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Entry information : Spol1CysPrx02 (Spipo3G0073100)
Entry ID 13251
Creation 2015-06-19 (Christophe Dunand)
Last sequence changes 2015-06-19 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2015-06-19 (Christophe Dunand)
Peroxidase information: Spol1CysPrx02 (Spipo3G0073100)
Name (synonym) Spol1CysPrx02 (Spipo3G0073100)
Class 1-Cysteine peroxiredoxin     [Orthogroup: 1CysPrx001]*
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Araceae Spirodela
Organism Spirodela polyrhiza (great duckweed)    [TaxId: 29656 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value Spol1CysPrx02
start..stop		 S start..stop
Vv1CysPrx 253 5.02e-87 1..167 9..175
Cs1CysPrx 248 8.4e-85 1..167 9..175
Lu1CysPrx93 247 1.38e-84 1..167 9..175
Lu1CysPrx219 247 1.39e-84 1..164 9..172
Literature and cross-references Spol1CysPrx02 (Spipo3G0073100)
Protein sequence: Spol1CysPrx02 (Spipo3G0073100)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   181
PWM (Da):   %s   20040.49  
PI (pH):   %s   6.39
Sequence
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TIPNLEVDTT HGRVKLHDFV GDSWAVIFSH PGDFTPVCTT ELGRMALQVG EFEKRGVKLL GVSCEDVKSH LLWIKDIEHF TPGCKVTYPI VADPDREVIR ELNMVDPDKV DEEGFEIPNR 
ALHVISPDKK IQLSIVYPAT TGRNMDEVLR VVDLLQAAAV HRKAKAAPPP PLFARAAASK L* 

Retrieve as FASTA  
Remarks Partial sequence from genomic. 5'end is missing.
DNA ►
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CACGATCCCC AACCTGGAGG TGGACACCAC CCACGGCAGG GTGAAGCTCC ACGACTTCGT CGGCGACAGC TGGGCCGTTA TCTTCTCTCA CCCAGGTACC TATCCCTCCC TCTCTCTCTC  TCTCTCTCCG TCTTCCCTCT CTATCCTCTC TCCTTGCCGG CCGTCTATTT CTCCGTCTGA CGGTGGGGAC GGCGGCGCCG CCGCCGGCGC CGGAGCAGGG GACTTCACGC CGGTGTGCAC  GACGGAGCTG GGGAGGATGG CGCTTCAGGT GGGAGAGTTC GAGAAGAGGG GGGTGAAGCT TCTGGGGGTC TCCTGCGAAG ACGTCAAGTC CCACCTTCTC TGGATCAAGG ACATCGAGCA  CTTCACGGTC AGTTGCCCCC CTCCCCCAAA TTAATCCCAT ACCCAGATTT ATTTTTATTT TTATTTGCAG ACAAGTAATG ATGATTTTTT TTTCTTAATT TTCGCCTTTT TTGGATTTTT  TAATGTGAAG CCGGGGTGCA AGGTGACATA CCCGATAGTG GCGGATCCGG ACCGCGAGGT GATCCGGGAG CTGAACATGG TGGATCCGGA CAAGGTGGAC GAGGAGGGCT TCGAGATCCC  CAACCGGGCC CTCCACGTCA TCTCCCCCGA CAAGAAGATC CAGCTCAGCA TTGTCTACCC GGCGACCACC GGCCGGAACA TGGACGAGGT GCTGCGGGTG GTGGACCTCC TCCAGGCCGC 
CGCCGTCCAC CGCAAGGCCA AGGCGGCACC GCCACCGCCG CTGTTTGCCA GGGCGGCGGC GAGCAAGCTG TGA 

Retrieve as FASTA  
CDS►
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CACGATCCCC AACCTGGAGG TGGACACCAC CCACGGCAGG GTGAAGCTCC ACGACTTCGT CGGCGACAGC TGGGCCGTTA TCTTCTCTCA CCCAGGGGAC TTCACGCCGG TGTGCACGAC  GGAGCTGGGG AGGATGGCGC TTCAGGTGGG AGAGTTCGAG AAGAGGGGGG TGAAGCTTCT GGGGGTCTCC TGCGAAGACG TCAAGTCCCA CCTTCTCTGG ATCAAGGACA TCGAGCACTT  CACGCCGGGG TGCAAGGTGA CATACCCGAT AGTGGCGGAT CCGGACCGCG AGGTGATCCG GGAGCTGAAC ATGGTGGATC CGGACAAGGT GGACGAGGAG GGCTTCGAGA TCCCCAACCG  GGCCCTCCAC GTCATCTCCC CCGACAAGAA GATCCAGCTC AGCATTGTCT ACCCGGCGAC CACCGGCCGG AACATGGACG AGGTGCTGCG GGTGGTGGAC CTCCTCCAGG CCGCCGCCGT 
CCACCGCAAG GCCAAGGCGG CACCGCCACC GCCGCTGTTT GCCAGGGCGG CGGCGAGCAA GCTGTGA 

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CACGATCCCC AACCTGGAGG TGGACACCAC CCACGGCAGG GTGAAGCTCC ACGACTTCGT CGGCGACAGC TGGGCCGTTA TCTTCTCTCA CCCAGGGGAC TTCACGCCGG TGTGCACGAC  GGAGCTGGGG AGGATGGCGC TTCAGGTGGG AGAGTTCGAG AAGAGGGGGG TGAAGCTTCT GGGGGTCTCC TGCGAAGACG TCAAGTCCCA CCTTCTCTGG ATCAAGGACA TCGAGCACTT  CACGCCGGGG TGCAAGGTGA CATACCCGAT AGTGGCGGAT CCGGACCGCG AGGTGATCCG GGAGCTGAAC ATGGTGGATC CGGACAAGGT GGACGAGGAG GGCTTCGAGA TCCCCAACCG  GGCCCTCCAC GTCATCTCCC CCGACAAGAA GATCCAGCTC AGCATTGTCT ACCCGGCGAC CACCGGCCGG AACATGGACG AGGTGCTGCG GGTGGTGGAC CTCCTCCAGG CCGCCGCCGT 
CCACCGCAAG GCCAAGGCGG CACCGCCACC GCCGCTGTTT GCCAGGGCGG CGGCGAGCAA GCTGTGA 

Retrieve as FASTA