Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
332 (303) |
| PWM (Da): |
35454.95 (32500.4) |
Transmb domain: |
i7-29o |
| PI (pH): |
7.36 (7.36) |
Peptide Signal: |
cut: 30 range:30-332 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MGAPVNNGAF VLMILSSSLL LMNLGLVQAG LSPNFYIRSC PNVVQIVATV VSKHLKQDVT MGAPIVRMFF HDCFVEGCDA SVLLMSPNKT AERDAAPNLT LTQFDVIDEI KSGLEKACPG
VVSCADILAL AARDAVLQTG GPSWAVELGR RDGLKSSDFD AATHLPSSLS NAQALIDNFG SNGLSIRDVV TLSGAHTFGK THCSAVSRRL YGFSSSGGID PTLNKTYAMS LRKQCTLPTN
PNAKVPLDPS TPNKFDNIYY QDLLQGQGIF SSDSALVLDA RTKVFVTEYA NDEDSFRDQF GDAMIKLGRI GVLTGQQGQI RKRCGFVNSK SN
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Retrieve as FASTA
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| Remarks |
Complete sequence from genomic (uncorrect prediction from SymDB; part exons 2 and 3) and RNA seq (gba_locus_13175_iso_3_len_1649_ver_2). No EST found. |
CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGGTGCTC CAGTCAATAA TGGTGCATTT GTGTTGATGA TTCTGAGCTC AAGCTTGTTG TTAATGAATT TGGGGTTAGT TCAAGCTGGC CTAAGTCCAA ATTTCTATAT CAGATCTTGC
CCAAATGTTG TTCAAATTGT TGCTACTGTT GTTAGCAAAC ATTTGAAGCA GGATGTCACA ATGGGAGCTC CTATTGTAAG AATGTTCTTC CATGACTGCT TTGTGGAAGG TTGTGATGCA
TCTGTTTTGT TGATGTCCCC AAACAAAACT GCCGAAAGAG ATGCAGCACC AAATCTTACT CTAACCCAAT TTGATGTTAT TGATGAAATC AAGAGTGGTT TGGAAAAAGC TTGCCCGGGT
GTGGTTTCCT GTGCTGATAT TCTTGCTCTT GCTGCAAGAG ATGCTGTTTT ACAGACTGGA GGACCTTCCT GGGCTGTTGA GCTAGGTCGA AGAGATGGCC TTAAATCTAG TGACTTTGAT
GCAGCTACTC ACCTTCCTTC ATCTCTATCA AATGCCCAAG CGCTAATAGA TAACTTTGGC TCTAATGGTC TCAGCATCAG GGATGTTGTC ACTCTTTCAG GGGCTCATAC GTTTGGGAAA
ACACACTGCA GTGCTGTTTC AAGGCGCTTG TATGGATTCA GCAGTAGCGG TGGGATCGAT CCCACATTAA ATAAAACTTA TGCAATGAGC TTGAGAAAGC AATGCACATT GCCCACCAAT
CCAAATGCAA AGGTTCCTTT GGACCCATCA ACCCCAAACA AGTTTGACAA CATTTATTAC CAAGATCTGT TACAGGGCCA AGGCATTTTT TCTTCAGACT CTGCTCTGGT ACTCGATGCC
AGGACTAAAG TTTTTGTTAC AGAATATGCT AATGATGAGG ATTCTTTTCG CGATCAGTTT GGTGATGCCA TGATCAAATT GGGAAGGATT GGTGTTTTGA CAGGCCAACA AGGCCAGATT
CGTAAGAGAT GTGGTTTTGT GAATTCAAAG TCCAACTAA
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Retrieve as FASTA
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cDNA►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
AACCAGCACC AGAAGAGGGT TATTCAGGAA TACAAAAAAT AGCAATGTAA ACAATTTCAA AGAAAAAAAA CGAATGTCTA TCTCTGCATC TAATCTGGAG TCTTGGTCTT CAGTCTGGAC
GTTTGTGGAT GTAAAATTCA TGGTTAATGG ATCATACTTA TAATTTAAGC CCATTCAGAC CACTAGTACC TACAAGGATT AGGTTGTATA AAGGAATGTT TTGTTCAATG GGAGCAATAC
ACATGTAATG TAGTACAAGC CTTGGAATTT ACAGGGGATT CTAGCATTAT GGGTGCTCCA GTCAATAATG GTGCATTTGT GTTGATGATT CTGAGCTCAA GCTTGTTGTT AATGAATTTG
GGGTTAGTTC AAGCTGGCCT AAGTCCAAAT TTCTATATCA GATCTTGCCC AAATGTTGTT CAAATTGTTG CTACTGTTGT TAGCAAACAT TTGAAGCAGG ATGTCACAAT GGGAGCTCCT
ATTGTAAGAA TGTTCTTCCA TGACTGCTTT GTGGAAGGTT GTGATGCATC TGTTTTGTTG ATGTCCCCAA ACAAAACTGC CGAAAGAGAT GCAGCACCAA ATCTTACTCT AACCCAATTT
GATGTTATTG ATGAAATCAA GAGTGGTTTG GAAAAAGCTT GCCCGGGTGT GGTTTCCTGT GCTGATATTC TTGCTCTTGC TGCAAGAGAT GCTGTTTTAC AGACTGGAGG ACCTTCCTGG
GCTGTTGAGC TAGGTCGAAG AGATGGCCTT AAATCTAGTG ACTTTGATGC AGCTACTCAC CTTCCTTCAT CTCTATCAAA TGCCCAAGCG CTAATAGATA ACTTTGGCTC TAATGGTCTC
AGCATCAGGG ATGTTGTCAC TCTTTCAGGG GCTCATACGT TTGGGAAAAC ACACTGCAGT GCTGTTTCAA GGCGCTTGTA TGGATTCAGC AGTAGCGGTG GGATCGATCC CACATTAAAT
AAAACTTATG CAATGAGCTT GAGAAAGCAA TGCACATTGC CCACCAATCC AAATGCAAAG GTTCCTTTGG ACCCATCAAC CCCAAACAAG TTTGACAACA TTTATTACCA AGATCTGTTA
CAGGGCCAAG GCATTTTTTC TTCAGACTCT GCTCTGGTAC TCGATGCCAG GACTAAAGTT TTTGTTACAG AATATGCTAA TGATGAGGAT TCTTTTCGCG ATCAGTTTGG TGATGCCATG
ATCAAATTGG GAAGGATTGG TGTTTTGACA GGCCAACAAG GCCAGATTCG TAAGAGATGT GGTTTTGTGA ATTCAAAGTC CAACTAATTA ATTTGTGGGC TTTGGCAAAG AGGGAATGAC
AGAGAATAAC AAAACTGTAA AAATGTTAAT TAGTTTCCAT GTGATGTTAT TGATATTCAA TAATCCAAAT CTTATGCACT TCTTCAAACC TAAGTTTAAA GCACGAGGGC ATGGGCTTGT
GAAGAAAAGA TGGCATCCAA AAGCAGAAAA ACAGGGATAT TGGTGCCATT GAAGTGGAAG AGGAGTGAAG AAAAGACATG AAATGATAAG AATGGAGTCT CAATTTTGTA ATGTGAAAAA
AACATAGTTT GAGTACCCAT GTTGTTGGAT GTATTATTAT TCTCTGGTTT GAAGTGGATA TATATATAGT GTGGATTGGT GGTCAAAAA
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Retrieve as FASTA
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