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Entry information : CbraPrx10 (g34546.t1)
Entry ID 12965
Creation 2014-09-09 (Christophe Dunand)
Last sequence changes 2014-09-09 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2015-09-10 (Christophe Dunand)
Peroxidase information: CbraPrx10 (g34546.t1)
Name (synonym) CbraPrx10 (g34546.t1)
Class Class III peroxidase    [Orthogroup: Prx079]
Taxonomy Eukaryota Viridiplantae Streptophyta Charophyceae Characeae Chara
Organism Chara braunii    [TaxId: 69332 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CbraPrx10
start..stop		 S start..stop
NhyPrx06 205 6.77e-64 221..411 2..189
CbraPrx11 193 4.92e-57 187..511 69..361
CbraPrx08 192 8.41e-57 187..511 74..366
NhyPrx03 189 4.38e-56 189..511 6..294
Literature and cross-references CbraPrx10 (g34546.t1)
Protein sequence: CbraPrx10 (g34546.t1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   514 (304)
PWM (Da):   %s   54516.09 (33276.9)  
PI (pH):   %s   10.69 (9.43) Peptide Signal:   %s   cut: 25 range:25-328
Sequence
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Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MFTEPRSRTA GDGKRQTRRR VASILTVESS AGNWTRARVM MHSPASLRSS AMAVAATATS NSRAFWVNTL RLRDMWIILW VCVPCFRPLP AGCTVALGIA DVHHHGDGSS APHSKTMMGM  AKPHALAVHR AALLNFPPPP PPPPAPTPSS IRSAPVIATT ATTITTVTTT TTVVSCSRKL AVGTAATLGR LDTSLYSPSR ERCLRRAIQR YATLQFRDRT RRMAPILLRL AFHDCVTRRS  GGRKGGGCDG SILLDSELSA EANDGLVGTT QVIDDIRRRS GRACGGVVPT RADTIAAAGI AAISAMGGPD GSAYGFRLGR RDVNATANMG GGAGDPLTLP DADEAVPITL DKVRQTGLSD  EEVVVLTLLA HSVGVAHCDH LVRRVGSNCK APADPSLTPQ HACFLAKACE SGNRTEVQFE RRTPFKLDDL HLALIYSQQA NLRFDQSMKT HPRTAAILLK YCKLSPACRK AAGLKPPPSS 
GGSGPSGQGS SLLRTNFIRA YVKMTLVGIN TDGN 

Retrieve as FASTA  
Remarks Complete sequence from RNA seq and genomic (scaffold_425, no intron). Contains a very long PS
CDS►
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGTTCACTG AACCTCGCTC GCGGACGGCG GGTGACGGAA AGAGACAGAC GAGGCGCAGA GTAGCTTCGA TCTTGACCGT CGAGTCGTCG GCCGGCAATT GGACTAGGGC GAGGGTGATG  ATGCACTCAC CGGCTAGCCT GCGCTCTTCA GCAATGGCGG TCGCAGCGAC AGCGACCTCG AATTCTCGTG CTTTTTGGGT GAACACCCTC CGTCTGCGGG ATATGTGGAT CATCCTTTGG  GTATGTGTGC CCTGCTTCCG TCCACTCCCT GCCGGTTGTA CCGTCGCCCT TGGGATCGCC GACGTCCACC ATCATGGCGA TGGCTCATCA GCGCCGCACT CAAAGACGAT GATGGGTATG  GCGAAGCCCC ATGCTCTGGC CGTACATCGA GCAGCTCTCC TTAACTTCCC TCCTCCTCCT CCTCCTCCTC CTGCTCCTAC TCCGTCGTCT ATTCGTTCTG CACCTGTTAT TGCTACTACT  GCTACTACGA TTACAACGGT CACAACAACT ACGACTGTTG TTTCTTGCTC ACGAAAGTTG GCCGTCGGTA CGGCGGCGAC GTTGGGCCGA TTAGACACTA GTCTTTACTC GCCCTCCCGA  GAGCGATGTC TGCGGCGGGC GATCCAGAGG TACGCGACAT TGCAATTCAG AGATAGAACG AGGAGGATGG CGCCTATACT TCTCCGGCTG GCCTTCCACG ATTGCGTGAC GAGGAGGTCA  GGAGGGAGAA AGGGAGGCGG TTGCGACGGG TCGATCTTGC TCGATTCGGA GCTGAGTGCC GAAGCCAACG ACGGACTGGT GGGAACCACG CAGGTCATCG ATGACATTCG TCGGAGGAGC  GGCCGGGCCT GTGGCGGAGT GGTCCCCACA CGAGCGGACA CCATCGCTGC TGCCGGAATC GCTGCGATCA GCGCCATGGG CGGCCCAGAC GGCTCCGCAT ACGGCTTTCG ATTGGGCAGA  AGAGACGTGA ATGCGACCGC AAACATGGGT GGGGGGGCTG GAGATCCACT CACACTGCCT GATGCAGATG AGGCGGTCCC GATCACCCTC GACAAGGTGC GACAGACCGG GCTTAGCGAC  GAGGAGGTGG TGGTACTCAC GCTCCTCGCT CACAGCGTCG GTGTCGCTCA CTGCGACCAC CTTGTCCGTC GCGTGGGCAG CAACTGCAAG GCCCCTGCGG ACCCTTCCCT CACGCCACAG  CACGCCTGCT TCCTCGCTAA GGCATGCGAG AGCGGCAATC GAACGGAAGT CCAATTCGAA CGCCGGACGC CTTTCAAGCT GGACGACTTG CATCTGGCAC TCATCTACAG TCAACAAGCG  AATCTGAGGT TCGATCAGAG CATGAAGACG CACCCCAGGA CGGCAGCCAT CCTGCTCAAG TACTGTAAGC TCTCGCCGGC TTGCAGAAAA GCCGCGGGTC TCAAGCCACC TCCGTCTTCT 
GGTGGCTCTG GCCCGAGCGG CCAGGGTTCG TCGCTGCTGA GGACGAACTT CATCCGGGCG TACGTCAAGA TGACTCTTGT GGGCATCAAC ACCGACGGTA ACTGA 

Retrieve as FASTA