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Entry information : GmarAPx-CcP07
Entry ID 11915
Creation 2013-05-27 (Christophe Dunand)
Last sequence changes 2013-05-27 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2017-04-19 (Catherine Mathe (Scipio))
Peroxidase information: GmarAPx-CcP07
Name GmarAPx-CcP07
Class Hybrid Ascorbate-Cytochrome C peroxidase    [Orthogroup: APx-CcP002]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Cortinariaceae Galerina
Organism Galerina marginata    [TaxId: 109633 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GmarAPx-CcP07
start..stop		 S start..stop
GmarAPx-CcP05 833 0 1..578 1..580
GmarAPx-CcP03 712 0 1..575 1..581
HcyAPx-CcP03 582 0 16..539 18..542
GmarAPx-CcP09 519 0 3..460 9..469
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '11915' 'complement(join(303278..303685,303737..304129,304183..304357,304421..304528,304589..304913,304977..305043,305097..305183,305246..305458))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 305246..305458 211 N° 2 305097..305183 85 N° 3 304977..305043 65 N° 4 304589..304913 323
N° 5 304421..304528 106 N° 6 304183..304357 173 N° 7 303737..304129 391 N° 8 303278..303685 406
complement(join(303278..303685,303737..304129,304183..304357,304421..304528,3045 89..304913,304977..305043,305097..305183,305246..305458))


exon

Literature and cross-references GmarAPx-CcP07
DNA ref. JGI genome:   scaffold_49 (305458..303278)
Cluster/Prediction ref. JGI gene:   79879
Protein sequence: GmarAPx-CcP07
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   591 (573)
PWM (Da):   %s   63409.85 (61441.8) Transmb domain:   %s   i7-29o
PI (pH):   %s   4.98 (4.98) Peptide Signal:   %s   cut: 19 range:19-591
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MVLSSFVVVSSFIITISAYTWPSPQYDALEKLLYEGSDISGVPIASITRGCATRGQPAEQKSTVAAEWLRLAYHDMATHNITDGTGGLDASIFFELNRPENIGAGMSDSVGDFQFSATKY
ISRADIIAMGAVWAVASCKGPSIPYRGGRIDAKGSGRLGVPEPQQDLASHTESFRLQGFLSTEMISLVACGHTLGGVRSLHFPNIVEDKRGNVLSTSTFDTTDAFDSAVLVEYLDSSTMN
PLIRVVNTTLASDLRIFSSDGNVTMKSLNSESAFLQACTTLLEKMINTVPSNVTLTDEIKLLPAKVTDAQITVCNSQLIFQTMLRLSHLNTVSTPKNRKVKLFWCDKRGQFKDCASITNV
ASAPESPPVEVSPLTESQSTTFIAYKFSVPMSANRSVAKFWFQVDEGDGSTPTIHDNDGRGYILPQDEIIHASSIGTIISDFTGDQLNHSFIFDAGIRSESNFTRAQIHASDYSSRGSGP
LLNTTIELQRNATKTFVEGYDLYTAHVATAGGGLNVDMEVIINGVSYAVDYISAATIDQLGPLSTITNITTSSISTAPGTNTSSPSSAVPMHLLPLVYLAASAVLLTSLLS*

Retrieve as FASTA  
Remarks Complete sequence from genomic (7 introns).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGTTCTCAGTTCATTCGTGGTTGTATCTTCCTTCATAATCACCATATCAGCCTATACATGGCCTTCGCCGCAATATGACGCTCTCGAGAAGCTCCTATACGAAGGTTCAGATATTAGC
GGAGTGCCAATTGCTAGCATCACCAGAGGTTGTGCGACGAGAGGACAGCCCGCAGAACAAAAATCAACGGTAGCTGCGGAATGGCTTCGTTTGGTATGCTTTCCATGGCCTTTTCTTCTT
ATCGTATTCAAAGTTCTGATGAGATATGAGATTAGGCGCGTACCACGATATGGCCACTCATAATATCACTGATGGAACAGGTGGGCTTGATGCCTCAATATTCTTTGAACTGAACCGACC
GGAGGTTCGTAACTCTCGCTCCCTCAATAATGTTTAACTAATCAATACTCTACTTAGAAAACATTGGTGCTGGCATGTCCGACTCCGTAGGGGACTTTCAATTTTCGGCTACCAAATACA
TATCCCGTTCGTCAATGTCGACCTCTCTAATCGATACATGGAACTGACCAACAGCGTTCTCATTTTAAGGTGTGCTGATATAATTGCCATGGGTGCTGTATGGGCCGTCGCATCGTGTAA
AGGCCCCTCCATTCCCTACAGAGGCGGGAGAATAGATGCGAAAGGCTCCGGACGCCTAGGTGTTCCTGAGCCGCAGCAGGATTTAGCCTCTCACACGGAAAGCTTTCGTCTTCAGGGATT
TTTGTCAACCGAGATGATCAGCCTCGTCGCATGCGGCCACACCCTTGGGGGCGTACGAAGTCTTCATTTCCCTAATATCGTTGAGGATAAACGAGGAAATGTGCTTTCGACCTCGACCTT
TGATACCACGGATGCTTTTGATTCTGCTGTGTTAGTGTTGATTCTCCTTTTTGTTATGGTGTCATATTGACCCTAGATTCTCAAAATTAGAGTAAGCGCGAATATTTGGATTCTTCGACG
ATGAACCCCCTGATCCGGGTTGTTAATACCACGCTCGCATCAGACCTGCGCATATTCAGTAGCGACGGAAATGTGACCATGAAAAGGTGTGTCATTTACGTTCTCCTTGGGAAGCAGTTC
CTTACCATAGTCTCTATTTAATCGCGTAGCCCCTAAACTCTGAAAGCGCTTTCCTCCAGGCATGCACAACCTTATTAGAAAAGATGATTAATACCGTTCCTTCCAACGTAACCTTGACAG
ATGAAATTAAATTACTCCCAGCGAAAGTTACAGACGCTCAAATCACCGTTTGTAACTCCCAATTAATCTTTCAAACTATGCTGCGTGTACGTCCCTCTTCATTGTTATATTCCACTGACT
TAGACCTTACTCTCTCCAGCTCTATCTCATCTAAATACAGTCTCTACGCCAAAAAATCGAAAAGTCAAATTATTTTGGTGTGATAAACGCGGGCAATTCAAAGATTGTGCTAGCATAACC
AACGTTGCGTCAGCCCCGGAAAGTCCGCCTGTGGAGGTATCACCCTTGACAGAGTCACAGAGTACGACTTTCATTGCATACAAATTTTCCGTCCCCATGTCTGCAAACCGATCCGTTGCG
AAATTCTGGTTCCAGGTCGACGAAGGCGATGGTTCGACTCCAACTATTCATGATAACGATGGGCGCGGGTATATACTACCCCAAGACGAAATTATACACGCATCATCAATTGGTACAATT
ATCTCGGATTTCACAGGCGATCAGCTGAATCACAGCTTCATCTTCGATGCAGGTGTAAGTAAACCCATCTCTGGTTGTCGTATTACCTCTAACCATTATTGATAGATATACGAAGTGAAA
GCAATTTTACTCGTGCCCAGATCCACGCGTCTGACTACTCGTCCAGGGGAAGTGGCCCTCTCCTTAATACGACAATCGAGCTCCAGCGCAATGCCACCAAAACGTTTGTGGAAGGATATG
ACCTATACACAGCTCACGTTGCAACGGCCGGAGGTGGGCTTAACGTGGATATGGAGGTTATCATAAACGGTGTTTCGTATGCAGTGGACTACATCTCTGCTGCAACAATCGACCAGCTTG
GGCCGCTTTCGACCATCACGAACATTACGACGTCTTCAATATCTACGGCGCCGGGCACTAATACAAGTTCGCCGTCCTCGGCTGTACCGATGCATTTATTGCCACTGGTCTATCTTGCTG
CTTCGGCTGTTCTTCTCACTTCGTTGCTTTCTTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGTTCTCAGTTCATTCGTGGTTGTATCTTCCTTCATAATCACCATATCAGCCTATACATGGCCTTCGCCGCAATATGACGCTCTCGAGAAGCTCCTATACGAAGGTTCAGATATTAGC
GGAGTGCCAATTGCTAGCATCACCAGAGGTTGTGCGACGAGAGGACAGCCCGCAGAACAAAAATCAACGGTAGCTGCGGAATGGCTTCGTTTGGCGTACCACGATATGGCCACTCATAAT
ATCACTGATGGAACAGGTGGGCTTGATGCCTCAATATTCTTTGAACTGAACCGACCGGAGAACATTGGTGCTGGCATGTCCGACTCCGTAGGGGACTTTCAATTTTCGGCTACCAAATAC
ATATCCCGTGCTGATATAATTGCCATGGGTGCTGTATGGGCCGTCGCATCGTGTAAAGGCCCCTCCATTCCCTACAGAGGCGGGAGAATAGATGCGAAAGGCTCCGGACGCCTAGGTGTT
CCTGAGCCGCAGCAGGATTTAGCCTCTCACACGGAAAGCTTTCGTCTTCAGGGATTTTTGTCAACCGAGATGATCAGCCTCGTCGCATGCGGCCACACCCTTGGGGGCGTACGAAGTCTT
CATTTCCCTAATATCGTTGAGGATAAACGAGGAAATGTGCTTTCGACCTCGACCTTTGATACCACGGATGCTTTTGATTCTGCTGTGTTAGTCGAATATTTGGATTCTTCGACGATGAAC
CCCCTGATCCGGGTTGTTAATACCACGCTCGCATCAGACCTGCGCATATTCAGTAGCGACGGAAATGTGACCATGAAAAGCCTAAACTCTGAAAGCGCTTTCCTCCAGGCATGCACAACC
TTATTAGAAAAGATGATTAATACCGTTCCTTCCAACGTAACCTTGACAGATGAAATTAAATTACTCCCAGCGAAAGTTACAGACGCTCAAATCACCGTTTGTAACTCCCAATTAATCTTT
CAAACTATGCTGCGTCTATCTCATCTAAATACAGTCTCTACGCCAAAAAATCGAAAAGTCAAATTATTTTGGTGTGATAAACGCGGGCAATTCAAAGATTGTGCTAGCATAACCAACGTT
GCGTCAGCCCCGGAAAGTCCGCCTGTGGAGGTATCACCCTTGACAGAGTCACAGAGTACGACTTTCATTGCATACAAATTTTCCGTCCCCATGTCTGCAAACCGATCCGTTGCGAAATTC
TGGTTCCAGGTCGACGAAGGCGATGGTTCGACTCCAACTATTCATGATAACGATGGGCGCGGGTATATACTACCCCAAGACGAAATTATACACGCATCATCAATTGGTACAATTATCTCG
GATTTCACAGGCGATCAGCTGAATCACAGCTTCATCTTCGATGCAGGTATACGAAGTGAAAGCAATTTTACTCGTGCCCAGATCCACGCGTCTGACTACTCGTCCAGGGGAAGTGGCCCT
CTCCTTAATACGACAATCGAGCTCCAGCGCAATGCCACCAAAACGTTTGTGGAAGGATATGACCTATACACAGCTCACGTTGCAACGGCCGGAGGTGGGCTTAACGTGGATATGGAGGTT
ATCATAAACGGTGTTTCGTATGCAGTGGACTACATCTCTGCTGCAACAATCGACCAGCTTGGGCCGCTTTCGACCATCACGAACATTACGACGTCTTCAATATCTACGGCGCCGGGCACT
AATACAAGTTCGCCGTCCTCGGCTGTACCGATGCATTTATTGCCACTGGTCTATCTTGCTGCTTCGGCTGTTCTTCTCACTTCGTTGCTTTCTTAA

Retrieve as FASTA