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Entry information : LuRboh[P]218
Entry ID 12230
Creation 2013-05-29 (Qiang LI)
Last sequence changes 2013-05-30 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2013-05-30 (Qiang Li)
Peroxidase information: LuRboh[P]218
Name LuRboh[P]218
Class Respiratory burst oxidase homolog     [Orthogroup: Rboh001]*
Taxonomy Eukaryota Viridiplantae Streptophyta Linaceae Linum
Organism Linum usitatissimum (flax)    [TaxId: 4006 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LuRboh[P]218
start..stop		 S start..stop
PtRboh06 1054 0 13..631 129..909
LuRboh[P]232 1033 0 1..631 11..637
PtRboh07 1023 0 13..631 129..909
CclRboh05 1007 0 14..631 144..929
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '12230' 'join(708330..708368,708564..708665,708898..709029,709124..709237,709640..710005,710627..710709,710764..711010,711273..711485,712372..712508,712534..712566,712620..712936,713155..713264)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 708330..708368 37 N° 2 708564..708665 100 N° 3 708898..709029 130 N° 4 709124..709237 112
N° 5 709640..710005 364 N° 6 710627..710709 81 N° 7 710764..711010 245 N° 8 711273..711485 211
N° 9 712372..712508 135 N° 10 712534..712566 31 N° 11 712620..712936 315 N° 12 713155..713264 108
join(708330..708368,708564..708665,708898..709029,709124..709237,709640..710005, 710627..710709,710764..711010,711273..711485,712372..712508,712534..712566,71262 0..712936,713155..713264)


exon

Literature and cross-references LuRboh[P]218
DNA ref. Phytozome 12:   scaffold25 (708330..713264)
Protein sequence: LuRboh[P]218
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   631
PWM (Da):   %s   71811.9 Transmb domain:   %s   o165-187i247-269o289-311i332-354o
PI (pH):   %s   8.93
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
YVEITLDLRDDSVDRTKSAAAPALKGLKFISKADGGSGWVAVEKRFDISKFELKDFWDQISDQSFDSRLQTFFDMVDKDADGRITEEEVKEIITLSASANRLSNIQKQAEEYAALIMEEL
DPEHHGYIMSKNLSKLLSQKLKPTLDENPISRWLRNTKYFLLDNWQRVWVMALWMGVMAGLFAYKYIQYRDRSAYEVMGVCVCLAKGGAETLKLNMALILLPVCRNTITWLRNKTKLGVA
VPFDDNLNFHKVIAVAITIGVGIHAIAHLACDFPRLLAAYWHFVKSKEGVTGIIMVVLMAIAFTLATPWFRRNKLxNLPPFLKKLTGFNAFWYSHHLFVIVYTLLVVHGYYLYLTKEWYK
KTVAIYPGNVLALHMSKPNGFRYKSGQYMFVNCAAVSPFEWHPFSITSAPGDDYLSIHIRTLGDWTRQLRTVFIDGPYGAPAQDYKEYEVVLLVGLGIGATPMISILKDIVNNMKDEEDW
RTEGGPRGGRDAFNTRRAYFYWVTREQGSFDWFKGVMNEVAEVDRNHVIELHNYCTSVYEEGDARSALIAMLQSLHHAKNGLDIVSGTRVKSHFAKPNWRTVFKQVAVHHPNSRVGVFYC
GAPGLTKELRNLALDFSHKTTTKFEFHKENF

Retrieve as FASTA  
Remarks Pseudogene from genomic. No prediction. Some PS are missing. join(708330..708368,708564..708665,708898..709029,709124..709234,709637..710005,710627..710710,710765..711010,711273..711485,712372..712508,712534..712566,712620..712936,713155..713264)
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TACGTCGAGATCACCCTCGACCTCAGGGACGATTCCGTCTCGCCCTCCACAGCGTCAAAGCCGCCAACGGCGCAGACGAGGATCCGGAGATGACGCTCCTCGCCAAGGACCTCGAGAAGC
GGACGGCTTCCAACATAGGCTCCTCCGTGGTCCGAACTGCCTCGGCTAAGATCCGTCAAGTTTCTCAAGAGCTCAGGCGGCTCACTTCCGTCAACAGAAGACCGACGGGTAGACTTGACC
GTACAAAGTCAGCGGCGGCTCCTGCTCTGAAAGGTCTCAAGTTCATCAGCAAGGCCGACGGCGGCTCCGGATGGGTTGCCGTGGAAAAGAGGTTCGACACCAGATCACTGCTGATTCCCC
GGACGGGATGCTTCCCCGTGCTCGCTTCGGAGAATGTATAGGTGTGTATGCAGCCAAACTGTTGAGAATTTGCCTGAGAGAGAGGAGATGGTTTCTGCATTCTGAAAGCTTTTTTTGGTA
TGTGATGATTGGCAGGGATGAAGGAGTCCAAGGAATTTGCGTTGGAGTTGTATGATGCTCTGGCGAGGAAGAGAAACATTCAGAGGGATTCGATCAGCAAGTTTGAGCTAAAGGACTTCT
GGGATCAGATCTCTGATCAGAGCTTTGATTCTAGGCTCCAGACTTTCTTTGACATGGTTGATAAAGATGCAGATGGCAGAATTACTGAAGAGGAAGTCAAGGAGAGGTATGTCTGACTTT
ATAACCCAACCATAAGAGTTTGAAGATTTCATTTCTTTTGTTAATAATCTCTCAAAAGTAATGACTACTTTTTTATGCAGATCATCACCCTCAGTGCTTCTGCAAACAGACTCTCGAATA
TCCAGAAACAAGCAGAGGAGTATGCAGCTTTGATCATGGAAGAATTGGACCCAGAGCACCATGGATACATCATGTGGTAAAACTCAAAACCTGGAATTCGTTGTACTTAAAAAGGCGTGT
TTGGCAATAATAATCATGATTTTTACGAAAATTGAATTAAAACTAACGAAAAAAATTGATTTGAGATTGGAAGAAATTGTCAACGAAAGTATAAAGGATTTTTAACAGAATTTATTTTTC
CTTTTGAATAAATTGGAAAATTCTATTTGGAATCCTTATCTCTTAATCCAAATTCTTTCTACAATCTCAATGTCAACTCTTTTGTTTCTAAAGATTATAATTTTTGTTGCCAAACCAATC
CTAAATATAGATAGGTTTGTAATTTACCATTTTTTTCCTTATGTTATGATGCAAACAGATAGAGAACCTAGAAATGCTATTGCTGCAAGGACCAAACCAGTCAGTGAGAGCAGGAGAGAG
CAAGAACTTGAGCAAGCTGCTGAGCCAGAAGCTGAAGCCGACGCTGGATGAGAACCCAATAAGTAGATGGCTAAGAAACACAAAGTACTTCCTGTTGGATAACTGGCAGAGAGTTTGGGT
GATGGCTTTGTGGATGGGAGTTATGGCTGGTCTGTTTGCTTACAAGTATATCCAGTACCGTGACAGGTCTGCATATGAGGTCATGGGGGTATGTGTATGCTTGGCCAAAGGTGGAGCCGA
GACTCTGAAACTAAACATGGCTTTGATTTTGCTCCCCGTTTGCCGGAACACCATTACCTGGCTCCGCAACAAGACCAAGCTAGGTGTTGCCGTTCCTTTTGACGACAACCTTAACTTCCA
CAAGAGGTGATAATAAAAAAATGTGCTTATGTTTTTTTCTCTTATTTGCTACTAGGGTGTTCAAGCCGCTAAAAAAAAAGCTCGTTCATGACTCGGTTCAATTTTAAATGAGCCAAACTT
GAGATAGGGTATGTTTGACTTGTTAACCTTGCTAGAGCTCGAGCTCTAGAGCCAACTCGAATACTAGCTCGAGTATATGACTCGTTAGTAGACTCAATAATGCAACGTGTTTTTGCGTTG
AATACCATATACAATAAATCATATGTGATTTTTTATTGTGTTAACGAAAATGCAAGTGGATATGTTGTCTAGTTTTAATTACTTTATTTGAGAAAAGTAGAAACTTGTAAATTTTAGGAT
AGCTTGTTTTATAGCTTTTACTCATCAATGTGTTCTAGTGTACAAACTTGAATTTCTACTGAAATTGGACTAGGTTTTAATGAGCAAAGTTCAAGTTGAGCTCGAGTTTGGCTCGTCAAG
ACTAGTTAACGAGTCAGGCTCTAGCTCGAGACGAGCTAAAATTTTATAGCTCGAGCATAGTGAAATTTGGCTTGCTAGGTTCGTGAACAGCCCCATTTACTACCCTAGCCTTAGTAGCTG
ACAGTTTCTACCGTCTAATTTTCAAAGGTGATAGCAGTGGCGATAACAATAGGAGTAGGGATCCACGCCATAGCCCATCTGGCATGCGACTTCCCTCGCCTTCTCGCTGCGCGGATGAAG
AGAAATGGGAACTTATGCAGCCATTCTTCGGAGATCAACCTTCGAGCTACTGGCATTTCGTCAAGTCGAAAGAAGGGGTGACTGGGATTATTATGGTCGTTCTCATGGCAATAGCCTTCA
CACTTGCCACTCCTTGGTTCAGGCGCAACAAGCTCNNNAACTTGCCACCTTTCCTGAAGAAGCTCACCGGTTTCAATGCCTTCTGGTACTCTCACCATTTGTTTGTCATCGTCTACACTT
TGCTTGTTGTCCACGGTTACTACCTGTACCTTACCAAGGAGTGGTACAAGAAGAGACTGTAAGTTAATCCCTTTTTCTCCCCCTCCGTGCCTTGCGATGTTGTAATCAAAACCTGACCTG
TTTTATTGTTGGAATGACAGACATGGATGTACCTGGCAGTTCCAGTAGTGCTTTACGCCAGTGAGAGGTTGACAAGGGCACTTAGATCCAGCATCAAGGCAGTTACAATCAAGAAGGTAA
TAGTATGATTTTGATTCAAGCCAGTCCAGTCCTTTTCTTTGTGTATGGGGCTTTTCTGAGACATGATGAATGATGGTTAGGTGGCCATTTATCCTGGAAATGTGTTGGCACTTCACATGT
CAAAGCCTAATGGGTTCAGATACAAGAGCGGGCAGTACATGTTTGTGAATTGTGCAGCTGTGTCTCCATTTGAATGGCACCCGTTCTCCATAACTTCAGCTCCTGGAGACGATTACTTGA
GTATTCATATTAGAACCCTTGGAGATTGGACAAGGCAGCTGAGAACTGTCTCTTCCAGGAGGTACAAAAGATTACCCTTCCTGCTTTTTGTTATACTGTATCCAAGTAAAATGTTGATGA
TAATCAAGATGCCATTTTCCAAATGGTTTTTGTCTTGGTATAGGTGTGTCAGCCACCAACAACAGGGAAGAGTGGACTCCTCAGAGCCGATGAATTTCAGGGGAATAACAATCCCGAGTA
AGTACTCTTTTCTTTTGGGGAAAATAGGGGAAGTTGATGATGTAATAAACAACGAGGAAAGCTAGAAACCAAAAACTACTCACATGCGTACTACTGATCTCATTGTTAGTTGGCATATCA
AAAGAGAGAATATATATTCATCACAGTCCAAAGTGCATATGATAAGCCTTACAAAAAAGCTGTCGTCCTTTCTAGCCGGTATAAGCGTAAACAATGTTTAGGCGATCTAATAGTTTTTTA
GAGTATTATAAACCCTTTTCCAAATTTTCTAATAGAAAGTTTATCAACTAGTCTCATGACCACCATGTTCAGCAGCCAACAAGAGTGGCTGCTGATGAAAAAGTAAAGTAATGGCCAATG
GAACATTATTATGCAGAATAGCAGACCCTATACCCCACCGCACCAAACATGAGAAGCGAGTGTCGTTTGTTAGCTTTGAATAATGACAAAATATTAGATAAGACCAGTTGACGATAAGTG
AAGTTCTTAGTTAAGGATGTTTTGGATGAAGTATTTTATTTTGAGAGTAAATTAATTGAAATATCATAGTGGTAACTTAAAATGAGTTATTTAAAATGTCACAATTTTATAATTTTATAA
TTTTTTTTCGAATTGTCAAGAAAATAACCTATAACTCCCACAATTAGGAAACTGATGATGGTTGGTGGTAACTTGTGATTGGCAGCTTCCCGAGGATACTGATAGACGGACCATACGGAG
CACCAGCGCAAGACTACAAGGAATACGAGGTGGTACTGCTGGTGGGTCTTGGAATCGGAGCAACTCCGATGATCAGCATCCTCAAGGACATTGTGAACAACATGAAGGACGAGGAGAAGA
AGGGGTGAATAATAACGACAATGAGTTGGAGAACGGAGGGAGGTCCCCGAGGAGGGGCAGTCTCCGATCAGCCACCACAGTAATAATAATAATGCATCGAGCAGCAAGAGGAAGGACGCG
TTCAACACGAGGAGGGCCTATTTCTACTGGGTCACAAGGGAACAAGGCTCATTCGACTGGTTCAAAGGTGTCATGAATGAGGTCGCAGAGGTGGACCGAAACCACGTCATCGAGCTCCAT
AACTACTGTACGAGTGTCTATGAAGAAGGTGATGCCCGTTCTGCACTCATCGCCATGCTCCAGTCCCTTCATCACGCCAAGAATGGCCTGGACATTGTATCCGGAACACGTGTCAAGTCC
CACTTTGCCAAGCCTAATTGGCGTACAGTGTTCAAGCAAGTCGCTGTTCACCACCCTAATTCTCGAGAGTTGGTACGTATATACACTGTCGCTCCCTCTTTAATATTTTGTTTAGATATC
ATGGATTATATCTGAATTATTTCTCAATAACTCATTATCGTGATATAATTAGATGGTTGTTCTTAATTTCTTTAAATCTTGTAGTTCTGAATAAACACATTTTGTTTGCTGATAGAATAG
AATCTAATAGAGTTTGAAACTGATGTGGAGTGTTGCTGTTTTGTTGGCAGGTGTGTTTTACTGTGGGGCACCGGGATTGACGAAGGAGCTGCGAAACTTAGCTCTGGATTTCTCACACAA
GACCACCACCAAGTTTGAATTCCACAAAGAGAACTTC

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TACGTCGAGATCACCCTCGACCTCAGGGACGATTCCGTCGACCGTACAAAGTCAGCGGCGGCTCCTGCTCTGAAAGGTCTCAAGTTCATCAGCAAGGCCGACGGCGGCTCCGGATGGGTT
GCCGTGGAAAAGAGGTTCGACATCAGCAAGTTTGAGCTAAAGGACTTCTGGGATCAGATCTCTGATCAGAGCTTTGATTCTAGGCTCCAGACTTTCTTTGACATGGTTGATAAAGATGCA
GATGGCAGAATTACTGAAGAGGAAGTCAAGGAGATCATCACCCTCAGTGCTTCTGCAAACAGACTCTCGAATATCCAGAAACAAGCAGAGGAGTATGCAGCTTTGATCATGGAAGAATTG
GACCCAGAGCACCATGGATACATCATGAGCAAGAACTTGAGCAAGCTGCTGAGCCAGAAGCTGAAGCCGACGCTGGATGAGAACCCAATAAGTAGATGGCTAAGAAACACAAAGTACTTC
CTGTTGGATAACTGGCAGAGAGTTTGGGTGATGGCTTTGTGGATGGGAGTTATGGCTGGTCTGTTTGCTTACAAGTATATCCAGTACCGTGACAGGTCTGCATATGAGGTCATGGGGGTA
TGTGTATGCTTGGCCAAAGGTGGAGCCGAGACTCTGAAACTAAACATGGCTTTGATTTTGCTCCCCGTTTGCCGGAACACCATTACCTGGCTCCGCAACAAGACCAAGCTAGGTGTTGCC
GTTCCTTTTGACGACAACCTTAACTTCCACAAGGTGATAGCAGTGGCGATAACAATAGGAGTAGGGATCCACGCCATAGCCCATCTGGCATGCGACTTCCCTCGCCTTCTCGCTGCCTAC
TGGCATTTCGTCAAGTCGAAAGAAGGGGTGACTGGGATTATTATGGTCGTTCTCATGGCAATAGCCTTCACACTTGCCACTCCTTGGTTCAGGCGCAACAAGCTCNNNAACTTGCCACCT
TTCCTGAAGAAGCTCACCGGTTTCAATGCCTTCTGGTACTCTCACCATTTGTTTGTCATCGTCTACACTTTGCTTGTTGTCCACGGTTACTACCTGTACCTTACCAAGGAGTGGTACAAG
AAGTAGGTGGCCATTTATCCTGGAAATGTGTTGGCACTTCACATGTCAAAGCCTAATGGGTTCAGATACAAGAGCGGGCAGTACATGTTTGTGAATTGTGCAGCTGTGTCTCCATTTGAA
TGGCACCCGTTCTCCATAACTTCAGCTCCTGGAGACGATTACTTGAGTATTCATATTAGAACCCTTGGAGATTGGACAAGGCAGCTGAGAACTGTCCTGATAGACGGACCATACGGAGCA
CCAGCGCAAGACTACAAGGAATACGAGGTGGTACTGCTGGTGGGTCTTGGAATCGGAGCAACTCCGATGATCAGCATCCTCAAGGACATTGTGAACAACATGAAGGACGAGGAGAGTTGG
AGAACGGAGGGAGGTCCCCGAGGAGGGAAGGACGCGTTCAACACGAGGAGGGCCTATTTCTACTGGGTCACAAGGGAACAAGGCTCATTCGACTGGTTCAAAGGTGTCATGAATGAGGTC
GCAGAGGTGGACCGAAACCACGTCATCGAGCTCCATAACTACTGTACGAGTGTCTATGAAGAAGGTGATGCCCGTTCTGCACTCATCGCCATGCTCCAGTCCCTTCATCACGCCAAGAAT
GGCCTGGACATTGTATCCGGAACACGTGTCAAGTCCCACTTTGCCAAGCCTAATTGGCGTACAGTGTTCAAGCAAGTCGCTGTTCACCACCCTAATTCTCGAGCAGGTGTGTTTTACTGT
GGGGCACCGGGATTGACGAAGGAGCTGCGAAACTTAGCTCTGGATTTCTCACACAAGACCACCACCAAGTTTGAATTCCACAAAGAGAACTTC

Retrieve as FASTA