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Entry information : AtrPrx11(AmTr_v1.0_scaffold00045.53)
Entry ID 1211
Creation 2005-06-13 (Christophe Dunand)
Last sequence changes 2005-06-13 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-11-10 (Christophe Dunand)
Peroxidase information: AtrPrx11(AmTr_v1.0_scaffold00045.53)
Name AtrPrx11(AmTr_v1.0_scaffold00045.53)
Class Class III peroxidase     [Orthogroup: Prx021]*
Taxonomy Eukaryota Viridiplantae Streptophyta Amborellaceae Amborella
Organism Amborella trichopoda    [TaxId: 13333 ]
Cellular localisation N/D
Tissue type Flower buds
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AtrPrx11
start..stop		 S start..stop
AtrPrx07 543 0 1..339 1..338
EferPrx01 422 8.6e-149 25..326 24..324
EferPrx23 413 1.89e-145 25..326 25..325
GmPrx09 412 3.37e-145 1..327 1..327
Literature and cross-references AtrPrx11(AmTr_v1.0_scaffold00045.53)
Literature dePamphilis,C., Carlson,J., Ma,H., Soltis,D., Soltis,P.,Oppenheimer,D., Frohlich,M., Doyle,J., Tanksley,S., Webb,M., Leebens-Mack,J., Landherr,L., Ilut,D. and Wall,K.
unpublished (2003)
EST ref. GenBank:   CO995587 [3' end]
Protein sequence: AtrPrx11(AmTr_v1.0_scaffold00045.53)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   348 (325)
PWM (Da):   %s   37303.75 (34715.3)  
PI (pH):   %s   6.35 (5.67) Peptide Signal:   %s   cut: 24 range:24-348
Sequence
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MSPNFRTLCL FLIVVIAPAA VKCDLEIGFY DQTCQGAELL VFDAVARAVN ANPGIAAGLI RMFFHDCFVR GCDGSVLIDS TAGNSAEKDS PINNPSLRGF EVIDKAKAAI EAVCPKTVSC  ADVLAFAARD STALTGGLNF PVPAGRRDGR ISIASETFTN LPPPTFNATQ LEQSFARKNL TLEEMVTLSG AHSIGRSHCS SFVRRLYNFS STNQVDPTLD PGYATFLQSQ CPFNASTNNV 
TVVPMDVFTP NDLDVGYYVG LTQHFGLFTS DQTLLTNSST RPFVEENIVN PGVWAIRFAK AMIKMGKIEV LTGTTGEIRT NCRVINSAKS IGSVIDTLGH SSSKVAST* 

Retrieve as FASTA  
Remarks Complete sequence from genomic and sequence from 1 EST. Large part of 5’ sequence is missing. From early female flower buds
CDS►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGTCCCCCA ATTTTAGGAC GTTATGTTTG TTCTTGATTG TGGTGATTGC ACCTGCGGCA GTGAAGTGTG ACCTAGAAAT AGGCTTTTAT GATCAGACAT GTCAAGGGGC AGAGCTGTTA  GTCTTTGATG CAGTTGCAAG GGCTGTGAAT GCAAATCCTG GCATTGCTGC TGGCTTGATA AGAATGTTTT TCCATGATTG CTTTGTAAGG GGTTGCGATG GGTCTGTGCT AATAGATTCG  ACTGCGGGTA ACAGCGCTGA GAAGGACTCA CCGATTAATA ACCCAAGTCT TCGAGGTTTC GAAGTCATTG ATAAGGCCAA GGCTGCCATA GAGGCCGTCT GTCCCAAAAC TGTGTCATGC  GCCGACGTCC TAGCCTTTGC CGCCCGAGAC AGCACCGCCC TCACTGGCGG CCTCAACTTC CCAGTCCCTG CAGGCCGGCG TGACGGTCGC ATCTCCATAG CAAGCGAAAC CTTCACTAAT  CTCCCTCCTC CAACATTCAA TGCAACTCAA CTGGAACAAA GTTTCGCCCG GAAAAACCTC ACCTTAGAAG AAATGGTCAC TCTCTCAGGC GCACATTCCA TAGGCCGGTC TCATTGTAGC  TCATTCGTTC GCCGCCTATA TAACTTCAGC TCAACTAACC AAGTAGACCC CACTTTGGAC CCTGGCTATG CCACCTTCTT GCAAAGCCAG TGCCCCTTTA ATGCATCTAC TAATAATGTT  ACAGTGGTCC CAATGGATGT GTTTACACCA AATGATTTGG ATGTGGGTTA CTATGTTGGG TTGACTCAAC ATTTTGGGTT GTTTACTTCT GATCAAACAC TTTTGACCAA TTCTTCAACA  CGGCCTTTTG TGGAGGAGAA CATAGTGAAT CCTGGTGTTT GGGCAATCAG GTTTGCAAAG GCCATGATAA AAATGGGAAA GATTGAGGTT CTCACTGGAA CAACTGGAGA GATCAGAACT 
AATTGTAGGG TTATTAATAG TGCAAAATCA ATTGGTTCAG TTATTGATAC TTTGGGCCAT TCTTCTTCTA AGGTGGCTAG TACCTAA 

Retrieve as FASTA