View Redoxidase 13665

Entry information : HaPrxQ01 (HanXRQChr12g0354281)

Entry ID	13665
Creation	2016-05-11 (Christophe Dunand)
Last sequence changes	2016-05-11 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2017-11-23 (Catherine Mathe (Scipio))

Peroxidase information: HaPrxQ01 (HanXRQChr12g0354281)

Name (synonym)

HaPrxQ01 (HanXRQChr12g0354281)

Class

Atypical 2-Cysteine peroxiredoxin (type Q) [Orthogroup: PrxQ001]

Taxonomy

Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus

Organism

Helianthus annuus (Sunflower) [TaxId: 4232 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	HaPrxQ01 start..stop	S start..stop
PtPrxQ01	311	3.96e-109	1..217	1..213
PbPrxQ01	311	4.29e-109	1..217	1..214
EglPrxQ01	312	5.98e-109	4..216	60..267
EgrPrxQ01	313	9.84e-109	4..216	88..295

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '13665' 'join(702646..702852,702940..703077,703781..703870,703942..704157)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	702646..702852	205	N° 2	702940..703077	136	N° 3	703781..703870	88	N° 4	703942..704157	214
join(702646..702852,702940..703077,703781..703870,703942..704157)

Literature and cross-references HaPrxQ01 (HanXRQChr12g0354281)

DNA ref.	HanXRQ genome: HanXRQChr12 (702646..704157)

Protein sequence: HaPrxQ01 (HanXRQChr12g0354281)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	217
PWM (Da):	23312.18	Transmb domain:	i5-27o
PI (pH):	10.21

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MASTLAKHLLPSSLLPTTCNSTQSPKHHPSAAAAFRSHFHGLKLSISTTPSSGLTSSKASLLLTVVAGKVNKGSVPPSFTLKDQDGKSVSLSKFKGKPVVVYFYPADETPGCTKQACAFR
DSYEKFKKAGAQVVGISGDDAASHKAFAKKYRLPFTLLSDEGNKVRKDWGVPSDLFGTLPGRQTYVLDKNGVVQLIYNNQFQPEKHVDETLKLLQSL

Retrieve as FASTA

Remarks

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCGTCGACTTTGGCAAAGCACCTTCTTCCTTCTTCTTTGCTCCCTACTACCTGTAACAGTACCCAATCCCCCAAACACCACCCATCTGCAGCAGCTGCATTCAGATCACACTTCCAT
GGCCTCAAGCTCTCTATCTCCACCACCCCTTCTTCTGGTTTGACCAGCAGCAAGGCTTCCCTCCTCCTCACTGTTGTTGCTGGAAAGAGGTACGTACATTCATTCATTCATTCATATTTC
CGCTGGCTGCTCCATCTTACTAGTAATTCTCATTTTGTTTTGTTTTGTGTGTGTAGGTAAACAAAGGGTCTGTGCCCCCGTCTTTCACACTGAAAGATCAAGACGGTAAGAGTGTGAGCC
TCTCCAAGTTCAAAGGCAAGCCTGTTGTCGTCTATTTCTACCCTGCAGATGAAACCCCTGGCTGCACCAAACAGAGGTACATTCTAATCTCTTTCATTCATCATTACCTATCTATCTATA
TATATATATATATATGCTCAACAGTTACGAATTCCTTCCACAACTTCTTGTGCTTATAATTGTGCAACAGAAATAACAGCTTTGTGGTAATGTTTCACGATACCATAGACAACTATCTAT
ATATAAAACAAGATTGGGAATTTTGTATTTACAAAATGCTGATAGATTAACAACTAAATTAAACTAACAGTTTGACTCTGACTAAATTCTAACTCAAAAAGGTAGAACTACCAGCTGCCC
CGCACCTCCTATCAGTGCACACATGCCTGCCTGCCTGAGTTCTCCCCTTGTTGTTTTTAAAACATTGACACCCATGCAATGTGGGTGACACTCCCAGCTTGGTTGTTGGATCTTCTTTCT
GTCTGGCTTCCAAACTTTATCCCCACCTTGGCTAAATTCTCTCTTAAAATGTTTGTAATACCAAATAGTCTAAAGAGTTGGGACCTCCTACGAAGGCATTTTGTACATCACTGAATCAAA
TACATGTAGAGAAGCCAGGGGAGGTCAAAACCATGAGTTGGCTTGCCTCAATCAATGAAGTAGTAAAACCAGAGATTGGAGATAATTTCATGCTCCCATTCCTCTTCTAGTATGACAAAT
TTAGATAGAAACAAGTAACAGAAAGTATGATTTAATTAGATTTGTGATGCAATGGGCAGGCATGCGCATTCAGGGACTCATACGAAAAATTCAAGAAAGCAGGCGCACAGGTCGTTGGGA
TCAGCGGTGATGATGCAGCATCACACAAGAGGTAAGCCATCACCAATCAGCTAGCTTATTTCATGCTATGTAAAATAAGGTAACGAAATTTTGTTTCTCTAGGCGTTTGCAAAGAAATAC
AGACTCCCATTTACATTGCTGAGTGATGAGGGTAACAAAGTGAGAAAAGATTGGGGAGTTCCATCTGACCTTTTTGGTACATTGCCTGGTCGACAGACGTACGTTCTTGACAAGAATGGA
GTTGTCCAGCTTATCTATAACAACCAGTTTCAGCCTGAGAAGCACGTTGATGAGACCTTGAAGTTGCTTCAGAGTCTT

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA

cDNA►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

TTTCTTGTTT CACAGGAATT TCTGTATTTA TTTATTGAAA GTATAGATTT ATAGTGAGTA TTATGAAATA ACTTGGATGA GAAGCAGCCA CGTGGATGAA GAAATGTGAT GGGCATAACA CATATTTACT TACTGGTGCA TCATCTCAAT CTCATCCGAA CTCAGCTGCT TCACCCTATC TATCTATCAA TCTATCTTTG CAAGTGAAGT GAATCAACAA TGGCGTCGAC TTTGGCAAAG CACCTTCTTC CTTCTTCTTT GCTCCCTACT ACCTGTAACA GTACCCAATC CCCCAAACAC CACCCATCTG CAGCAGCTGC ATTCAGATCA CACTTCCATG GCCTCAAGCT CTCTATCTCC ACCACCCCTT CTTCTGGTTT GACCAGCAGC AAGGCTTCCC TCCTCCTCAC TGTTGTTGCT GGAAAGGTAA ACAAAGGGTC TGTGCCCCCG TCTTTCACAC TGAAAGATCA AGACGGTAAG AGTGTGAGCC TCTCCAAGTT CAAAGGCAAG CCTGTTGTCG TCTATTTCTA CCCTGCAGAT GAAACCCCTG GCTGCACCAA ACAGGCATGC GCATTCAGGG ACTCATACGA AAAATTCAAG AAAGCAGGCG CACAGGTCGT TGGGATCAGC GGTGATGATG CAGCATCACA CAAGGCGTTT GCAAAGAAAT ACAGACTCCC ATTTACATTG CTGAGTGATG AGGGTAACAA AGTGAGAAAA GATTGGGGAG TTCCATCTGA CCTTTTTGGT ACATTGCCTG GTCGACAGAC GTACGTTCTT GACAAGAATG GAGTTGTCCA GCTTATCTAT AACAACCAGT TTCAGCCTGA GAAGCACGTT GATGAGACCT TGAAGTTGCT TCAGAGTCTT TAGTTTATTT ATTTAATCAA CCTCACCCAC CCACCACAGC TTTTGTAGAC AAACAACCAA ACATCTCGTC TATCTTATGT TGTGAATCAT TCACTGATCG GTTGTACAAA TGATGAGCAA ACATATCTGT TCTACTATAT GCACGTTTCC AGAGTCTTCA CTGCTGCCCC CATTCCACTC CATGGAAGCC CACCAATCTG CTCATAAGGG ATGGGTTCGC TTTAATAAAA AATACAGTTG TGTACCAATT TAAATGAATT CTTAGTTTAT GACAATTTAT CGTCTAAAAT ATTTCTTTAA CCTATTTTTG TGGGATCTCT AGTTCTTGAC CACTCCATCC GACTACACGA ACTCACATCA GGGCAATAAA TCGCAGGTTA GTTTCTCGAT GATACAACGA TGGAAATCAT TTTGGTACAC CAATCGATTC AATTCTTCAT CATCATCATA
CTCAGTAA

Retrieve as FASTA