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Entry information : SpolPrx35 ( Spipo23G0034100)
Entry ID 13238
Creation 2015-06-09 (Christophe Dunand)
Last sequence changes 2015-06-09 (Christophe Dunand)
Sequence status complete
Reviewer Catherine Mathe
Last annotation changes 2016-02-24 (Catherine Mathe)
Peroxidase information: SpolPrx35 ( Spipo23G0034100)
Name (synonym) SpolPrx35 ( Spipo23G0034100)
Class Class III peroxidase    [Orthogroup: Prx019]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Araceae Spirodela
Organism Spirodela polyrhiza (great duckweed)    [TaxId: 29656 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SpolPrx35
start..stop		 S start..stop
LminPrx02 538 0 1..323 1..322
CescPrx85 509 0 23..323 10..310
CescPrx86 499 3.87e-180 10..322 1..313
NnPrx34 477 3.54e-171 3..322 10..328
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 2073446..2073509 62 N° 2 2073769..2073917 147 N° 3 2074015..2074203 187 N° 4 2074278..2074443 164
N° 5 2074509..2074915 405  
join(2073446..2073509,2073769..2073917,2074015..2074203,2074278..2074443,2074509 ..2074915)


exon

Literature and cross-references SpolPrx35 ( Spipo23G0034100)
DNA ref. Phytozome 12:   pseudo23 (2073446..2074915)
Cluster/Prediction ref. Phytozome Gene 12:   31516799
Protein sequence: SpolPrx35 ( Spipo23G0034100)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   324 (300)
PWM (Da):   %s   35440.84 (32852.4)  
PI (pH):   %s   6.51 (6.51) Peptide Signal:   %s   cut: 25 range:25-324
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MERGSGLTSLLLLLLLLSSSYGNAELSRSYYAQSCPRAEEIVKEQVKLLYEKHGNTAVSWLRNLFHDCMVGGCDASILLVAAGGAMSEQTSQRSFGMRNFKYVATIKDALERECPKTVSC
ADIVALSARDGVALLGGPYVPMKMGRKDSRVSRLEAVEDSIPNHDSDISLVLSRFQSIGIGAEGTVALLGAHSVGRVHCVNLVHRLYPAVDPTLDPDYAAYLKGRCPSPEPDPAAVAYGR
NDRETPMTIDNMYYKHLLQHKGLLRVDQQLASDPSTAPFVAKMAADNGYFYERFAEALLLLSETNPLPSDQGEVRKDCRFVNSV*

Retrieve as FASTA  
Remarks
Promoter►
Send to BLAST
Send to cis Analysis
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
AATTGTATGG TGGAACTCTA TTTTTGCCTG ATTTGTGTTC TTCGAGCATT GACGTCACCT CTGATGTCAT CGCCTTATTT CCTTTTTCAC GAATTCTTAA ATATATTATA TTTATAGTTC  AGTTAAAAAA TTACAAAAAA TCGTATTCTT TTAGGAAAAT TCTAAAATAT TACTCGATAT TATATTACAT CCCTATGATT GATATAAAAA TTTTTCACTA TTTTTGGAAT CTTTTATCGA  TTTATAATTA ATTTATTCAT TCTAATATAC TTTTAAAATT TCAAAAATTA GTATTTCTAG TTTTATAAAT TTTAAATTTA TGTGATTTAT TATACAATGA TTAAGTCACG TCAGTGACTC  CGACATAACT CTACATTCTA GATAGGTTGG GATCAGCGAG GGAAAATAGG CAAGGGGAGG CCAAGACATA AAATCTATAA GATCAAACCA ATTATAGGTT TACCTGAACC AATTTGACTT  TTCTCTCTCA CTCTCCCTCT CACTCCCTCT CCCTCTCCCC CTGGCAACAT TGACATGGAC AGAACCCCAG TGGCTACTAG TTAGTCTTCC ATGGCCAACC CGCCTGCCAA ACCCAAATTT  ATGATGCGAC CTGAACTCCA CACACCAGGC TAGGTGGAAG CTCCTTACAT GGCATCACCT ATCTCACCTA CAAATATTCC ACTCCCAATA TTGCAAAGCA CTCCTCAAAT CTCCGAAAAA  CCTCATGCGA ATAATGTTAA CATTTAACAG GCTTCATAAC ACCGCATCCA GTTTGACCCA AGTTTCTTGG ATGTTACTGA AAAGGGAAAC CTGCTCCGAA ACTACACAGT GATATCGGCT  AAATGAACCC CGCCAGGAGA GGATCTCTTT CTCTCTCTCT TTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCCACCC ATCATTCTTC CTCGACCCTT GTCATGGTTG  GAAGTTCATT TCTCTCATAG CCCAGCCGGG TGGGACTCGC AAGCACCAGA TTGCCCAAGG ATGCTCCCTG CCCGTGGAAG CGATAGCTCC GGGCGATATT CCACGGGCAG TGCCGGCGGC  CGCGGCGAAG GGCGGTGCAC GCCGGCGGCT ACCCGTAGGT GCCGTCAACT AAGGAGGCCG AATCATAGCA CCGATGGTGG GGGGGAAGTG GCCTTCCCCC ACGCGCAGCG ACCGTCGCTA  CAGGTGGAAA CGGGCAAGCT TTTCAACCCT CCACCACCGG TGGTTGTCCG TCGGCGGCGC ATGACTCGGA CAAGCATGAA TCGAAAACGA ACAACGCACC CGTGACCCTC AGCAAGTTCC  TTGCATCGTC TATCATATTT TTTATTGACG CGGACCCTCT GAGCGAGGGT CCGGAGATCC TCTCACATGG CCGCCATCAA TGATGGTCTT CTACCTAGTT CGGATCGGCC CGTCCTTCTC  TTGCTTCTCC TGACAAGAGC ATCATAAAAA ATCATCACGG AGCAAAGTTT GGATCTTGGC CCCGTCGGAA AAGCTAGATT GGGTTTGACT TTTTTTTCTA GCCAATCTCG TTTGCTACCA  GGTTCACACT TTCTGTGCCA AGCTGCTCAA ATAACCGCAG TCGAGTCGCA GATTTTGTCA CCCAGCGAAC ACCTGAGGAA GATGCATGCG GCCATCACTG CAGTGGGACT TTGACGGCGG  AATAGCCTGG CGGCGCGGAC GTGGTGCCGG ATGAGGCGGC GGCGAATCGT CGGGACCCCC CCATTCCGCA TCCCGACCCC GTATAATAAT AGTAAATGGG AATTTTTAGC TCCTTGTAGT  CATTGCAGCG GTGGTTGATG CGTTGCTTTC AACGCCCCCC TAAATCATGA TTCCTCTCAT CCACTAAAAA ATTTCCGCAA CGTTATCTTC GTCTGAACTC GTAGCTTCGG CCCCTGCTTT  CAGCTCGAGA TGGATCTCTA TAAAGAGTGG ATACCAGATG GCCATGGTCA TCCATCACCC GGATCTCGAG AGGCACAGCC ATGGAGCGGG GTTCTGGTCT GACTTCTCTC CTCCTGCTCC  TCCTGCTGCT CTCCTCCTCC TATGGTAAAG TTCGGCCTCT CTTCTTCTTC CCTCCCTCCA TTGCCACGAC CATGAGGCTC CAGTCCCTGC GGCAAGTAGC AACGAGAAAG GTTCTGTGGA  CTCAGATCGA AGAAAGTAGT TCGAGTTTGG GTAAAACTTA GGGGCTTGAC GATCAATGAC GAGCTTGACT GGATCACCAT CTTGAGAATC GAAGAATGCG GTCGCAGTCT GGTAATCTTT  CTGCTTCGAT GGATCTCTTC TAATGGGACT GATTCATTTG AAGGCAACGC GGAGCTCAGC CGGAGCTACT ACGCCCAGAG CTGCCCCAGG GCGGAGGAGA TCGTCAAGGA ACAGGTGAAG  CTGCTGTACG AGAAGCACGG CAACACCGCC GTCTCGTGGC TCAGGAACCT CTTTCATGAC TGCATGGTCG GGGTAAGCCC GTTGGAGCTC GGCTCCTCGT CTCTTGTGCG TGTGAGAACG  CTGGTTCGCG GTAAGTAGCT AACGGAGCGT GTCTTTGGGA GCGACGCAGG GATGCGATGC GTCGATTCTG CTGGTGGCCG CCGGCGGCGC CATGTCGGAG CAGACTTCGC AGAGGAGCTT  CGGCATGAGG AACTTCAAGT ACGTGGCCAC GATTAAGGAC GCCCTCGAGC GTGAGTGCCC CAAGACGGTC TCCTGCGCCG ACATCGTCGC CCTCTCCGCC CGAGACGGCG TCGCCCTGGT  GAGCCACCGG CGGTCCCTCT GGCGAGCCAG TGCCCGCTTA CCCACTTACG TTTGCTCCAC ACACGCGCGC AGCTGGGAGG GCCGTACGTC CCCATGAAGA TGGGGAGGAA GGACAGCAGG  GTGAGCCGCC TAGAAGCAGT GGAGGACTCC ATCCCCAACC ACGATTCCGA CATCTCCCTG GTGCTCTCCC GCTTCCAGTC CATCGGCATT GGCGCAGAAG GCACCGTAGC GCTGCTGGGT  ACCTGACTAT CTCCTTCCTA CTCGTGCGCG AAGTTGCAGA ACTTGATGCC GCAGTCTCTG CAGGAGCTCA TTCGGTGGGC CGCGTCCACT GCGTCAACCT GGTGCACCGG CTCTACCCCG  CCGTTGACCC CACATTGGAC CCCGACTACG CGGCGTACCT GAAAGGGCGG TGTCCGTCGC CGGAGCCGGA CCCAGCGGCG GTGGCCTACG GCCGGAATGA TCGGGAGACG CCGATGACGA  TCGACAACAT GTACTACAAG CACCTGCTGC AGCATAAGGG GCTCCTGCGG GTGGATCAGC AGCTGGCCTC CGACCCTTCC ACCGCCCCCT TCGTGGCAAA GATGGCCGCG GACAACGGGT 
ACTTCTACGA GCGCTTCGCG GAGGCCCTCC TCCTGCTGTC GGAGACCAAC CCGCTGCCCA GCGACCAGGG GGAGGTCAGG AAGGACTGCC GCTTCGTCAA CTCCGTATAG 

Retrieve as FASTA  
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAGCGGGGTTCTGGTCTGACTTCTCTCCTCCTGCTCCTCCTGCTGCTCTCCTCCTCCTATGTGGTAAAGTTCGGCCTCTCTTCTTCTTCCCTCCCTCCATTGCCACGACCATGAGGC
TCCAGTCCCTGCGGCAAGTAGCAACGAGAAAGGTTCTGTGGACTCAGATCGAAGAAAGTAGTTCGAGTTTGGGTAAAACTTAGGGGCTTGACGATCAATGACGAGCTTGACTGGATCACC
ATCTTGAGAATCGAAGAATGCGGTCGCAGTCTGGTAATCTTTCTGCTTCGATGGATCTCTTCTAATGGGACTGATTCATTTGAAGGCAACGCGGAGCTCAGCCGGAGCTACTACGCCCAG
AGCTGCCCCAGGGCGGAGGAGATCGTCAAGGAACAGGTGAAGCTGCTGTACGAGAAGCACGGCAACACCGCCGTCTCGTGGCTCAGGAACCTCTTTCATGACTGCATGGTCGGGGGGTAA
GCCCGTTGGAGCTCGGCTCCTCGTCTCTTGTGCGTGTGAGAACGCTGGTTCGCGGTAAGTAGCTAACGGAGCGTGTCTTTGGGAGCGACGCAGGGATGCGATGCGTCGATTCTGCTGGTG
GCCGCCGGCGGCGCCATGTCGGAGCAGACTTCGCAGAGGAGCTTCGGCATGAGGAACTTCAAGTACGTGGCCACGATTAAGGACGCCCTCGAGCGTGAGTGCCCCAAGACGGTCTCCTGC
GCCGACATCGTCGCCCTCTCCGCCCGAGACGGCGTCGCCCTGTGGTGAGCCACCGGCGGTCCCTCTGGCGAGCCAGTGCCCGCTTACCCACTTACGTTTGCTCCACACACGCGCGCAGCT
GGGAGGGCCGTACGTCCCCATGAAGATGGGGAGGAAGGACAGCAGGGTGAGCCGCCTAGAAGCAGTGGAGGACTCCATCCCCAACCACGATTCCGACATCTCCCTGGTGCTCTCCCGCTT
CCAGTCCATCGGCATTGGCGCAGAAGGCACCGTAGCGCTGCTGGGGGTACCTGACTATCTCCTTCCTACTCGTGCGCGAAGTTGCAGAACTTGATGCCGCAGTCTCTGCAGGAGCTCATT
CGGTGGGCCGCGTCCACTGCGTCAACCTGGTGCACCGGCTCTACCCCGCCGTTGACCCCACATTGGACCCCGACTACGCGGCGTACCTGAAAGGGCGGTGTCCGTCGCCGGAGCCGGACC
CAGCGGCGGTGGCCTACGGCCGGAATGATCGGGAGACGCCGATGACGATCGACAACATGTACTACAAGCACCTGCTGCAGCATAAGGGGCTCCTGCGGGTGGATCAGCAGCTGGCCTCCG
ACCCTTCCACCGCCCCCTTCGTGGCAAAGATGGCCGCGGACAACGGGTACTTCTACGAGCGCTTCGCGGAGGCCCTCCTCCTGCTGTCGGAGACCAACCCGCTGCCCAGCGACCAGGGGG
AGGTCAGGAAGGACTGCCGCTTCGTCAACTCCGTATAG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAGCGGGGTTCTGGTCTGACTTCTCTCCTCCTGCTCCTCCTGCTGCTCTCCTCCTCCTATGGCAACGCGGAGCTCAGCCGGAGCTACTACGCCCAGAGCTGCCCCAGGGCGGAGGAG
ATCGTCAAGGAACAGGTGAAGCTGCTGTACGAGAAGCACGGCAACACCGCCGTCTCGTGGCTCAGGAACCTCTTTCATGACTGCATGGTCGGGGGATGCGATGCGTCGATTCTGCTGGTG
GCCGCCGGCGGCGCCATGTCGGAGCAGACTTCGCAGAGGAGCTTCGGCATGAGGAACTTCAAGTACGTGGCCACGATTAAGGACGCCCTCGAGCGTGAGTGCCCCAAGACGGTCTCCTGC
GCCGACATCGTCGCCCTCTCCGCCCGAGACGGCGTCGCCCTGCTGGGAGGGCCGTACGTCCCCATGAAGATGGGGAGGAAGGACAGCAGGGTGAGCCGCCTAGAAGCAGTGGAGGACTCC
ATCCCCAACCACGATTCCGACATCTCCCTGGTGCTCTCCCGCTTCCAGTCCATCGGCATTGGCGCAGAAGGCACCGTAGCGCTGCTGGGAGCTCATTCGGTGGGCCGCGTCCACTGCGTC
AACCTGGTGCACCGGCTCTACCCCGCCGTTGACCCCACATTGGACCCCGACTACGCGGCGTACCTGAAAGGGCGGTGTCCGTCGCCGGAGCCGGACCCAGCGGCGGTGGCCTACGGCCGG
AATGATCGGGAGACGCCGATGACGATCGACAACATGTACTACAAGCACCTGCTGCAGCATAAGGGGCTCCTGCGGGTGGATCAGCAGCTGGCCTCCGACCCTTCCACCGCCCCCTTCGTG
GCAAAGATGGCCGCGGACAACGGGTACTTCTACGAGCGCTTCGCGGAGGCCCTCCTCCTGCTGTCGGAGACCAACCCGCTGCCCAGCGACCAGGGGGAGGTCAGGAAGGACTGCCGCTTC
GTCAACTCCGTATAG

Retrieve as FASTA