View Redoxidase 13700

Entry information : HaFer04 (HanXRQChr16g0509611)

Entry ID	13700
Creation	2016-05-12 (Christophe Dunand)
Last sequence changes	2017-12-08 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2017-12-08 (Christophe Dunand)

Peroxidase information: HaFer04 (HanXRQChr16g0509611)

Name (synonym)

HaFer04 (HanXRQChr16g0509611)

Class

Ferritin [Orthogroup: Fer003]

Taxonomy

Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus

Organism

Helianthus annuus (Sunflower) [TaxId: 4232 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	HaFer04 start..stop	S start..stop
HaFer05	507	0	1..247	1..247
HaFer03	342	2.36e-120	19..244	21..246
ThasFer04	341	8.07e-120	33..240	51..257
SpolFer02	339	4.14e-119	26..245	42..261

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '13700' 'join(64606794..64607056,64607699..64607782,64607855..64607915,64608054..64608141,64608256..64608317,64608464..64608529,64608611..64608674,64608952..64609004)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	64606794..64607056	261	N° 2	64607699..64607782	82	N° 3	64607855..64607915	59	N° 4	64608054..64608141	86
N° 5	64608256..64608317	60	N° 6	64608464..64608529	64	N° 7	64608611..64608674	62	N° 8	64608952..64609004	51
join(64606794..64607056,64607699..64607782,64607855..64607915,64608054..64608141 ,64608256..64608317,64608464..64608529,64608611..64608674,64608952..64609004)

Literature and cross-references HaFer04 (HanXRQChr16g0509611)

DNA ref.	HanXRQ genome: HanXRQChr16 (64606794..64609004)

Protein sequence: HaFer04 (HanXRQChr16g0509611)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	247 (151)
PWM (Da):	27700.01 (15435.4)	Transmb domain:	i5-27o
PI (pH):	5.07 (6.50)	Peptide Signal:	cut: 24 range:24-174

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MSLQTPFSSASPFLLKNLGKSIGFVRSGVVRCGSSVGEENLVMSS
GVLFQPFEEVKKEEFIVPISPQKSLARQRYFDEPEAAINEQINVEYNVSYVYHALYAYFDRDNIALKGLAKFFKESSEEEREHAEKLMQYNMRGGRVKLNTIVAPPSEFEHVEKGDALYAMELALSLEKLVNEKLLCLHVADRNNDPQMADFIESEFLVEQV
EAIKKISEYVSQLRRVGKGHGVWHFDQMLLDGGGAAA

Retrieve as FASTA

Remarks

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGTCTCTTCAAACACCATTCTCATCAGCATCACCATTTTTGTTGAAGAATCTGGGAAAATCGATCGGATTTGTGAGATCAGGGGTTGTGCGTTGTGGATCAAGTGTTGGTGAGGAGAAT
CTGGTGATGAGTAGTGGAGTGTTGTTTCAGCCGTTTGAAGAAGTAAAGAAGGAGGAGTTTATTGTGCCGATTTCGCCTCAAAAATCGCTTGCTCGTCAACGCTATTTTGATGAGCCTGAA
GCTGCCATTAACGAGCAAATTAAAAGTAAGTTTTTCATTTTTTTATATGAAAAAACTGTGATATGTACATTTTTTTTTTGTATTCGATATATTGTTTATTTGGTGCTTACCTGGAGACAT
AGACACCTCTTTTCATGTAATTACTTTTTAAAATCCAGATATATGTTAGAATTGAAAAAGACCGAAGAAACAGTGAGTTTTGAGTGTGTTAATTGGAATTTGAAATGAAAGTGCTCAACA
AGATTTAATATATTTATTTATTGTAGACATATGTGATGATAGTTCATAGTTTTTGAATTTTAGTTACTTTTTTCGTCTATGTGATTTGTCAAAAATCACTATTTCAGTCCATTAGTTTAA
AAATTACGATTTGAGTCCCTGTGGTTTCACTTTGGTAACCATCTCAGTCCATCTCGTAACCATTTCAGTCCCTGTACTAACAAAATAAATGGATTGAAATGGTTATGAAAGTAAAACTAC
AGGGACTGAAATGGTTACGAAAGTGAAACCATAGGGACTGAAATCGCAAATTTTAAACTAATGGACTGAAGTAGTGATTTTTGACATACCAAAGGAACGAAAACAGTAGTTAACTCTACT
TTTAACTATATTATTGGAACTTTTAGCTTATGATTGGGTTTATTTTGTTTCTTTGTTAATGATGCAGTGTGGAATATAATGTCTCCTATGTGTACCATGCTTTGTATGCTTACTTTGATC
GGGACAACATAGCACTGAAGGGCCTTGCCAAAAGTAAACAAATCACATAAACTCCAACCCCTTTTTATCTTTACATGCTTATAAACTTTCTTTTGTTTTTATCAGGTTCTTCAAGGAATC
AAGTGAAGAAGAAAGAGAACATGCTGAGAAGTTAATGCAATATCAGAGGTCTTTTTCGCACTATTATTATTTTATAAGATTTTTAAACAACATAGTAATTAGTTCCTTTTATGCAAATCC
CATTGTTATACACACACATATATACATAAACATATACATCAGCAACTAAACCTTATATCTTTGTAGAATATGAGAGGTGGAAGAGTGAAGTTGAACACCATAGTTGCGCCACCTTCAGAG
TTTGAACATGTGGAAAAGGGAGATGCTTTATATGTGGTAAGCACAACTCAGAAATTACCCATCAAGTACAATAATGATTTCAACTTAATTAGCAGTTGTTTAACAAATATTCATCCTTAT
TTCGCCTTTAATTTATAAATTATCTGTCAGCAATGGAGCTAGCGTTGTCTTTGGAGAAACTAGTCAATGAAAAGCTTCTTTGTTTGCACGCGCGGTATGCCGTTTTATCTTGATATTTAA
GTATTTTATATATCTCACATGATAACTAATGCTTGAGGAAGAACTTATCCCCAAATCCGGATCATGACACCTTGTCATACATACACTATGTTAAATATAAATGTGTTTTCCAAATTGAAG

GTGGCTGATAGGAACAATGATCCGCAAATGGCAGACTTCATTGAGAGCGAGTTTCTTGTTGAGCAGAGGTGAAACTCCTAGTTGTTGATATATAAGTGTGTGTGATATATAAAAGTCTAA
TCTGCATTACTTTTTATGTTGTGTGGCAGGTTGAAGCAATAAAGAAAATTTCAGAATATGTTTCTCAACTGAGAAGAGTAGGGAAAGGCCATGTGGTAAGATTATTATCCTTATGACTTG
TAACTTATTCAACATACAATACAAGAGCAAAACTGTTTGGTCAACCTGATTAGTTATAGTTCATTTCAAACATGACTCGTTTATCAAATGGGTTAAAATGTCATTAAAATGATTCCAAAA
GTAAAAAAGGGGTTGATAGATTGTAATCGTGTTGTAAACGAGGTTAGTGGGTCGTACTTGTAAAACGATGTTTATTCAGAACTTTTTTACATTTAAATGGGCTAGTGGGTTGACTAACAA
TTTGAACTGCAGGGGTATGGCATTTTGATCAGATGCTTCTTGATGGGGGTGGTGCTGCTGCTGTT

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA

cDNA►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

TTTAAATCTT CCTCCTCCTC ATCAGATCAA AACACACACA CACACACACA CACACACACA TTGATAACAA AATGTCTCTT CAAACACCAT TCTCATCAGC ATCACCATTT TTGTTGAAGA ATCTGGGAAA ATCGATCGGA TTTGTGAGAT CAGGGGTTGT GCGTTGTGGA TCAAGTGTTG GTGAGGAGAA TCTGGTGATG AGTAGTGGAG TGTTGTTTCA GCCGTTTGAA GAAGTAAAGA AGGAGGAGTT TATTGTGCCG ATTTCGCCTC AAAAATCGCT TGCTCGTCAA CGCTATTTTG ATGAGCCTGA AGCTGCCATT AACGAGCAAA TTAATGTGGA ATATAATGTC TCCTATGTGT ACCATGCTTT GTATGCTTAC TTTGATCGGG ACAACATAGC ACTGAAGGGC CTTGCCAAGT TCTTCAAGGA ATCAAGTGAA GAAGAAAGAG AACATGCTGA GAAGTTAATG CAATATCAGA ATATGAGAGG TGGAAGAGTG AAGTTGAACA CCATAGTTGC GCCACCTTCA GAGTTTGAAC ATGTGGAAAA GGGAGATGCT TTATATGCAA TGGAGCTAGC GTTGTCTTTG GAGAAACTAG TCAATGAAAA GCTTCTTTGT TTGCACGCGG TGGCTGATAG GAACAATGAT CCGCAAATGG CAGACTTCAT TGAGAGCGAG TTTCTTGTTG AGCAGGTTGA AGCAATAAAG AAAATTTCAG AATATGTTTC TCAACTGAGA AGAGTAGGGA AAGGCCATGG GGTATGGCAT TTTGATCAGA TGCTTCTTGA TGGGGGTGGT GCTGCTGCTG TTTGAAGAAT TTGGGTAGTC TAGCTAATGG CATTAGGTGT GTGTTTGATG GTGTTTAATT CAGTTTAGTA ACTACTATGA ATCACGGGCT GTGGTTTCCG GTGAAGTTAT GTTATATGTT GGCTAGTTAA ACTACTTTTA ATTGCTATTG TTGAATTTAT ATTGTTATTA TTATATTAGT TTTTAAACAT AAATTAAAGT GTGGTTTGTT GTCGGTTAAA ACATTCATTC AAAAGATTTA TTAAACATGT ATACTTTATC CGGTAATACT
TCTTAAGAAA CATGACCGAT AGTC

Retrieve as FASTA