Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
188 |
| PWM (Da): |
20340.26 |
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| PI (pH): |
9.42 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
SQGPWWPVLK GRKDGRVSKA NETINLPSPF SNATKLVKSF AKRGLNVKDL VTLSGGHTLG FSHCSSFSAR IHNSTDPTIN SEFAMNLKKK CPLQNKDGNA GEFLDSTSSK FDNDYYKRIT
MGEGVFGSxG SDQALYGDDR TKGIVDSYAK DEKLFFKEFA ASMVKLGNVG VIEDGEIRVK CNVVNLTK
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Retrieve as FASTA
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| Remarks |
Contains a retroelement pol polyprotein domain between the two CIII domain. Exons 1 and are missing |
DNA ►
Send to BLAST
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGTTCCTCT ATCTCTATTT TCTCAAGTCT CAAGGTCCAT GGTGGCCGGT GCTTAAAGGA AGGAAAGACG GGAGAGTGTC GAAAGCTAAT GAAACTATAA ACCTCCCATC TCCATTTTCC
AATGCCACAA AACTTGTTAA AAGTTTTGCT AAAAGAGGAT TAAATGTCAA AGATTTGGTC ACACTTTCAG GTGGACACAC ATTAGGGTTT TCACACTGTT CTTCATTTAG CGCTCGCATA
CACAACTCAA CCGATCCTAC GATTAATAGT GAGTTTGCTA TGAACCTGAA AAAGAAATGT CCTCTACAAA ACAAAGATGG CAATGCAGGA GAGTTTTTAG ATTCCACTTC TTCAAAGTTT
GATAATGATT ATTATAAAAG AATTACTATG GGTGAGGGCG TGTTTGGGTC TATGCTGGAT TCATGGAGCT ATAGTTGGGG TCTAATATTG ACCACTATAA TTTGGGGATT TCACAGACTG
TCCATAATCT TCTCCCTATC AATCAGTGTA TTAAGTTTCC TTGTATAGGC TCCTAGGTTC TCTATATATT GTGTGTAATT GACTCTTTGT GATATCAGTT GAATCAATAG AAAACATAAT
AAAAATCCTC TGATTACCAG TTGAATATGG TATCAGAGCA CGTGTGATTC TGGGAATTCT GAGCATCCTC ACTAGAGATG GGTGACAATG AAGCTGTGGT CAGTCAAATC CCTGATGAAT
TAACAATGCA GATTGCTGCC CTTCTGAGAA ATGGTCTCGG AACACAGCAA CAAACAACTA ACCCCGAGAA TTTATCCTTG GGGATTAAAC TCGGTGGTGA CAACTATGCC CTATGGGCAA
CCCTGATGAA GAAAGCTATT GGGGGAAGGG GGAGAGGTTC TCACATTACA GGGGAGCCAA CACCTCCATC CAAAACTGAC AAAACTTATA CAAGGTGGGA ACAAGATGAT GAATGTGTTT
TCACATGGAT TATCCAGAAT CTTGAATCCA ATTTGGTGAA TAATGTCTCG CAATATCCCA CTGCAAAAGC CCTCTAGGAT GGGTTAGCCA CCACATATGG TTCTGGAACA GATTCGTTAC
AGGTGTTTGA CCTTCATAAG AGGGCTAATT CATTAAGGCA AGGGTCCGAT ACACTAGAAG ACTTGTGGAA CAAACTGCAG AACATCTGGA TGTCTATAGA TAGGCGAGAT CCGAACCCTA
TGAAGGACCC AGAAGACATT CAGATCTACA ATAAGAAGAC TCAAGAACAA AGACTCTATC AATTGCTAAT GGCGGTTGAT GACAAGCTGG AACCTGTCAA GAGAGATATC CTAAAAAAGG
ATCCTCTTCC TTCCGTGGAA ACAGCATATG CTACAATTCG AAGGGAAGTA GCCTGGCTTA ATATACTAAA ATCAGGCCCT TCTGATAGTG ACTTGACTGA AATTGGAATG GGTTTGGCTG
CTAAAGATTC TGCACAGAGG TTTAAATTCC GATCCAAAGA GAAAGAAGAT AAATCCAAGT TGTATTGCAC TCACTGCAGG ATGAAGAAAC ACACTAAAGA GACATGTTTC AAGCTGGTTG
GCTATCCTGA ATGGTGGGAG GATGGTCATA AGGAGAAAAA TAAACAGCGT TCCAGATCTG ATGTCAAAGG GGCCTCGTCT GCAAGTGAAG ATCCGTCTGA AAAAGGGAAA GGAAGTGGCA
CTAGTTTTGG TGGAATGGCG GCGGACTCCT ATGAAAAACT TGGAGGTAAA GGGTTTGAGA GTTACACCTC AAACCCCTCT CTTATTAATT TCAAGTTTTT TCCCCCAGAT GCTTCTTTCT
TTGACAGGCT TGACCAAGAA TGTTTAAATG AAACTTATGA AAAGCCCAAA GCTTGCCATG TTCACCCCCA ATCTAGGAAA TCAATGAACT GGATCTTTGA TTGCGGGGCT ACGGACACCA
TGTCCTATGA TCCTAAAGAC TTTGGTGACA TGTCATCTCC AAAGAAGTCC CATATTGAGA CTGCTAGTGG AGAAATTGTT GAAGTCAAAG GGGGAGGGTC AATTACTTTT TCAGAAAAAA
TGGAAATTAA AAATTGTTTA TACATTCCTT CACTATCCTC AAAGTTATTA TCTGCCAGTC AAGTGACAAA ACAACTCAAT TGTGTGGTTC TTATGTATCC AACCTTTTGC ATTTTACAGG
ACATTCGTAC AAAGGAGATC ATTAGGCGTG GTACTGAACG AGGAGGCCTC TATTATGTTG ATGAGGTAGT TCATAAGGGA CATGCCATGC TTGCTCACGG AACAACCGAA AGGCAACTTT
GGTTATGGCA CCGGCGACTT GGTCATCCTT CTTTTAGCTA TCTTAAAATT TTGTTTCCTA GTCTTTTTTT GAATAATTCC ATTCATGAGA AATGTGAAAC CTGCATTCTT GCAAAAAATC
ATAGGGTCTC ATTTAATCAA AGTAATACTA GAGTTGATTC TGCTTTTTCG CTAATCCATT CGGATGTTTG GGGTCCAGCA CCAAATTCCA CTAACAATCA AATCAGGTAC TTTGTTTTAT
TTGTGGATGA TTTCTCCAGA ATGAAGAATT GGATATACTT CATGAAACAT AAATCAGAAG TGCCAGAAAT ATTTGTTTGT TTTTACAAAA TGATTTTGAC TCATTTTGGC AAAAAAAATA
CAGATTCTCC GTTCTGTTCT GATAACGGAA CAGAATTCGT CAACCAAACA ATGCAAATTT TTTTCAAAGC AAATGGTCTT ATCCATCAAA CCACTTGTCC AAACACCCCT CAACAAAACG
GCACCTCAGA ACGAAAAAAT CGTACTCTCC TTGAAAAAAC TCGTGCTATT ATGATTGAAT CTAGAGTCCC TCATTCTCTT TGGCCGGAAG CTCTTGCTAT CTTGCAAATC GTCTACCAAC
CCAAAGTCTA GGAAATAAAA CTCCATTACA AGTGCTTGCC ACCCAAGTTA AAATTCCATC TGTTATGACC TTACCACCTC GTGTCTTTGG TTGTTCGGTG TTTGTTCATA TCCCCAAGAC
TAGTCGAAAC AAACTTAATC CGTGTGCCGA AAAGTGTGTA TTCGTTGGGT ACGGTGTCCA TCAAATGGGA TATAGGTGCT ACAATCCGGT TACTCGTCGA ATCCATGTCA CCATGGATTG
TGACTTCTTA GAATCCGATT TTATGACCAC CAATCTCGTG CTCAGGGGGA GAAAGTAAGT GAATCACTCG ATTGGTTGCT ATATGAAAGT TGCTCTGAGG ATGTTCCAAC AGAGTCGGTA
GATGGCGCCA CCGAACACGC CTCTTCCAAC ACAAAAGAGA CTGACGAGGC AGTTTTTACC ACCAATGATT CTCCCGAAGA CGATGTCCAA CAAGAGATAA ATGTCATGGA TACTACGAGC
GAATCAGCCG AAGAAAATGT CCATCAAGAG GTAAACAATT CACAATGTCA TAATTCACAA AATGCTACTG ATCATGACAT TTCAGGAAGT TCATTTGTTG AAACTCAAAC CTTTGTTCTT
CCCCCAAGAA AAAATAGAGG GGTTCCTCCT GACCGGTATT CACCGGAACA TGTTCCTCGT GCTTCTACAT ATCCGGTAAA AACTGACAGG AAAGGAATGG CGAAGATTGC AAAGGCGTTT
TCAACTACTA TTCTCTCTGA ACAAATTCCT AAAACGGCTC AAGAAGCTAA GAAGATGACC GAATGGCATG AGGCAATGAA TACCGAAATG GAAGCTCTAA GAAGGAATGG CACATGGGAG
AGGTGTATGT TACCACAAGG GAAGAAACCA GTCGGGTGTA GATGGGTGTT TAATATAAAA TATAAATCTG ATGGCACCAT TGAGCGACAC AAGGCAAGAT TGGTTGCCAA AGGATATACA
CAAACATATG GTATTGACTA CTCTGAAACG TTCTCTCCGG TTGCAAAGAT TGACACTATC AGAGTTTTAT TTTCAATAGC CGTGAATAAA GATTGGCCTC TTCATCAATT TGATGTAAAG
AATGTGTTCT TACATGGAGA CTTGAAAGAA GAGGTGTATA TGGAGGCCCC AACAGGGTTC TCTGATGATT TTCAAGAAAA TGAGGTATGT AAACTAAAAA AGGCGTTATA TGGGCTCAAA
CAGTCTCCGC GTGCATGGTT TGGGAGATTT ACAATGGCAA TGAAGCAGTA TGGCTACAAA CAGAGTAATG GGGATCATAC CCTGTTTTAC AAAAGGAGAG GGGAATTGGT CACTTGTCTT
ATAATATACG TTGACGACAT GATTATAACG GGGAATGACG AAGAAGAAAT TAGCTCCCTT CGGAAAAACC TCTTCAAGGA ATTCGAAATG AAAGACCTTA GGGGATTGAA GTATTTCCAA
GGAATCGAGG TTCTTAGGTC AAGAGGAGGC ATTTATATTT CCCAACGGAA ATATATATTG GATTTATTAG TTGAAGTTGG CATGGTGGAT TGCAAACCAT ATGACACTCC CATGGTTGTG
AATCACAAAC TAAAGATAAT TGAAGGGGCC AAACCAGCAA GTAAAGAAAG GTACCAAAGG TTGGTGGGAA AATTGATTTA CCTGGCTCAC ACTCGACCCG ACATTGCATA CGCGGTGGGA
GTAGTTAGTC AATTCATGCA TCATCCTCAA GAACACCATA TGGAGGCAGT AATGAGGATT ATTCGATATC TCAAACGCAC ACTAGGAAGA GGCATATTGT TTAAGAAAAA TGGCCACCTT
GATGTTGAAG TATTCACAGA TGCTGATTGG GGAGGGAATC CTAATGACAA GCGATCAACT GCCGGCTACT TTACTCTTCT TGGAGGTAAC TTGGTGACTT GGAGGAGTAA GAAACAGAAA
GTAGTATCAC TGTCAAGTGC TGAATCAGAA TTTAGAGGGA TCGTTAAGGG GATTACCGAG ATACTTTGGC TAAAAAGATA ATGAAAGAAA TCGGATCCCC TCTGAAGTGT CCAACTCAGT
TAATGTGCGA TAATAAAGCT GCGATTAAGA TTTCAGAGAA CCCGGTACAG CACGATAGAA CAAAGCACGT TGAAATAGAT AGGCACTTCA TAAAAGAAAA AATTGAAGAT GGGACAGTCG
AACTTCCATT TGTTAGATCC GAAGACCAAC TGGCGTACAT CCTGACAAAA GCGATTGCTG CAAGAACATT CGAATCAGTT GTATCCAAGT TGGGTATTGG TGATCCCACT ACACAACTTG
AGGGGGAGTG TTAGAATATT CGACTAAATT TGGAATGCTG GATTCATGGA GCTATAGTTG GGGTCTAATA TTGACCACTA TAATTTGGGG ATTTCATAGA CTGTCCATAA TCTTCTCCCT
ATCAATCAGT GTATTAAGTT TCCTTGTATA GGCTCCTAGG TTCTCTATAT ATTGTGTGTA ATTGACTCTT TGTAATATCA GTTGAATCAA TAGAAAACAT AATAAAAATC CTCTGATTAC
CAGTTGAATA GGGTCGGACC AAGCACTGTA TGGAGATGAC AGGACTAAAG GGATTGTGGA TTCATATGCT AAAGATGAGA AACTGTTCTT CAAAGAATTC GCAGCTTCTA TGGTCAAACT
TGGAAATGTA GGTGTCATCG AAGATGGTGA AATTAGAGTG AAGTGTAACG TCGTGAATTT AACAAAATGA
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Retrieve as FASTA
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cDNA►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGTTCCTCT ATCTCTATTT TCTCAAGTCT CAAGGTCCAT GGTGGCCGGT GCTTAAAGGA AGGAAAGACG GGAGAGTGTC GAAAGCTAAT GAAACTATAA ACCTCCCATC TCCATTTTCC
AATGCCACAA AACTTGTTAA AAGTTTTGCT AAAAGAGGAT TAAATGTCAA AGATTTGGTC ACACTTTCAG GTGGACACAC ATTAGGGTTT TCACACTGTT CTTCATTTAG CGCTCGCATA
CACAACTCAA CCGATCCTAC GATTAATAGT GAGTTTGCTA TGAACCTGAA AAAGAAATGT CCTCTACAAA ACAAAGATGG CAATGCAGGA GAGTTTTTAG ATTCCACTTC TTCAAAGTTT
GATAATGATT ATTATAAAAG AATTACTATG GGTGAGGGCG TGTTTGGGTC TATGCTGGAT TCATGGAGCT ATAGTTGGGG TCTAATATTG ACCACTATAA TTTGGGGATT TCACAGACTG
TCCATAATCT TCTCCCTATC AATCAGTGTA TTAAGTTTCC TTATGGGTGA CAATGAAGCT GTGGTCAGTC AAATCCCTGA TGAATTAACA ATGCAGATTG CTGCCCTTCT GAGAAATGGT
CTCGGAACAC AGCAACAAAC AACTAACCCC GAGAATTTAT CCTTGGGGAT TAAACTCGGT GGTGACAACT ATGCCCTATG GGCAACCCTG ATGAAGAAAG CTATTGGGGG AAGGGGGAGA
GGTTCTCACA TTACAGGGGA GCCAACACCT CCATCCAAAA CTGACAAAAC TTATACAAGG TGGGAACAAG ATGATGAATG TGTTTTCACA TGGATTATCC AGAATCTTGA ATCCAATTTG
GTGAATAATG TGTTTGACCT TCATAAGAGG GCTAATTCAT TAAGGCAAGG GTCCGATACA CTAGAAGACT TGTGGAACAA ACTGCAGAAC ATCTGGATGT CTATAGATAG GCGAGATCCG
AACCCTATGA AGGACCCAGA AGACATTCAG ATCTACAATA AGAAGACTCA AGAACAAAGA CTCTATCAAT TGCTAATGGC GGTTGATGAC AAGCTGGAAC CTGTCAAGAG AGATATCCTA
AAAAAGGATC CTCTTCCTTC CGTGGAAACA GCATATGCTA CAATTCGAAG GGAAGTAGCC TGGCTTAATA TACTAAAATC AGGCCCTTCT GATAGTGACT TGACTGAAAT TGGAATGGGT
TTGGCTGCTA AAGATTCTGC ACAGAGGTTT AAATTCCGAT CCAAAGAGAA AGAAGATAAA TCCAAGTTGT ATTGCACTCA CTGCAGGATG AAGAAACACA CTAAAGAGAC ATGTTTCAAG
CTGGTTGGCT ATCCTGAATG GTGGGAGGAT GGTCATAAGG AGAAAAATAA ACAGCGTTCC AGATCTGATG TCAAAGGGGC CTCGTCTGCA AGTGAAGATC CGTCTGAAAA AGGGAAAGGA
AGTGGCACTA GTTTTGGTGG AATGGCGGCG GACTCCTATG AAAAACTTGG AGGTAAAGGG TTTGAGAGTT ACACCTCAAA CCCCTCTCTT ATTAATTTCA AGTTTTTTCC CCCAGATGCT
TCTTTCTTTG ACAGGCTTGA CCAAGAATGT TTAAATGAAA CTTATGAAAA GCCCAAAGCT TGCCATGTTC ACCCCCAATC TAGGAAATCA ATGAACTGGA TCTTTGATTG CGGGGCTACG
GACACCATGT CCTATGATCC TAAAGACTTT GGTGACATGT CATCTCCAAA GAAGTCCCAT ATTGAGACTG CTAGTGGAGA AATTGTTGAA GTCAAAGGGG GAGGGTCAAT TACTTTTTCA
GAAAAAATGG AAATTAAAAA TTGTTTATAC ATTCCTTCAC TATCCTCAAA GTTATTATCT GCCAGTCAAG TGACAAAACA ACTCAATTGT GTGGTTCTTA TGTATCCAAC CTTTTGCATT
TTACAGGACA TTCGTACAAA GGAGATCATT AGGCGTGGTA CTGAACGAGG AGGCCTCTAT TATGTTGATG AGGTAGTTCA TAAGGGACAT GCCATGCTTG CTCACGGAAC AACCGAAAGG
CAACTTTGGT TATGGCACCG GCGACTTGGT CATCCTTCTT TTAGCTATCT TAAAATTTTG TTTCCTAGTC TTTTTTTGAA TAATTCCATT CATGAGAAAT GTGAAACCTG CATTCTTGCA
AAAAATCATA GGGTCTCATT TAATCAAAGT AATACTAGAG TTGATTCTGC TTTTTCGCTA ATCCATTCGG ATGTTTGGGG TCCAGCACCA AATTCCACTA ACAATCAAAT CAGGTACTTT
GTTTTATTTG TGGATGATTT CTCCAGAATG AAGAATTGGA TATACTTCAT GAAACATAAA TCAGAAGTGC CAGAAATATT TGTTTGTTTT TACAAAATGA TTTTGACTCA TTTTGGCAAA
AAAAATACAG ATTCTCCGTT CTGTTCTGAT AACGGAACAG AATTCGTCAA CCAAACAATG CAAATTTTTT TCAAAGCAAA TGGTCTTATC CATCAAACCA CTTGTCCAAA CACCCCTCAA
CAAAACGGCA CCTCAGAACG AAAAAATCGT ACTCTCCTTG AAAAAACTCG TGCTATTATG ATTGAATCTA GAGTCCCTCA TTCTCTTTGG CCGGAAGCTC TTGCTATCTT GCAAATCGTC
TACCAACCCA AAGGGGAGAA AGTAAGTGAA TCACTCGATT GGTTGCTATA TGAAAGTTGC TCTGAGGATG TTCCAACAGA GTCGGTAGAT GGCGCCACCG AACACGCCTC TTCCAACACA
AAAGAGACTG ACGAGGCAGT TTTTACCACC AATGATTCTC CCGAAGACGA TGTCCAACAA GAGATAAATG TCATGGATAC TACGAGCGAA TCAGCCGAAG AAAATGTCCA TCAAGAGGTA
AACAATTCAC AATGTCATAA TTCACAAAAT GCTACTGATC ATGACATTTC AGGAAGTTCA TTTGTTGAAA CTCAAACCTT TGTTCTTCCC CCAAGAAAAA ATAGAGGGGT TCCTCCTGAC
CGGTATTCAC CGGAACATGT TCCTCGTGCT TCTACATATC CGGTAAAAAC TGACAGGAAA GGAATGGCGA AGATTGCAAA GGCGTTTTCA ACTACTATTC TCTCTGAACA AATTCCTAAA
ACGGCTCAAG AAGCTAAGAA GATGACCGAA TGGCATGAGG CAATGAATAC CGAAATGGAA GCTCTAAGAA GGAATGGCAC ATGGGAGAGG TGTATGTTAC CACAAGGGAA GAAACCAGTC
GGGTGTAGAT GGGTGTTTAA TATAAAATAT AAATCTGATG GCACCATTGA GCGACACAAG GCAAGATTGG TTGCCAAAGG ATATACACAA ACATATGGTA TTGACTACTC TGAAACGTTC
TCTCCGGTTG CAAAGATTGA CACTATCAGA GTTTTATTTT CAATAGCCGT GAATAAAGAT TGGCCTCTTC ATCAATTTGA TGTAAAGAAT GTGTTCTTAC ATGGAGACTT GAAAGAAGAG
GTGTATATGG AGGCCCCAAC AGGGTTCTCT GATGATTTTC AAGAAAATGA GGTATGTAAA CTAAAAAAGG CGTTATATGG GCTCAAACAG TCTCCGCGTG CATGGTTTGG GAGATTTACA
ATGGCAATGA AGCAGTATGG CTACAAACAG AGTAATGGGG ATCATACCCT GTTTTACAAA AGGAGAGGGG AATTGGTCAC TTGTCTTATA ATATACGTTG ACGACATGAT TATAACGGGG
AATGACGAAG AAGAAATTAG CTCCCTTCGG AAAAACCTCT TCAAGGAATT CGAAATGAAA GACCTTAGGG GATTGAAGTA TTTCCAAGGA ATCGAGGTTC TTAGGTCAAG AGGAGGCATT
TATATTTCCC AACGGAAATA TATATTGGAT TTATTAGTTG AAGTTGGCAT GGTGGATTGC AAACCATATG ACACTCCCAT GGTTGTGAAT CACAAACTAA AGATAATTGA AGGGGCCAAA
CCAGCAAGTA AAGAAAGGTA CCAAAGGTTG GTGGGAAAAT TGATTTACCT GGCTCACACT CGACCCGACA TTGCATACGC GGTGGGAGTA GTTAGTCAAT TCATGCATCA TCCTCAAGAA
CACCATATGG AGGCAGTAAT GAGGATTATT CGATATCTCA AACGCACACT AGGAAGAGGC ATATTGTTTA AGAAAAATGG CCACCTTGAT GTTGAAGTAT TCACAGATGC TGATTGGGGA
GGGAATCCTA ATGACAAGCG ATCAACTGCC GGCTACTTTA CTCTTCTTGG AGGTAACTTG GTGACTTGGA GGAGGTCGGA CCAAGCACTG TATGGAGATG ACAGGACTAA AGGGATTGTG
GATTCATATG CTAAAGATGA GAAACTGTTC TTCAAAGAAT TCGCAGCTTC TATGGTCAAA CTTGGAAATG TAGGTGTCAT CGAAGATGGT GAAATTAGAG TGAAGTGTAA CGTCGTGAAT
TTAACAAAAT GA
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Retrieve as FASTA
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