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Entry information : SpolGPx03 ( Spipo6G0008900)
Entry ID 13257
Creation 2015-06-19 (Christophe Dunand)
Last sequence changes 2015-06-19 (Christophe Dunand)
Sequence status complete
Reviewer Catherine Mathe
Last annotation changes 2016-03-07 (Catherine Mathe)
Peroxidase information: SpolGPx03 ( Spipo6G0008900)
Name (synonym) SpolGPx03 ( Spipo6G0008900)
Class Animal glutathione peroxidase    [Orthogroup: Gpx1002]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Araceae Spirodela
Organism Spirodela polyrhiza (great duckweed)    [TaxId: 29656 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SpolGPx03
start..stop		 S start..stop
AoGPx02 275 1.82e-96 1..174 1..171
ZmGPx02 270 3.24e-94 1..173 1..170
VvGPx05 269 3.95e-94 1..173 1..169
NtGPx05-1A 267 3.99e-93 1..174 1..170
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '13257' 'complement(join(712247..712279,712431..712598,714616..714734,715430..715491,715687..715763,716285..716350))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 716285..716350 64 N° 2 715687..715763 75 N° 3 715430..715491 60 N° 4 714616..714734 117
N° 5 712431..712598 166 N° 6 712247..712279 31  
complement(join(712247..712279,712431..712598,714616..714734,715430..715491,7156 87..715763,716285..716350))


exon

Literature and cross-references SpolGPx03 ( Spipo6G0008900)
DNA ref. Phytozome 12:   pseudo6 (716350..712247)
Cluster/Prediction ref. Phytozome Gene 12:   31506028
Protein sequence: SpolGPx03 ( Spipo6G0008900)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   174
PWM (Da):   %s   19427.01  
PI (pH):   %s   9.83
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MGASQSSRAATKGNSIHEFSVKDNHGNEVSLGRYKGKVLLVVNVASKCGLTNTNYTQLTELYNKYKSKDFEILAFPCNQFLNQEPGTSQQAESFACERFKAEYPIFQKVRVNGPETAPVY
KFLKASKTGLMGSRIKWNFTKFLVDKDGVVIRRYGPGTEPLSIEKDIQKALGEI*

Retrieve as FASTA  
Remarks Complete sequence from genomic.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGAGCGTCTCAGTCTTCCAGGGCAGCAACCAAGGGGAACTCCATCCATGAGTTCTCTGTCAAGGTAGGGCACGAGAAGTGCTTCTTCTTCTCCGTGTACTTGTTTTCCGTTTACTTT
TCTAGATCCGATCGTTCCAGGAGCAGGGTCGGAAACGTTTAAGTTGAAGTTTTGATCAGGGAAGTGAGAGCGAGAATCCAAAACACCAGGTGATGTTGCGGAGGGCTTGCCTTGCTTTCG
CTGATTTTCCCGAAGGAGTGGATGATGATGTGGTGTTGTTGTTGAGGAAGGGGTTGGAGGGGACGAGAGGAATGGTCTTGATCTCTTTCTTGTATATTTTTCTCTGTCGAAGATGGCAGG
GGGGGTCTTACACAAATATGGTCTAATTTCCATGGCAAGAATGGAGGGCAAAGAAAGAAAATAAGAAAGAAAGAAGGAAAGAATTTGTTTCATCTTGCACCGAAAGATACGGACGGTCTG
TTCTTGAAAATTTCCTATTAGCCCTATCGTGAGTGCCCTTTTTTAATACATCTTGTGACTCACGAAGTCTTTTTTGTTACTTATTGCCGCAAACTGCCAATCATCAGGAGATAACCATGG
AAATGAGGTCAGTCTCGGGAGGTACAAAGGGAAGGTTCTCCTCGTCGTCAATGTTGCATCCAAATGGTACAAATCAGTCATGCCTTTGATTGTCTTGAATTCTTCTCTTTAAACCTGTCT
TCTCTCCTTTTGAATTAATAATGTGACCTATTTTCTGTTTTTTTTTCTGATAGAGAGAAAACTGAAAAAATTACTTTTCCTCTGAAAGATGGTTTTTTTATTCTTCTTTCTTCTCTGCTT
TTTTTTTTGATGAACAAACAGCGCGGGCTTACAAACACCAACTACACCCAGTTGACAGAGCTTTATAACAAGTACAAGAGCAAAGGTTAGCTATGCCGATTTGCCTCTCTTTCTCTCCCT
CCTTGCTCTCCCCTCTTCATTCTTGGATTTTTATTTCTTTCAATTACTTGACAAATGACTTATCTTTATGCAACGTGCGTTGGCGTCACTAGAGTAAAATGTGCGTCGATTTTTGTTTGA
AAAGACTCCTGTTCTACTTACGTTTCTTGAAGATTCTTGTGGAGAATGAATTATAGACATGATGGGTTTCTTCCCCATATTTTTGGATGGCTAAATCATTCAGCAGTTTATTCAGCTTCT
TCTTCAGACTAATATCTATCTTAATTTTTATGAAGATAAGTAATTATGTGCTGACATTTTCCATTTCAGAGATTGTGTTTTCTTCATTATAGAAGTTATTTATTGGTTTTCTCCAGAAGA
TAATCTATCCCTTGAAATATTTTCTATGAAAACAGATCAAATTTTACTTCTAAAATTGAACATTTTTACTTTTGAGTTTTTTGTCCTAATCTCTCACTCAATGTGGAGTACGTCGTTATT
CTCTTATATGTCTAACTTATGCCGCATGCAAAAAGTAGGATTTTACCAATCCTGTTTTCCCAAACGATTCCACACTGCTTGGGATTTAGTAATTTTTTTTTATTTTTAGCAAGGCATAAT
TTTGATGTACTCTTCTTTTCTTTTATCTTGATTTATTTTATCTCGTTGGGTGTGCAACAGACACTTCGAAATTTTGGCCTTCCCATGTAACCAATTCCTGAATCAAGAACCTGGAACAAG
CCAACAGGCAGAAAGTTTTGCATGTGAGAGATTCAAAGCTGAGTATCCTATATTTCAAAAGGTAAAGTTACTCCCCAGTTTCTTTCCCTTGTTTGATGGTGGTTGAAATGTATAACAACT
TAGAACGACCTCATCAAAAGATTATTAAAGAAGAAATGTGATAATAGCGCGCATAATAGTATTTGCCTCTAGCATCCTCAAAATTCATTGCTTCCTTTGGTTTAGATGATGATATGCTGT
TCTGTTAATCAGTTTTCCAGACTATTAAGCACATTCTGCTTATGAAGTCCAACAACACAATGATCACATGAAGGCTTCCCTCTTATTTGATAATTTTATTCTGAATCTGTAGAACATTGT
GATGCGTCAATGTTCTGATTATTCTGCTTTGTGGATTGCAAGAAACGAAAACCGAAAAGTATATTTTGGATTTTTTTTTAAGCTCTTCCAGATGGAAACCCTACCTACTGTATTCTTATA
TTCCTAGACTTGTTTGCCCCTTTGTTTCAGCCACTTTCCCTTTAATCGCATTTGCAAAAGATTGAACATGTTGACATGTGCGAACATGAGACTGCAGTAAAACATTCATTTTAGGTATGT
CATTAATTTGAGCGGTTTCGTAATTTTAATAGTTCTGGCAATAAAATATTTTCCCTTCCTGCCATCTACTCTCCTGGGACTTCTAAGTGGACATTCTCTTATTGAAAGGTACCTAGGTTT
TGCATGAGAAAATTTTTGCTGGACAGAGAATTCTCCAAACAGTATTTCATAGGTTTTTGTTGCTTAGGAAGGCCTCATTTTTTAGAGTTGACCGTAGCACTGGGTCAAGCATTTGTTTAT
ACCTGCATGAAACCCACTTAGTGATATATAATGAATTCATGAAAACCTCAATGATATATGTCGTTTCGTGCTGTGAATTTGGAGTTTAACAGGCCCCAAATTCCTGAATTTGCAGTTTTT
TTTATATGTGCATGAAACCCACCTAGCTAATTCGCTGTTTCTTTCACTTTGACAGTCTTTTGGCATTAAGCCACTGATAGATATCTTGCTTCATCCCTCTTAATCATTGATATCTTCATT
ACTGCCATCGAGGGTTATCCTTTTCTTACTGCTTGAATAATTTGATATTTTTATCCTTTTCTGTATCTTTTTATGTCGTGAAATATATCCTTTGTCGATTGAAGTGGTTGGAAACAAAAT
ATTTCTATTTTAAATAAAATTATTTAAGCTCTCTTCTTTTGGGGTCAAAATGGTGACAAGAAAAGATCATGGTTTTAATTGTTCTGAAGGCAGAAATGATTACTTTGTAACATGTTGTAC
AATATAGCACGTGCACATCACCACTGCCAACTAGTGAACGAATAACGTAAAAATGACTGGAGGAGGAATATCATTGCACAATAAATGAAAAATATTTCCATGCGAGGCAGTGCGACCAGT
TGATGCTTCCTGCTCACCGCATCTGCCCTTCTTTTTTCTTCCTTTGTATATTTATTTGAAACAATCAAACAAACATAGTGAATTAGACACCGCGGCCAGAAGATAACATGAGAATTCTTC
TTCAGCTATTGATTAGCTCCCAAATTACTGTTATATTTGATTTTATTAGCCCTTCTTCGGTTCAAAAATACAAAATCAAACTTCAAAAAATGATTCCGTGGCCGTTTCCCTGTGTACAAT
AAACTCCCTATTTGTCATGTGTGTATAGACAGAAACAAAGAAATGATGGGGAGGGATGGGGGGACGGGAAAGGTGAAGAAGCATAGAGTGGACAGTTTATCTAATTCATCTATTGTAGCA
TCTGGATTGCTACCTTTCTTGCACTTTATCCTTTGGTAACCCTTGAATAATCTTCTATTTTCTGCTTCACTCCATATGCATATGCAACAGAAAAAATTGTCTCACTCCCAAAGTTGTCTA
GTTGTCTGCATTTATTATTATATCTGAACTAAAAAGTTCTCTCATATATCGTGTTCATCTGCGGTGTCTATTTTTGCAATGCAACCGTATCAGATTTTGGGCAGGCTTTTCCACAAGGAT
GAGAACAAGAACTCTAGCTAGTTTTCCCTCTTTTACAGGTGTTCGAGTGAATGGTCCGGAAACAGCCCCGGTCTACAAATTTCTCAAAGCAAGCAAGACTGGCCTCATGGGATCTCGGAT
TAAGTGGAACTTCACCAAGTTCCTGGTTGACAAGGACGGCGTTGTCATCCGTCGTTATGGTCCAGGGACTGAACCCTTGTCCATAGAGGTCAGAAGAAACACACCCTATTATAATTCTTA
TGTATGGGTGAACTACCTAAACATTGGAGACGTCTGATTATTTAAAGTTATTTATTTCATTCTCTGAGTTGTTGTGGTTCTCTATCGCTCCATTAATGACCTTTTATTGTGAACTTCAGA
AAAAGACATCCAGAAGGCCCTGGGGGAGATCTAG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGAGCGTCTCAGTCTTCCAGGGCAGCAACCAAGGGGAACTCCATCCATGAGTTCTCTGTCAAGGATAACCATGGAAATGAGGTCAGTCTCGGGAGGTACAAAGGGAAGGTTCTCCTC
GTCGTCAATGTTGCATCCAAATGCGGGCTTACAAACACCAACTACACCCAGTTGACAGAGCTTTATAACAAGTACAAGAGCAAAGACTTCGAAATTTTGGCCTTCCCATGTAACCAATTC
CTGAATCAAGAACCTGGAACAAGCCAACAGGCAGAAAGTTTTGCATGTGAGAGATTCAAAGCTGAGTATCCTATATTTCAAAAGGTTCGAGTGAATGGTCCGGAAACAGCCCCGGTCTAC
AAATTTCTCAAAGCAAGCAAGACTGGCCTCATGGGATCTCGGATTAAGTGGAACTTCACCAAGTTCCTGGTTGACAAGGACGGCGTTGTCATCCGTCGTTATGGTCCAGGGACTGAACCC
TTGTCCATAGAGAAAGACATCCAGAAGGCCCTGGGGGAGATCTAG

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGAGCGT CTCAGTCTTC CAGGGCAGCA ACCAAGGGGA ACTCCATCCA TGAGTTCTCT GTCAAGGATA ACCATGGAAA TGAGGTCAGT CTCGGGAGGT ACAAAGGGAA GGTTCTCCTC  GTCGTCAATG TTGCATCCAA ATGCGGGCTT ACAAACACCA ACTACACCCA GTTGACAGAG CTTTATAACA AGTACAAGAG CAAAGACTTC GAAATTTTGG CCTTCCCATG TAACCAATTC  CTGAATCAAG AACCTGGAAC AAGCCAACAG GCAGAAAGTT TTGCATGTGA GAGATTCAAA GCTGAGTATC CTATATTTCA AAAGGTTCGA GTGAATGGTC CGGAAACAGC CCCGGTCTAC  AAATTTCTCA AAGCAAGCAA GACTGGCCTC ATGGGATCTC GGATTAAGTG GAACTTCACC AAGTTCCTGG TTGACAAGGA CGGCGTTGTC ATCCGTCGTT ATGGTCCAGG GACTGAACCC 
TTGTCCATAG AGAAAGACAT CCAGAAGGCC CTGGGGGAGA TCTAG 

Retrieve as FASTA