View Redoxidase 13699

Entry information : HaFer03 (HanXRQChr14g0459361)

Entry ID	13699
Creation	2016-05-12 (Christophe Dunand)
Last sequence changes	2016-05-12 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2017-11-23 (Catherine Mathe (Scipio))

Peroxidase information: HaFer03 (HanXRQChr14g0459361)

Name (synonym)

HaFer03 (HanXRQChr14g0459361)

Class

Ferritin [Orthogroup: Fer001]

Taxonomy

Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus

Organism

Helianthus annuus (Sunflower) [TaxId: 4232 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	HaFer03 start..stop	S start..stop
HaFer06	428	2.27e-154	1..246	1..245
HaFer01	413	1.36e-148	1..243	1..241
HaFer02	407	2.55e-146	1..246	1..251
LeFer01	392	4.51e-140	1..247	1..257

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '13699' 'join(167095315..167095583,167095988..167096071,167096169..167096229,167096365..167096452,167096541..167096602,167096724..167096789,167096891..167096954,167097049..167097095)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	167095315..167095583	267	N° 2	167095988..167096071	82	N° 3	167096169..167096229	59	N° 4	167096365..167096452	86
N° 5	167096541..167096602	60	N° 6	167096724..167096789	64	N° 7	167096891..167096954	62	N° 8	167097049..167097095	45
join(167095315..167095583,167095988..167096071,167096169..167096229,167096365..1 67096452,167096541..167096602,167096724..167096789,167096891..167096954,16709704 9..167097095)

Literature and cross-references HaFer03 (HanXRQChr14g0459361)

DNA ref.	HanXRQ genome: HanXRQChr14 (167095315..167097095)

Protein sequence: HaFer03 (HanXRQChr14g0459361)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	247
PWM (Da):	27350.99
PI (pH):	5.65

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MLLRAPPTIFLRTGSGENFSGTLISSAPSTIVCAAAKGGSSNSKPITGVVFEPFEEVKKELNLVPTVPQQSLARQKYADESEAAINEQINVEYNVSYVYHAMYAYFDRDNVALKGLAKFF
KESSEEEREHAEKLMEYNKRGGKVKLQSILMPLSEFDHAEKGDALYAMELALSLEKLTNEKLLHLHVANKKNDVQLADFVESEFLGEQVEAIKKISEYVAQLRRVGKGHGVWHFDQALLN
DGAA

Retrieve as FASTA

Remarks

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGCTTCTCAGAGCTCCACCGACTATCTTCTTGCGGACCGGCTCCGGCGAGAACTTCAGTGGAACTCTGATCTCATCGGCTCCCTCGACCATCGTTTGCGCAGCGGCCAAAGGCGGTTCT
TCCAACAGTAAGCCGATCACAGGCGTTGTGTTTGAACCGTTTGAAGAAGTCAAAAAGGAGCTCAATCTTGTCCCTACGGTTCCTCAACAGTCTCTTGCTCGTCAAAAGTACGCTGATGAA
TCCGAAGCCGCCATCAATGAACAGATCAAAAGTAGTTTTTCTTACTCTCAATTTCTCATTTTTGTTCCTTCTGTTTATTAATTTTGTTATTAGGTTAAGTCATAAGTGACTGTTTATTGA
CTTTGTGTTTATATGTTATAATTGAAACCTTATTAGTTTGGTATTGGAATTTTAACGTGAGTTTAGAATGCACAGTAGGTGTTTGATGAAATGATTAGGAGAACATAAGGTCTAGTTATA
TGTGTATATGATTAGGGCTTGCTGTACATGATGTTTGATACATTTTTCTGTATTTAATTGTCTTATGTTTATCAGTTTGATTGGGACTGAACTTTTTTTTAATTCATTTTTAAGTTTTGT
ATACATTTGTTAAAGGATTGATGGTGACTTTGTTCTTATTTTTATGATATATTTCTGTTTTCTGTTTGTTTTCAGTGTTGAGTACAATGTTTCATACGTGTACCATGCTATGTATGCCTA
CTTTGATAGGGACAATGTTGCTCTCAAGGGGTTAGCCAAAAGTAAGTTACTAAAATCGTTGTCATTTTTATAAATAAACTTGTACTAACAATCGGTGGGACGGTGTTTGATCCGGCTATG
CTACATGAATACGTGTAGATTCTTTAAGGAGTCCAGTGAAGAAGAAAGGGAACATGCGGAGAAGCTTATGGAATACCAGAGGTGTTTGATAATTTCCCTATAAATAGCAGTCTTTGTGCT
TTGTGTTTCGTTATATGCTTGAGAACTTGATGCGTAGACTATTTGATCGTCACTGATTAAAATCGTCGAAATTTCTGTAAAACTTTCTGTTTTCAGAACAAACGTGGTGGGAAGGTGAAG
CTGCAATCTATTTTAATGCCCTTGTCAGAGTTTGATCATGCTGAGAAAGGAGACGCACTATATGTGGTAAGTTCTTTGTTAATTGCTTGGTTCGGTAAATTTTTTCAACTATTTTGGATT
GAATGATTATGGTTTTACTTCTTTGTTCTTGTAGCAATGGAGCTTGCATTGTCATTGGAGAAACTAACAAATGAGAAACTTCTACACTTGCACGCGCGGTATGACAATACTTTTTTTGCA
TTTTTTTGTATGCCCGCCAGTAAACCTGTTAATGGCTACTAATTAGGTGAAGATAAGGTTGGATTTGTGTTTCTGAATTGTGACATTTGATGAGAACAGGTGGCCAACAAGAAGAATGAT
GTGCAATTAGCTGATTTTGTTGAAAGCGAATTCTTGGGTGAACAGAGGTAGAATTATTGATTTCACTTTATATATTCTGATTCGATAAAGTGGTTATCTTTTCTCCTTTTTAAAAGGGGA
GATTGATAGTATTTTCACTTTGTTAAAGGTTGAGGCGATTAAAAAGATATCTGAATATGTTGCTCAACTGAGAAGAGTCGGCAAAGGACATGTGGTATATTTAGTGCTTAACATTTTTTA
TTTAAAGTTTGAGGCATCATCGATATACCATATGATCGCTAAAGGTAGTAATTTTCTTGAAATATCAGGAGTTTGGCATTTTGATCAAGCGCTTCTTAACGATGGTGCTGCTGTT

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA

cDNA►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

TCACTTATCA GTCAAAACTG TTATCCGTTT CCGTTGTTTC CCCCTTTTCC ACTCTCTCTC TCTCTCTCTC TCTTACTTTC TCTCTCTAAA AACCATGCTT CTCAGAGCTC CACCGACTAT CTTCTTGCGG ACCGGCTCCG GCGAGAACTT CAGTGGAACT CTGATCTCAT CGGCTCCCTC GACCATCGTT TGCGCAGCGG CCAAAGGCGG TTCTTCCAAC AGTAAGCCGA TCACAGGCGT TGTGTTTGAA CCGTTTGAAG AAGTCAAAAA GGAGCTCAAT CTTGTCCCTA CGGTTCCTCA ACAGTCTCTT GCTCGTCAAA AGTACGCTGA TGAATCCGAA GCCGCCATCA ATGAACAGAT CAATGTTGAG TACAATGTTT CATACGTGTA CCATGCTATG TATGCCTACT TTGATAGGGA CAATGTTGCT CTCAAGGGGT TAGCCAAATT CTTTAAGGAG TCCAGTGAAG AAGAAAGGGA ACATGCGGAG AAGCTTATGG AATACCAGAA CAAACGTGGT GGGAAGGTGA AGCTGCAATC TATTTTAATG CCCTTGTCAG AGTTTGATCA TGCTGAGAAA GGAGACGCAC TATATGCAAT GGAGCTTGCA TTGTCATTGG AGAAACTAAC AAATGAGAAA CTTCTACACT TGCACGCGGT GGCCAACAAG AAGAATGATG TGCAATTAGC TGATTTTGTT GAAAGCGAAT TCTTGGGTGA ACAGGTTGAG GCGATTAAAA AGATATCTGA ATATGTTGCT CAACTGAGAA GAGTCGGCAA AGGACATGGA GTTTGGCATT TTGATCAAGC GCTTCTTAAC GATGGTGCTG CTGTTTGAAC AATTATGAAG GTTTTTTGGG GTTGTTTCGG ATGAGGGATT AGTTGCTATT AACATTTTGG TTTGTTCTAC ACCAGAATTG CAATATGGAG ACTGTATAGT TCTTTATTTC CCTAAATGCT TTGATAATCT TGACGCTATT TTGGTTCAAT TGTAAGAACG CCAGATTTGG GTTCGTAATC TGTGGTTATA TATTGGAATT TGAATAATAT GAACCATGAA AATTGAGGCT TATGTATCAT GGTCAGGCTT ATGTAACATT ATTGGTTTGT TCTACACCAG AATTTCAATA AAGAATAGGT ATTAAAACAG GTTCACCCGT TATATTCACA TTTATTGTGG TAGTGGGATG GATGGCAACA
GTGTTGGCGG TGATAGCGA

Retrieve as FASTA