View Redoxidase 11914

Entry information : GmarAPx-CcP06

Entry ID	11914
Creation	2013-05-27 (Christophe Dunand)
Last sequence changes	2013-05-27 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2017-04-19 (Catherine Mathe (Scipio))

Peroxidase information: GmarAPx-CcP06

Name

GmarAPx-CcP06

Class

Hybrid Ascorbate-Cytochrome C peroxidase [Orthogroup: APx-CcP002]

Taxonomy

Eukaryota Fungi Basidiomycota Agaricomycetes Cortinariaceae Galerina

Organism

Galerina marginata [TaxId: 109633 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	GmarAPx-CcP06 start..stop	S start..stop
GmarAPx-CcP01	830	0	7..479	11..476
GmarAPx-CcP02	691	0	8..470	12..469
GmarAPx-CcP08	652	0	98..479	33..410
GmarAPx-CcP03	523	0	11..469	6..458

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '11914' 'join(983461..983694,983747..983833,983890..983956,984012..984336,984386..984505,984561..984735,984792..985247)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	983461..983694	232	N° 2	983747..983833	85	N° 3	983890..983956	65	N° 4	984012..984336	323
N° 5	984386..984505	118	N° 6	984561..984735	173	N° 7	984792..985247	454
join(983461..983694,983747..983833,983890..983956,984012..984336,984386..984505, 984561..984735,984792..985247)

Literature and cross-references GmarAPx-CcP06

DNA ref.	JGI genome: scaffold_10 (983461..985247)
Cluster/Prediction ref.	JGI gene: 95393

Protein sequence: GmarAPx-CcP06

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	487 (464)
PWM (Da):	52762.53 (50049.1)	Transmb domain:	i7-29o463-485i (o440-462i)
PI (pH):	4.96 (4.96)	Peptide Signal:	cut: 24 range:24-487

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MSITASFWIFFIPLSIVISFVSAEYTWPSAQHDALEQFLYEGTHVTGDNVAGLARFCLPRFLPGGDQPSSVAAEWVRLAYHDMATHNATDGTGGLDGSIFYELDRPENVGAGNVNTVGDF
KDHSSKLVSRSDIIAMGAVWAVAACGGPPIPFRYGRKDALKAGRSGVPEPQQNLASHIESFRLQGFTQKEMIGLVACGHTLGGVRGVDFQDIVPDPSISSIATFDTTSGLDSAFDHLIVT
QYLNSSTQNPLIRVPSGNSTFASDLRIFSSDQNATMKGLNSETSFSQTCTTLLAKMIDTVPSNVHLSDVVTLLPVKVSNAQITAIDSQLVFMTDLRVAFPAGISPTAASKVQMFWCDSRG
VFKNCNRVTNVASLPFLDEPSTSPLTDSLNIQLVLYRFKVQISASRSVSKFWFEIDGAIHNNGGNGYPIGQDEIIFVPSLGSVDPKFLQPDPANPSEFLPRNYNLVFGVSVTPLITNEFI
LIVIYCR*

Retrieve as FASTA

Remarks

Complete sequence from genomic (6 introns).

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGTCTATCACCGCTTCTTTCTGGATATTTTTTATACCGCTGTCAATAGTGATTTCATTTGTTTCAGCCGAGTATACCTGGCCGTCGGCACAGCACGACGCCCTCGAACAGTTTCTATAC
GAAGGCACCCATGTAACCGGTGACAATGTCGCCGGTTTGGCACGTTTCTGCCTTCCCAGATTTCTCCCTGGAGGAGACCAGCCATCTTCAGTCGCGGCCGAGTGGGTACGCCTGTGGTAA
GTGTATTCAAAATTCAAATGGTCGGAAGAGATTTGATCATATCATCAGGCATACCATGATATGGCTACTCATAATGCAACTGACGGTACAGGCGGGCTAGATGGTTCTATATTCTACGAA
CTTGACAGACCAGAGAGGTAAAAAAATCCAATGTAAATTTCCTAAAATACGACTCAAATTTTTGAAATAACAGAACGTCGGTGCCGGAAACGTCAACACGGTCGGGGATTTCAAGGACCA
TTCAAGCAAACTCGTATCTATAGTGAGAGACTGCCTAATTCGAAGTCGTCCTTGAAGCTAAACTGCTCGATTCAAAGGATCCGATATTATTGCGATGGGTGCCGTCTGGGCCGTGGCAGC
ATGTGGTGGTCCTCCGATACCATTCCGATATGGGAGGAAAGACGCCTTGAAAGCAGGACGATCTGGAGTTCCAGAGCCACAGCAAAATCTTGCCAGCCACATAGAAAGCTTCCGCCTTCA
AGGATTCACACAAAAAGAAATGATTGGACTTGTCGCATGCGGACATACCCTTGGAGGAGTTCGGGGCGTTGACTTTCAGGACATCGTGCCTGATCCATCGATTTCTAGTATCGCGACGTT
CGATACCACGTCCGGCCTCGACTCAGCCTTTGATCACCTTATATGTACGAATTCCTGCAGAGCAATTGGGGCAATGCTAATGCAAGGATTTAGTGTCACCCAATACTTAAACTCCTCCAC
TCAAAACCCTTTGATCAGGGTGCCGTCAGGAAATTCAACGTTCGCATCAGATCTGCGAATATTTAGCAGCGACCAGAATGCCACCATGAAAGGGGGTATGTAAAACCAAACATCTATATG
CTATTTAATCCACTAAATGGTGGTCTGTAGACTCAATTCCGAGACGTCTTTCTCCCAAACTTGCACGACACTACTAGCCAAGATGATAGACACTGTACCGTCAAATGTCCATCTGAGCGA
TGTAGTCACCCTCCTTCCGGTGAAAGTGTCCAACGCACAAATCACAGCGATCGATTCGCAGCTCGTTTTCATGACCGACCTCAGAGAGTATTATCGTGTTTATCCGTGGTGAATATGTCA
ATGTTTAATCGACTTTTCTTCAGGTGGCCTTTCCGGCTGGCATTAGCCCTACGGCAGCGAGTAAAGTCCAGATGTTCTGGTGCGACAGTCGTGGCGTATTCAAAAATTGCAATCGGGTCA
CCAATGTTGCATCGCTCCCATTCCTGGATGAACCAAGCACGTCTCCTTTAACCGATTCTTTGAATATCCAGCTCGTTTTGTACAGATTCAAGGTCCAGATTTCAGCTTCTCGCTCTGTTT
CCAAGTTCTGGTTTGAAATTGACGGTGCTATTCACAACAATGGAGGCAATGGCTACCCAATAGGTCAAGACGAAATCATATTTGTGCCGTCGTTGGGGAGCGTGGACCCGAAATTCCTTC
AACCTGACCCAGCAAATCCATCTGAATTTTTGCCGAGGAACTATAACCTGGTATTTGGTGTAAGTGTTACCCCCTTGATCACCAATGAATTCATTCTGATTGTAATTTACTGCAGATAA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGTCTATCACCGCTTCTTTCTGGATATTTTTTATACCGCTGTCAATAGTGATTTCATTTGTTTCAGCCGAGTATACCTGGCCGTCGGCACAGCACGACGCCCTCGAACAGTTTCTATAC
GAAGGCACCCATGTAACCGGTGACAATGTCGCCGGTTTGGCACGTTTCTGCCTTCCCAGATTTCTCCCTGGAGGAGACCAGCCATCTTCAGTCGCGGCCGAGTGGGTACGCCTGGCATAC
CATGATATGGCTACTCATAATGCAACTGACGGTACAGGCGGGCTAGATGGTTCTATATTCTACGAACTTGACAGACCAGAGAACGTCGGTGCCGGAAACGTCAACACGGTCGGGGATTTC
AAGGACCATTCAAGCAAACTCGTATCTAGATCCGATATTATTGCGATGGGTGCCGTCTGGGCCGTGGCAGCATGTGGTGGTCCTCCGATACCATTCCGATATGGGAGGAAAGACGCCTTG
AAAGCAGGACGATCTGGAGTTCCAGAGCCACAGCAAAATCTTGCCAGCCACATAGAAAGCTTCCGCCTTCAAGGATTCACACAAAAAGAAATGATTGGACTTGTCGCATGCGGACATACC
CTTGGAGGAGTTCGGGGCGTTGACTTTCAGGACATCGTGCCTGATCCATCGATTTCTAGTATCGCGACGTTCGATACCACGTCCGGCCTCGACTCAGCCTTTGATCACCTTATTGTCACC
CAATACTTAAACTCCTCCACTCAAAACCCTTTGATCAGGGTGCCGTCAGGAAATTCAACGTTCGCATCAGATCTGCGAATATTTAGCAGCGACCAGAATGCCACCATGAAAGGACTCAAT
TCCGAGACGTCTTTCTCCCAAACTTGCACGACACTACTAGCCAAGATGATAGACACTGTACCGTCAAATGTCCATCTGAGCGATGTAGTCACCCTCCTTCCGGTGAAAGTGTCCAACGCA
CAAATCACAGCGATCGATTCGCAGCTCGTTTTCATGACCGACCTCAGAGTGGCCTTTCCGGCTGGCATTAGCCCTACGGCAGCGAGTAAAGTCCAGATGTTCTGGTGCGACAGTCGTGGC
GTATTCAAAAATTGCAATCGGGTCACCAATGTTGCATCGCTCCCATTCCTGGATGAACCAAGCACGTCTCCTTTAACCGATTCTTTGAATATCCAGCTCGTTTTGTACAGATTCAAGGTC
CAGATTTCAGCTTCTCGCTCTGTTTCCAAGTTCTGGTTTGAAATTGACGGTGCTATTCACAACAATGGAGGCAATGGCTACCCAATAGGTCAAGACGAAATCATATTTGTGCCGTCGTTG
GGGAGCGTGGACCCGAAATTCCTTCAACCTGACCCAGCAAATCCATCTGAATTTTTGCCGAGGAACTATAACCTGGTATTTGGTGTAAGTGTTACCCCCTTGATCACCAATGAATTCATT
CTGATTGTAATTTACTGCAGATAA

Retrieve as FASTA