Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
357 (335) |
| PWM (Da): |
39255.6 (36839.3) |
Transmb domain: |
i7-25o |
| PI (pH): |
4.48 (4.41) |
Peptide Signal: |
cut: 23 range:23-357 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MERNSRLLGA ILTLMFILSV SAFSAKEFRD DLPEPVEGLS WRFYDESCPN VESIVNATLD SFLEEDITQA AGLLRLYFHD CFVQGCDASI LLDGTASDPS EQEAAPNLTL RAEAFEIINA
IKAAVEAVCS GVVSCADILT LATRDSIKKA GGPEYAVPLG RRDSLNYANQ SVTEQNLPPP TANVTQLMSI FGPKGFNMTD LVALLGGHSI GISHCASFTN RLYPTLDPTL DPTFAKYLYL
ICPTNTVVNT TNLDIRTPNL FDNKYYVDLQ HRQVLFTSDE ALILNSTTRH IAKSFGQNEK LFFHRFMLAM LKLSQLDVLT GSDGEIRKNC SVSNSNSDHY SIYSIFDTDE ESPISLM
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Retrieve as FASTA
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| Remarks |
Complete sequence from genomic (no prediction from SymDB, scaffold787) and RNA seq (gba_locus_53356_iso_1_len_896_ver_2.: f:ragment and 3'end are missing). No EST found..
Several ORF in the scaffold. |
DNA ►
Send to BLAST
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGAGAGGA ATAGCAGGCT TCTCGGTGCT ATTTTAACTT TGATGTTTAT ATTGTCTGTC AGTGCTTTTT CTGCAAAGGA ATTCAGGGAT GATCTGCCGG AGCCAGTTGA AGGTCTTTCA
TGGAGATTCT ACGACGAGAG TTGCCCCAAC GTGGAGTCCA TAGTCAATGC TACTCTCGAC TCTTTCTTGG AAGAAGATAT CACCCAAGCT GCTGGATTGC TCAGACTCTA CTTCCACGAC
TGCTTCGTCC AGGTATAATC GCATATTTTA CATGAAATTT GCTCAATCCG AAATGTTTTT CGTTGATAGC ATGATCATAT GGACATTAAT TTCTTCTGGC AGGGCTGCGA CGCATCCATC
TTGTTAGACG GGACGGCCAG CGATCCAAGT GAGCAGGAGG CTGCTCCAAA CTTGACACTT AGAGCGGAGG CCTTCGAGAT AATTAATGCT ATCAAAGCCG CAGTCGAGGC CGTCTGCAGC
GGCGTTGTAT CGTGTGCTGA CATCCTGACT TTAGCAACTC GCGATTCCAT CAAGAAGGTG AGTAATATTC AATCTTTTTT TTATTGCTTC TCAAGGGCAA TATGCCTAAC ATCAATTTGT
TATGAATTAG GCTGGAGGAC CAGAGTATGC TGTGCCGCTT GGCCGCAGAG ACAGCCTCAA CTATGCCAAT CAATCAGTTA CTGAACAAAA CTTACCTCCT CCAACTGCGA ATGTAACACA
ATTGATGAGC ATTTTTGGTC CGAAAGGGTT TAATATGACA GATCTTGTGG CGCTTTTAGG TTAGTTGATT TTGCCCAAAA CAGTTTATGT TATATTAAAT CCAGTTTAGA GGTAGTTGAA
TTAGTCAAGA TTGAGCATCG TTAATTATTG TATTGAATGT TTTTTTTCTA CAGGTGGGCA CAGCATTGGC ATCAGCCACT GTGCCTCCTT CACAAATAGA CTGTACCCTA CTCTGGATCC
AACTCTCGAC CCAACTTTTG CAAAGTATCT ATATTTGATA TGCCCCACTA ATACCGTCGT CAACACCACC AATCTGGACA TTCGCACTCC AAATCTGTTT GACAACAAGT ACTACGTCGA
TCTACAACAT AGACAAGTCC TCTTCACCTC CGACGAGGCT CTCATCCTCA ACTCCACCAC TCGACACATC GCCAAAAGCT TCGGTCAGAA CGAGAAATTG TTCTTTCACC GCTTCATGCT
CGCAATGCTC AAGTTGTCTC AACTTGATGT ACTCACTGGA AGCGACGGGG AGATCCGCAA GAATTGCTCC GTTTCCAATT CGAATTCCGA TCACTATTCA ATATACTCGA TATTCGATAC
AGATGAGGAA TCACCGATAT CTTTGATGTG A
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGAGAGGA ATAGCAGGCT TCTCGGTGCT ATTTTAACTT TGATGTTTAT ATTGTCTGTC AGTGCTTTTT CTGCAAAGGA ATTCAGGGAT GATCTGCCGG AGCCAGTTGA AGGTCTTTCA
TGGAGATTCT ACGACGAGAG TTGCCCCAAC GTGGAGTCCA TAGTCAATGC TACTCTCGAC TCTTTCTTGG AAGAAGATAT CACCCAAGCT GCTGGATTGC TCAGACTCTA CTTCCACGAC
TGCTTCGTCC AGGGCTGCGA CGCATCCATC TTGTTAGACG GGACGGCCAG CGATCCAAGT GAGCAGGAGG CTGCTCCAAA CTTGACACTT AGAGCGGAGG CCTTCGAGAT AATTAATGCT
ATCAAAGCCG CAGTCGAGGC CGTCTGCAGC GGCGTTGTAT CGTGTGCTGA CATCCTGACT TTAGCAACTC GCGATTCCAT CAAGAAGGCT GGAGGACCAG AGTATGCTGT GCCGCTTGGC
CGCAGAGACA GCCTCAACTA TGCCAATCAA TCAGTTACTG AACAAAACTT ACCTCCTCCA ACTGCGAATG TAACACAATT GATGAGCATT TTTGGTCCGA AAGGGTTTAA TATGACAGAT
CTTGTGGCGC TTTTAGGTGG GCACAGCATT GGCATCAGCC ACTGTGCCTC CTTCACAAAT AGACTGTACC CTACTCTGGA TCCAACTCTC GACCCAACTT TTGCAAAGTA TCTATATTTG
ATATGCCCCA CTAATACCGT CGTCAACACC ACCAATCTGG ACATTCGCAC TCCAAATCTG TTTGACAACA AGTACTACGT CGATCTACAA CATAGACAAG TCCTCTTCAC CTCCGACGAG
GCTCTCATCC TCAACTCCAC CACTCGACAC ATCGCCAAAA GCTTCGGTCA GAACGAGAAA TTGTTCTTTC ACCGCTTCAT GCTCGCAATG CTCAAGTTGT CTCAACTTGA TGTACTCACT
GGAAGCGACG GGGAGATCCG CAAGAATTGC TCCGTTTCCA ATTCGAATTC CGATCACTAT TCAATATACT CGATATTCGA TACAGATGAG GAATCACCGA TATCTTTGAT GTGA
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Retrieve as FASTA
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