View Redoxidase 13676

Entry information : HaGPx03 (HanXRQChr03g0086571)

Entry ID	13676
Creation	2016-05-11 (Christophe Dunand)
Last sequence changes	2016-05-11 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2017-11-23 (Catherine Mathe (Scipio))

Peroxidase information: HaGPx03 (HanXRQChr03g0086571)

Name (synonym)

HaGPx03 (HanXRQChr03g0086571)

Class

Plant glutathione peroxidase [Orthogroup: Gpx2001]

Taxonomy

Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus

Organism

Helianthus annuus (Sunflower) [TaxId: 4232 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	HaGPx03 start..stop	S start..stop
HaGPx08	322	4.35e-114	69..235	1..166
HaGPx06	305	3.29e-107	69..235	1..167
HaGPx08_psc8	303	1.76e-106	69..235	1..166
CsGPx06	283	6.9e-98	14..235	6..227

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '13676' 'join(146703047..146703295,146704093..146704169,146704354..146704415,146704500..146704618,146704710..146704877,146704966..146704995)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	146703047..146703295	247	N° 2	146704093..146704169	75	N° 3	146704354..146704415	60	N° 4	146704500..146704618	117
N° 5	146704710..146704877	166	N° 6	146704966..146704995	28
join(146703047..146703295,146704093..146704169,146704354..146704415,146704500..1 46704618,146704710..146704877,146704966..146704995)

Literature and cross-references HaGPx03 (HanXRQChr03g0086571)

DNA ref.	HanXRQ genome: HanXRQChr03 (146703047..146704995)
Cluster/Prediction ref.	HanXRQ: HanXRQChr03g0086571

Protein sequence: HaGPx03 (HanXRQChr03g0086571)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	235
PWM (Da):	26187.56
PI (pH):	9.93

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MSCSSVRVFNNLIAQRFLIIPSRTLSNSLSISSVSSISNPTGLKRSWLSTRFCGTNRTLVWGTRSFQSMATQSKQSVYDFTVKDAKGQEVDLSKFRGKVLLIVNVASQCGFTNSNYPELT
TLYQKYKDGLEILAFPSNQFNGQEPGTNDEIQEFVCTRFKAEYPVFAVDVNGKKAEPLYDFLKSSKGGLLGDSIKWNFTKFLVDREGKVVDRYAPTTTPLSIEKDIKKLLGVA

Retrieve as FASTA

Remarks

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGTCGTGTTCATCAGTTCGTGTCTTCAACAACCTTATCGCTCAAAGATTTCTTATCATCCCTTCAAGAACCCTTTCAAATTCTCTGTCAATTTCATCTGTTTCTTCAATTTCTAATCCA
ACAGGCTTAAAAAGATCTTGGCTTTCTACAAGATTTTGTGGTACCAACAGAACCCTAGTGTGGGGTACAAGATCATTTCAATCTATGGCGACTCAATCGAAGCAATCTGTTTATGATTTC
ACTGTTAAGAGGTTTGTTTTCTTTTTAGGGTTTTCAAATGAAATGATTTTTGTTTGTTAAAGATTTGTTTCACATTGTGGATTTTACAAGTTTGATGTGAAATTGTTGTTAGTGTGTTGT
TATCTTGATTTTAGGGTTTTAAAATGATCTTCATTGATTATTGTATGTCATTAGATCTTGATCTTGTTTTTTTTTTTTTTTTTTTTTTTTGTTGATGGCCTTGATGGATACCTTGAAAGA
TTGTTTCTTTGTTTATTCTTTTTACATTTTTTTGTTTTTGGTTTTTGTTGATGGCCTTGATGGGTACCTTGAAAGATTGTTTCTTTGTTTATTCTTTTTACTTTCTTTTGTTTTTGGTTT
ATTGTTGATGGCCTTGATGGGTACCTTGAAAGATTGTTTCTTTGTTTATTTTTTTAACTTTTTTTTTTGTTTTTGGTTAATGGGTACCTTGAAGGATTGTTTCTTTGTTTATTTTTTTTT
TTTACTTTTTTTCGGTTGATGGGTACCTTGAAAGATTGTATCTTTGTTTAATTGTTTATTAATGGGTGTACTGAAAGATTGTTTCTTGATCTCTATGCTTTTATCTTTTTATTAATGGGT
GTCATGAAAGATTGTTTCTTGATTTTTTTTTTTTTTTTTTTTTGATTAATGGGTATTTTGAAAGATTGTTTTTTTTTCATCCTTTTTTGGGTAAATGGGTTATCTTGAAAGAATGTTTCT
TGATCTTGATCTTTTTTTATTGGTAAATGGGTATTTTGTAAGAATGTTTCTTGATCTTGATCTTTGTTTTTTGTTGGTTTTCATTCAGGATGCAAAGGGCCAAGAAGTGGATCTTAGCAA
GTTCAGGGGAAAAGTCTTGTTGATTGTTAATGTTGCATCACAATGTGGTAAACTATATGTCTCCATAATTAACCTCTTGTTTTTTTTAACAATAACTTTTTACCACCTAACCTTCACTTC
CAATGATTCGATTCGGGCAAAACACGATACCACTAGATCACTAGGTCATACGTATAATTAACCTCTTATTAATGAGCTCTTTCTTTAACTTCTGATATTGTTGTGTTGCAGTGGGTTCAC
AAATTCTAACTACCCTGAGCTGACAACCTTGTACCAGAAGTACAAGGATCAAGAGGTTCGGTTTTCCTATTGTTTAACTTCTCCACATCTTGGAATAACTTCCTGTAACTTAAAATCTTG
TTGTTATATGATTTTACAGGTCTTGAGATACTTGCATTTCCATCCAATCAGTTTAATGGGCAAGAACCAGGAACTAATGATGAGATCCAAGAGTTTGTTTGCACTCGCTTTAAAGCCGAG
TATCCCGTCTTTGCCAAGAGGTTGGTATTGTTCAAACTGTTTCATAAAACTTAACAAATACTATTCGGTTGTGTTTCGCTGATCAAATTCGTTGTCCAACGGTTAATGTAGGTTGATGTG
AACGGCAAAAAGGCCGAACCGCTGTACGATTTCTTGAAATCAAGCAAAGGAGGGCTTCTTGGTGACAGCATCAAGTGGAACTTCACTAAATTTCTGGTTGATAGAGAGGGAAAAGTAGTT
GACCGTTATGCTCCAACCACCACTCCTCTCAGCATTGAGAGGTAAACCGCGTTTTGTAACATAATCTTGTCGAAATTTGGCATGTGGGAAGCTCATGTTTTCTTGTTTGGTTTTGTTTTG
TTATTGCAGAAGGATATAAAGAAGCTGCTTGGGGTTGCT

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA

cDNA►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

AAGCCTCCAC GACAACCACC GTGGCTTCGA ACCGCCACGA CTGCCACGTA AGCACAACCT ACAACGACCA CGTATCAACC TCAATACCCA CATTCCACCC ACGCAAACGA GATTTATACC GTCATCATCT GTAGGAGATT TGTATAAATC AGAACCCCAA TGTCGTGTTC ATCAGTTCGT GTCTTCAACA ACCTTATCGC TCAAAGATTT CTTATCATCC CTTCAAGAAC CCTTTCAAAT TCTCTGTCAA TTTCATCTGT TTCTTCAATT TCTAATCCAA CAGGCTTAAA AAGATCTTGG CTTTCTACAA GATTTTGTGG TACCAACAGA ACCCTAGTGT GGGGTACAAG ATCATTTCAA TCTATGGCGA CTCAATCGAA GCAATCTGTT TATGATTTCA CTGTTAAGGA TGCAAAGGGC CAAGAAGTGG ATCTTAGCAA GTTCAGGGGA AAAGTCTTGT TGATTGTTAA TGTTGCATCA CAATGTGGGT TCACAAATTC TAACTACCCT GAGCTGACAA CCTTGTACCA GAAGTACAAG GATCAAGGTC TTGAGATACT TGCATTTCCA TCCAATCAGT TTAATGGGCA AGAACCAGGA ACTAATGATG AGATCCAAGA GTTTGTTTGC ACTCGCTTTA AAGCCGAGTA TCCCGTCTTT GCCAAGGTTG ATGTGAACGG CAAAAAGGCC GAACCGCTGT ACGATTTCTT GAAATCAAGC AAAGGAGGGC TTCTTGGTGA CAGCATCAAG TGGAACTTCA CTAAATTTCT GGTTGATAGA GAGGGAAAAG TAGTTGACCG TTATGCTCCA ACCACCACTC CTCTCAGCAT TGAGAAGGAT ATAAAGAAGC TGCTTGGGGT TGCTTAAGTG TTGCTGCACT CATGTGCTCT TGTTTGGTTT TATGTGATTT CCAGCTTTGA ACTTTTATCT TCTGAACCTA GTTTATATAG AAGCTAAGTT
TGTAGTAATA AAACAACATT TTACATGTTT GGTAAAGAGA TCTGTTTGAA TATGATCAAT ATCATTGTTT TTAAACTTGT

Retrieve as FASTA