View Redoxidase 12992

Entry information : BprAPx-R01 (Bathy04g00180)

Entry ID	12992
Creation	2014-11-19 (Bruno Savelli)
Last sequence changes	2014-12-04 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2014-12-04 (Christophe Dunand)

Peroxidase information: BprAPx-R01 (Bathy04g00180)

Name (synonym)

BprAPx-R01 (Bathy04g00180)

Class

Ascorbate peroxidase related [Orthogroup: APx-R001]

Taxonomy

Eukaryota Viridiplantae Chlorophyta Prasinophyceae Bathycoccus

Organism

Bathycoccus prasinos [TaxId: 41875 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	BprAPx-R01 start..stop	S start..stop
OlAPx-R	329	2.11e-112	119..365	72..314
OtAPx-R	325	5.41e-111	120..365	66..307
MpuAPx-R	278	8.03e-92	123..365	108..343
EUgAPx-R01	245	1.19e-80	124..365	1..235

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '12992' 'join(27067..28167)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	27067..28167	1099
join(27067..28167)

Literature and cross-references BprAPx-R01 (Bathy04g00180)

Cluster/Prediction ref.	Genebank: 19016044

Protein sequence: BprAPx-R01 (Bathy04g00180)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	366
PWM (Da):	40183.15
PI (pH):	8.05

Sequence
Send to BLAST
Send to Peroxiscan

*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

MTISSSSVLD ARARICERCC SYQHKKTRRR KSEPPFASSS SSSSTTTKVA AAAVVVASSS TQRNDENERT TSTTTKTHSN RRAFLVSSTS LFSLCVAAIA RYPLPSSKIA AHAATITIQN EEEVRKNLRQ VLESKIQKTK CPAVLRVAFH DAGTFNKASN DGGMNGSVLY ELGRPESFGL KRGLNPIKEV YEEMKVRGFG DDTGGVSLAD CIACAGAYAI ELTGGPKFLE SIPLGRRDAS SADPENRMPV ETLRGKEMRE HFQNLYGLSS QEMIALSGAH TIGQKGFGDP YTFDNEYFVT LKKDPWNLPN LTKDELEMNE HIGLLSDRYL AEDEENKKWI NKYAEDAGAF NKDFVEAYIK
LTTLGV

Retrieve as FASTA

Remarks

Complete sequence from DNA (chromo 4, no intron))

DNA ►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

ATGACGATAT CATCATCGTC GGTGTTGGAT GCGAGAGCGC GGATTTGTGA ACGATGCTGC TCGTATCAAC ACAAGAAAAC TCGGAGGAGA AAAAGTGAAC CGCCGTTTGC CTCGTCGTCA TCATCGTCAT CGACGACAAC GAAAGTTGCT GCTGCTGCTG TTGTTGTTGC GTCTTCTTCG ACACAGCGTA ACGACGAGAA CGAAAGGACA ACGTCGACGA CAACTAAAAC TCATAGCAAC AGACGAGCAT TTTTAGTCTC GTCCACTTCG TTGTTTTCTC TCTGTGTAGC GGCGATTGCT CGGTATCCTT TACCGTCGTC AAAAATCGCC GCCCACGCAG CAACAATAAC AATACAAAAC GAAGAAGAAG TACGAAAAAA TTTACGCCAA GTGCTCGAGA GTAAAATACA AAAAACAAAG TGTCCGGCGG TGTTGAGAGT TGCATTTCAC GACGCGGGAA CGTTTAATAA AGCGTCGAAC GATGGTGGAA TGAATGGGAG CGTTTTGTAC GAATTAGGAC GTCCAGAAAG TTTTGGTTTG AAGCGAGGAC TGAACCCGAT AAAAGAGGTG TACGAGGAGA TGAAAGTGAG AGGTTTCGGC GACGACACCG GCGGAGTATC GTTAGCGGAT TGCATAGCTT GCGCAGGAGC TTACGCAATC GAACTCACTG GTGGCCCAAA ATTCTTAGAA TCCATCCCGC TTGGACGTAG AGACGCTTCC TCTGCGGATC CAGAAAACCG CATGCCAGTC GAGACGCTTC GAGGAAAAGA GATGCGAGAA CATTTCCAAA ACTTGTACGG GTTATCCTCC CAGGAAATGA TTGCGCTTTC TGGAGCACAC ACGATAGGAC AAAAAGGATT CGGTGACCCG TACACTTTCG ACAACGAGTA TTTCGTGACG TTAAAAAAGG ATCCGTGGAA CTTACCAAAC TTAACCAAAG ACGAGTTGGA GATGAACGAA CACATCGGTT TGTTATCGGA CCGATACTTG GCTGAGGACG AAGAAAATAA AAAGTGGATT AATAAGTACG CCGAAGACGC TGGAGCGTTT AACAAAGATT TCGTCGAAGC TTACATCAAA
TTGACGACAT TAGGAGTGTA A

Retrieve as FASTA

CDS►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

Retrieve as FASTA