Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
328 (300) |
| PWM (Da): |
35615.54 (32605.0) |
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| PI (pH): |
4.99 (4.67) |
Peptide Signal: |
cut: 29 range:29-328 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MTKAMLNCRA NLSLISFGIL CICTVSRAEL TANFYEKSCP NVLTIVREVV RRAIIDETRM AASLVRLHFH DCFVNGCDGS LLLDGTDGEK TAGPNVNSAR GFEVIDTAKT ALENACNQTV
SCADILAIAA QYSVHFSGGP TWPVLLGRRD GLTANKSGAN SGIPSPFDPL ETINSKFENV GLNATDVVIL SGAHTFGRAR CATFSSRLFD FNSTGNPDVT IETTFLSELQ SLCPQGGDSS
TLAPLDRNSI DWFDNHYFKN LQNNIGILQS DQELYSTTDA ATKSLVDFYS SNQDSFYQDF KFSMIKLANI NPLTGTDGEI RKNCRFVN
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Retrieve as FASTA
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| Remarks |
Complete sequence from genomic (no prediction from SymDB, scaffold33781) and RNA seq (gba_locus_72815_iso_1_len_320_ver_2, short 5'end and gba_locus_74026_iso_1_len_418_ver_2, fragment). No EST found. |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
TTAATAACTT ATAATAACAA TGATGATGCA TGTAATTATG AAATAAAAAA TCATTACATA TATGAAAATT AGTTATGCTT AAAAATAAGT AGAGTTTTTT TCACTTGGAT ACTAAATTTT
CACATTTTGA GAATGAGCTT TGGATAATCC TTGCTTACTA GATCAAATGA TATTTTAAAT TTATAATGAT GCATTTATAA ATGTTTGTAA TTAAAGAATA CATTGAAAAT GATTTGAAAT
ATATTTTTTA CTAATTTGAT AATGCATTTA TTTGTTGATT GTAATATAAA TAGATTAATT TCTACCTAGT GTTTAATTAT TATAATTAAT AATAATATAA CATAATAGTA TTTGTTCACT
AGTGGGACAT GATGGTGCCT AATATAGACA ACATCATACC CTTTTTGTCA TAAAATAAGA ACAAACATGG TACCACTTAG CTCACAACCT TGTTGTGCCT TTCTTTTTTT ATACATTAAA
TAAAATATGA CGTAATAACA AATAACATGT TTCATCATTG CACATCATAT GCCACATTAC AATAGAATTT ATAACTTTGG AGAGTCTAAG AAGCTTATTT AATCCACTTT ATTTATAACA
TATAATTATT TAGTGCCGCA ATGACACAAA TCTTATAAAT TGTGGTACAC ATGTGACATA TTATGTAGCA AAATTGTGGC ATATATATGA CACATAAATG CCCTAATATG ACATCTATAT
GACGCACATA TGGCATATAC AAGGCATGTA TTTGTAACTA TAATGTGGCA CATGTATACA TGATGCACAT GCACCTTGCT AACTCAAGGT ATAAATGAGT GTGGTTGTTA CATTATGACA
TATAATGTGG CATAGTGCGA TAAATATATG TGACACTATG CCACCTTTTA TGATATTCGC GTAGTAATAA AGGTGTGATA AGGAGGCATC TAGATTATAG ATTTTTTCGA ACACAAAAAT
AAATTAAAAT TGTACCGTTG ATGTGCCATA AATTGATCCC AAATTTAGCA TTGTTTCTAT AAACTAATAC TTATAATGAC TTTTGTGCAC ACACATTATC ATTTATGATC ATGAAGTATA
TTGTATGCTA TTGCTATTAA AAAAGAAAAA TAAATAGTGG CTATAGGTTA TTAAAGTAAT GGCATCTAGA TGCATAGTAC TAGAATTATA TAGATTATTA AAGTAATGGC ATCTAGATGC
ATAGTACTAG AATTATCATA GAAGAGGTCA AAAGTTGTAG TTGAATCTAT TCTTTACAAT AAAATTTGGT TTTCAATATT GGAAATAAAT AAATTAAATT TTGATGGTCC TTTAAATTAT
TTCCATGCAA GTGCGCATTG AGCTATCACC TTGCAAGTGC CTCTTGACTT ATAAAATTGG GAAAAAATGT TAATGCGATG AAACCACCTA AACACATGAA CTTGGGCTGA TAAAAAAATT
TACAAACTAA ATCTTAATAT ATCAAAGATA CGAAGAAGTC CACTATGCGA AACACGACTT TCGTCATACA ACGCAATTGT ATTTTTGGAA ATGTGGATGA ATAATAATGC TCCAATATTT
CGTTATCGTT ATCGAATAGG GAATTAGTGG GGAGGTGTTA AATCTAAGAA TTGGTGGGAC GCAATTGGTA AGAATCCGTG AAGTGATATT TTATTTGTAT ATGGTATCTC GCAATAGGTT
CGTTACAAAA GTAGCGTAAT TATTTAGTTT TGTGCTCGTG CATGTATGAC AAAAGCAATG CTTAATTGCA GAGCTAATTT GTCTTTGATA AGCTTTGGAA TACTTTGCAT TTGCACAGTC
TCAAGGGCTG AGTTGACGGC TAACTTCTAT GAGAAGTCCT GTCCAAACGT CCTCACTATC GTTCGAGAAG TTGTGAGGCG AGCAATTATA GACGAAACCC GTATGGCTGC GTCTCTCGTG
CGATTACACT TTCACGATTG TTTTGTGAAC GTGAGCACTC TCTTTACTTG GCAACAACAT ACGTCGTTTT CCTAATCATT ATTATATCGC TTACATTTAT ATTATCATTA CAATGCCCAA
CAATGTCATC AGCTAATCCT TATCGATTCT TACTTTTAAC ATCAAATGCC AAATATTAAC TGCCCTCGAG TCTCTCTTTT CTTGCTTCTA ACTTTTACGT TGCATGCCGT CTTTGGGATC
AGCTCAAGTT GATGCATAAG AAGCTCCCTG GCCATCTATT ATTGTTTTGG GTTTTTGCTT TCATATTCTC ATCATCATGT GAACAATCAT TTATTGCGTC ATGCGATGCG ATTTTCTTTG
GTAACATGTT TCTTAAATAA AACGTTTTAG TCGTTAACAC TGTTCGTAAG TTATTCTAAT GAAACTGTTT CACTGTGCCT CTGTAGGGTT GTGATGGATC TCTGTTGTTG GACGGCACGG
ATGGAGAAAA GACAGCTGGG CCAAATGTAA ATTCCGCGCG AGGGTTCGAA GTGATAGATA CAGCCAAGAC AGCTCTGGAG AACGCATGCA ACCAAACTGT TTCCTGCGCA GATATCCTCG
CTATTGCAGC GCAATACTCT GTTCACTTTG TACGTATCCA TGATTAATTT ATCGATTGAT ACACACAGTT TCCAATTATT TATATCAATT TATCAATCAA TTATTTATAA TAATTATTAC
TAATCTGTTG TCCAGAGCGG AGGTCCAACG TGGCCTGTCC TGCTAGGGAG AAGGGACGGC CTAACTGCAA ACAAGAGTGG AGCCAACAGC GGCATTCCAT CCCCGTTCGA TCCCCTAGAA
ACAATTAACT CCAAATTTGA GAACGTTGGC CTCAATGCAA CGGACGTTGT TATCTTGTCA GGTTTGTATC ATATCATCAT TTTTTAAAGT TGAACTCCGG CCAAAAAAAG GGTTTTTCTG
TTTTAAAAAA AATAAAAAAT TGATGGAGTT GCCTAAATTC AGGATGACAC TTACAATGAT CATCATTGAT ATTTGTGTCT TGTTCAGGAG CTCACACATT TGGGCGTGCC CGCTGTGCAA
CCTTTAGCAG CCGCCTATTC GATTTTAATA GCACTGGCAA CCCTGACGTG ACGATTGAAA CGACTTTTCT CTCTGAACTT CAGAGTCTTT GCCCCCAAGG TGGAGACAGC AGTACGTTGG
CACCTCTGGA TCGCAATTCA ATAGACTGGT TTGACAACCA CTATTTCAAA AATCTACAGA ACAATATTGG TATTTTGCAG TCTGATCAGG AGCTATACTC CACTACTGAC GCGGCAACTA
AATCCCTTGT AGACTTTTAT AGCAGCAATC AGGATAGTTT CTATCAAGAC TTCAAGTTCT CCATGATCAA ATTGGCAAAT ATAAATCCAC TTACTGGCAC AGATGGTGAG ATTCGGAAAA
ATTGCAGATT TGTAAATTAG
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGACAAAAG CAATGCTTAA TTGCAGAGCT AATTTGTCTT TGATAAGCTT TGGAATACTT TGCATTTGCA CAGTCTCAAG GGCTGAGTTG ACGGCTAACT TCTATGAGAA GTCCTGTCCA
AACGTCCTCA CTATCGTTCG AGAAGTTGTG AGGCGAGCAA TTATAGACGA AACCCGTATG GCTGCGTCTC TCGTGCGATT ACACTTTCAC GATTGTTTTG TGAACGGTTG TGATGGATCT
CTGTTGTTGG ACGGCACGGA TGGAGAAAAG ACAGCTGGGC CAAATGTAAA TTCCGCGCGA GGGTTCGAAG TGATAGATAC AGCCAAGACA GCTCTGGAGA ACGCATGCAA CCAAACTGTT
TCCTGCGCAG ATATCCTCGC TATTGCAGCG CAATACTCTG TTCACTTTAG CGGAGGTCCA ACGTGGCCTG TCCTGCTAGG GAGAAGGGAC GGCCTAACTG CAAACAAGAG TGGAGCCAAC
AGCGGCATTC CATCCCCGTT CGATCCCCTA GAAACAATTA ACTCCAAATT TGAGAACGTT GGCCTCAATG CAACGGACGT TGTTATCTTG TCAGGAGCTC ACACATTTGG GCGTGCCCGC
TGTGCAACCT TTAGCAGCCG CCTATTCGAT TTTAATAGCA CTGGCAACCC TGACGTGACG ATTGAAACGA CTTTTCTCTC TGAACTTCAG AGTCTTTGCC CCCAAGGTGG AGACAGCAGT
ACGTTGGCAC CTCTGGATCG CAATTCAATA GACTGGTTTG ACAACCACTA TTTCAAAAAT CTACAGAACA ATATTGGTAT TTTGCAGTCT GATCAGGAGC TATACTCCAC TACTGACGCG
GCAACTAAAT CCCTTGTAGA CTTTTATAGC AGCAATCAGG ATAGTTTCTA TCAAGACTTC AAGTTCTCCA TGATCAAATT GGCAAATATA AATCCACTTA CTGGCACAGA TGGTGAGATT
CGGAAAAATT GCAGATTTGT AAATTAG
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Retrieve as FASTA
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