEKFLYEGTDVNGNFIAFITTHCVHRTTPASGRHPSTVAAEWLRLAYHDAATHNVTDGSGGLDGSILYELTRPENTGAALTNSAADFQNSSS
KYISHADIIAMGAVWGIASCGGPSIPYRGGRIDATGPGRTGVPEPQQDLASHTESFRLQGFTPTEMIGLVACGHTLGGVRSFDFPSIILDPTGLNISTFDSTTKYDHAIISEYLNSSTNN
PLIRVANTSFASDLRIFGSDGNVTMKSLNSESAYFQTCTTLLARMLNTVPSDVTLTEEIELLPVKVWNAQITVVKSQLIFFTLLRLSHSTNVAPSVNRQVKLLWCDKRGQFKDCTKITNV
ASSQGGDFIPSTSPLTESQNITFSFYHFAFPISANRSVSKFWFQVDDGDGSAPVIHDNEGQGYVFQQDEIIYVPLLSHSNGPAGPNGFAQSFDFVVGIRSGNNVSRAQILGLDYTFQESG
AIFNSTVDLQHNITGFLVEGYDYYSGQVNTTGSVLTVDMEVVVGDVSFAVDYLPALGMVGVEELLSSDQRSLINNITTTSSSAAPSPTTRSPSSAVLSLLPPPSIYPALLGIFVSLVCSL
DH*

Retrieve as FASTA  
Remarks Complete sequence from genomic (7 introns).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGTTTTGGTTCCTTTCATCGTCCTGTCCTCTGTCCTGACTGCTGCATTGGCCTATACATGGCCTTCACCACAATACGATGCTCTCGAAAAGTTTCTTTATGAAGGAACTGATGTCAAT
GGCAACTTTATCGCCTTCATCACTACACATTGTGTGCATAGAACCACTCCTGCCTCGGGACGGCACCCATCAACAGTTGCTGCAGAATGGCTTCGCCTGTGGTATATTTTCTGTCCTGCT
TAAAACCATACCACAAATAACAACATGATATCAGGCGTACCATGACGCCGCGACACACAATGTCACGGATGGATCAGGGGGCTTAGATGGTTCAATACTGTACGAGCTCACCCGACCAGA
GAGGTGCGCCGACCTTGTCCACATGATTCACAACTAACAATCTCTGTCTAGAACACTGGTGCTGCATTAACTAATTCTGCGGCTGATTTCCAGAACTCATCAAGTAAATATATATCCCCC
GTGAGTCTGCCTTGGTCATTCGGCTGAGAACAGCCCACCTCATTTCCATGCTCAGACGCCGATATCATCGCAATGGGTGCGGTATGGGGTATCGCTTCTTGCGGTGGCCCTTCTATTCCC
TACCGAGGTGGCCGAATAGATGCAACAGGCCCGGGACGCACAGGCGTCCCAGAACCCCAGCAGGATCTAGCTTCTCATACGGAGAGTTTTCGACTGCAAGGATTCACCCCTACCGAAATG
ATTGGCCTCGTCGCGTGCGGGCATACCCTTGGCGGTGTAAGGAGTTTCGATTTTCCTTCCATCATTTTGGACCCAACTGGATTGAATATTTCGACATTCGACTCCACGACTAAATACGAT
CACGCCATATGTATGTCTGATCCATCCTCGTGTTTCGGTATTCTAACCTTGACGTTGATTAAATTAGAATCAGCGAATATCTAAACTCGTCGACAAATAATCCATTGATCCGGGTCGCGA
ATACCTCATTCGCATCCGACCTCCGCATATTTGGCAGCGATGGAAATGTAACGATGAAAAGAGGTAAAGTGATCATAGTCTTATGCGGGAGCACTCCATAACCTTAATTCTTGTCCTGTC
TGGCATAGTCTAAATTCGGAGAGTGCATACTTCCAAACGTGCACCACGTTGCTAGCGAGGATGCTAAATACTGTGCCTTCAGATGTAACACTGACGGAAGAAATTGAACTACTTCCGGTC
AAGGTCTGGAACGCCCAAATCACAGTGGTTAAGTCACAACTTATCTTTTTTACTCTGTTACGAGAGTAAGCCTTCGATACATTCCATATTTATTTTATTCATACTCTTTTTTCCAGCTCT
CGCACTCAACTAACGTTGCACCTTCCGTAAATCGACAAGTAAAACTACTCTGGTGTGATAAACGTGGCCAATTCAAGGATTGTACCAAGATAACCAATGTCGCTTCGTCTCAAGGAGGAG
ATTTTATCCCTTCAACATCTCCTTTGACCGAGTCCCAAAATATCACCTTCAGCTTCTACCATTTTGCTTTTCCCATCTCGGCCAACAGGTCGGTGTCGAAATTCTGGTTCCAGGTTGATG
ATGGTGATGGATCGGCCCCGGTCATCCACGACAACGAAGGGCAAGGATATGTGTTTCAACAGGACGAAATTATATATGTACCTTTACTCAGCCACAGTAACGGGCCAGCTGGCCCGAATG
GATTCGCTCAGTCCTTCGACTTTGTGGTGGGAGAGTCAGTAAGCCCGTCCGTGTGATGCGGATTTTTTTTTGATCACTTTTTATGCGTAGATTCGGAGTGGGAACAATGTTTCTCGTGCT
CAAATTCTTGGTCTCGATTATACCTTTCAAGAAAGCGGAGCCATCTTCAACTCGACTGTTGATCTCCAACATAATATCACCGGCTTTCTCGTCGAAGGATATGACTATTACAGCGGTCAG
GTCAACACAACTGGTTCTGTGCTTACGGTGGATATGGAGGTCGTAGTTGGTGACGTTTCCTTTGCCGTCGACTACCTCCCGGCGTTGGGCATGGTCGGCGTAGAGGAGCTTCTCTCATCT
GATCAACGGTCGCTCATTAACAATATAACGACGACTTCATCTTCAGCTGCCCCAAGCCCTACTACGCGCTCGCCGTCTTCGGCTGTGCTCTCGCTGCTTCCTCCACCATCCATATATCCA
GCCCTTCTGGGCATTTTCGTCTCGTTGGTTTGCTCCCTTGATCATTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGTTTTGGTTCCTTTCATCGTCCTGTCCTCTGTCCTGACTGCTGCATTGGCCTATACATGGCCTTCACCACAATACGATGCTCTCGAAAAGTTTCTTTATGAAGGAACTGATGTCAAT
GGCAACTTTATCGCCTTCATCACTACACATTGTGTGCATAGAACCACTCCTGCCTCGGGACGGCACCCATCAACAGTTGCTGCAGAATGGCTTCGCCTGGCGTACCATGACGCCGCGACA
CACAATGTCACGGATGGATCAGGGGGCTTAGATGGTTCAATACTGTACGAGCTCACCCGACCAGAGAACACTGGTGCTGCATTAACTAATTCTGCGGCTGATTTCCAGAACTCATCAAGT
AAATATATATCCCACGCCGATATCATCGCAATGGGTGCGGTATGGGGTATCGCTTCTTGCGGTGGCCCTTCTATTCCCTACCGAGGTGGCCGAATAGATGCAACAGGCCCGGGACGCACA
GGCGTCCCAGAACCCCAGCAGGATCTAGCTTCTCATACGGAGAGTTTTCGACTGCAAGGATTCACCCCTACCGAAATGATTGGCCTCGTCGCGTGCGGGCATACCCTTGGCGGTGTAAGG
AGTTTCGATTTTCCTTCCATCATTTTGGACCCAACTGGATTGAATATTTCGACATTCGACTCCACGACTAAATACGATCACGCCATAATCAGCGAATATCTAAACTCGTCGACAAATAAT
CCATTGATCCGGGTCGCGAATACCTCATTCGCATCCGACCTCCGCATATTTGGCAGCGATGGAAATGTAACGATGAAAAGTCTAAATTCGGAGAGTGCATACTTCCAAACGTGCACCACG
TTGCTAGCGAGGATGCTAAATACTGTGCCTTCAGATGTAACACTGACGGAAGAAATTGAACTACTTCCGGTCAAGGTCTGGAACGCCCAAATCACAGTGGTTAAGTCACAACTTATCTTT
TTTACTCTGTTACGACTCTCGCACTCAACTAACGTTGCACCTTCCGTAAATCGACAAGTAAAACTACTCTGGTGTGATAAACGTGGCCAATTCAAGGATTGTACCAAGATAACCAATGTC
GCTTCGTCTCAAGGAGGAGATTTTATCCCTTCAACATCTCCTTTGACCGAGTCCCAAAATATCACCTTCAGCTTCTACCATTTTGCTTTTCCCATCTCGGCCAACAGGTCGGTGTCGAAA
TTCTGGTTCCAGGTTGATGATGGTGATGGATCGGCCCCGGTCATCCACGACAACGAAGGGCAAGGATATGTGTTTCAACAGGACGAAATTATATATGTACCTTTACTCAGCCACAGTAAC
GGGCCAGCTGGCCCGAATGGATTCGCTCAGTCCTTCGACTTTGTGGTGGGAATTCGGAGTGGGAACAATGTTTCTCGTGCTCAAATTCTTGGTCTCGATTATACCTTTCAAGAAAGCGGA
GCCATCTTCAACTCGACTGTTGATCTCCAACATAATATCACCGGCTTTCTCGTCGAAGGATATGACTATTACAGCGGTCAGGTCAACACAACTGGTTCTGTGCTTACGGTGGATATGGAG
GTCGTAGTTGGTGACGTTTCCTTTGCCGTCGACTACCTCCCGGCGTTGGGCATGGTCGGCGTAGAGGAGCTTCTCTCATCTGATCAACGGTCGCTCATTAACAATATAACGACGACTTCA
TCTTCAGCTGCCCCAAGCCCTACTACGCGCTCGCCGTCTTCGGCTGTGCTCTCGCTGCTTCCTCCACCATCCATATATCCAGCCCTTCTGGGCATTTTCGTCTCGTTGGTTTGCTCCCTT
GATCATTGA

Retrieve as FASTA