View Redoxidase 13697

Entry information : HaFer01 (HanXRQChr07g0203041)

Entry ID	13697
Creation	2016-05-12 (Christophe Dunand)
Last sequence changes	2016-05-12 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2017-11-23 (Catherine Mathe (Scipio))

Peroxidase information: HaFer01 (HanXRQChr07g0203041)

Name (synonym)

HaFer01 (HanXRQChr07g0203041)

Class

Ferritin [Orthogroup: Fer001]

Taxonomy

Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus

Organism

Helianthus annuus (Sunflower) [TaxId: 4232 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	HaFer01 start..stop	S start..stop
HaFer03	413	1.37e-148	1..241	1..243
HaFer06	383	8.8e-137	1..241	1..242
HaFer02	380	1.27e-135	22..241	30..248
LeFer01	376	9.44e-134	10..241	25..253

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '13697' 'join(89909038..89909300,89910541..89910624,89911109..89911169,89911237..89911324,89911898..89911959,89912495..89912560,89912660..89912723,89912816..89912871)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	89909038..89909300	261	N° 2	89910541..89910624	82	N° 3	89911109..89911169	59	N° 4	89911237..89911324	86
N° 5	89911898..89911959	60	N° 6	89912495..89912560	64	N° 7	89912660..89912723	62	N° 8	89912816..89912871	54
join(89909038..89909300,89910541..89910624,89911109..89911169,89911237..89911324 ,89911898..89911959,89912495..89912560,89912660..89912723,89912816..89912871)

Literature and cross-references HaFer01 (HanXRQChr07g0203041)

DNA ref.	HanXRQ genome: HanXRQChr07 (89909038..89912871)

Protein sequence: HaFer01 (HanXRQChr07g0203041)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	248
PWM (Da):	27731.09
PI (pH):	5.67

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MLLKPPATLFFQNGVVFGNGVVSTPPAIVCAAAKGGSPPNSRTITGVVFEPFEEVKKELSLVPNAPQQSLARQKYADQSEAAVNEQINVEYNVSYVYHAMYAYFDRDNIALKGLAKFFKE
SSEEEREHAEKFMEYNKRGGKVKLQSILMPLSEFDHAEKGDALYAMELALSLEKLTNEKLLHMQVANKNNDVQLADFVENNFLGEQVKAIKKMSEYVAQLRRVGKGHGVWHFDQMLLDEV
LPFDV

Retrieve as FASTA

Remarks

No EST.

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGCTTCTCAAACCTCCTGCAACTCTCTTCTTCCAAAACGGTGTCGTTTTCGGAAACGGTGTAGTTTCGACTCCGCCGGCGATCGTTTGTGCGGCGGCGAAAGGTGGTTCTCCTCCGAAC
AGTAGAACGATTACAGGTGTGGTGTTTGAACCGTTTGAGGAAGTGAAAAAGGAGCTCAGTCTTGTACCTAATGCTCCTCAACAGTCTCTTGCTCGTCAAAAGTATGCTGATCAATCTGAA
GCTGCTGTTAATGAGCAGATTAAAAGTGAGTTTTTTTTTTCGGTTTTTTGTTTTGTAGGTTGAATTTGTTGTTGTTGTTTTTTTTTTTTTTTTTTTTTGTTATGCATGCCAGGGGTTTGA
TAAGGCGGTCTAGTTATCTGCATATTTTATTAGAGCTTTTTGGATAGATATAAGTGACTTGTGTCTGTGTACATAATATTTAACACATTATTCTGCATTTATCTATTTTTTTTTTTTGGT
ATGAACAATCCATATGTTGCTAATTAAATGAACTCGAGTTTTTACTGAAACTCATTAAAAAAAACAAGCTCAAGCTGGTTTGCGAGCTGAACGAGCTTTTATATTTATAGAATTTTATTA
TTTTAATACTTATATATATATTAATATAATATTATGAATGCAAGTATAAATAAAAATATATTTAAATAATTATGAAATAAAATAACTAAATATATAATAAATTAGCCGAGCACGAGTTCG
ATCTTTAGACTGACTATAAAACAACCTCAAGCCAGCTTGCGAGCTGAACGAGTTTTTTATTTATAGAATTATATTATTTAGAGTAAATTGCCATTTTAGTCCCTGAGTTTTTGTCAAATT
TGCCATTTTAGTCAAAATAGTTTTTTTCCTCCTCTGGTCCTGACTTTTCTTTTTTCTTGTCATTTTGCTCACGTTGCCTAACTTAGTCTAAAAACCAGGTTATAATCAGGGGTATTTTTA
GCATTAAATTATTATGAGGTTTATAACTTATGTTGTAAACTACCCCGGTTATCACTACACAACAGTTATGCCAAAAATACTCCTGGTTATAACCAAATTTTTAGACTGAGTTAGGTAATG
TGATCAAAATGGCAAGAAAATGGAAAAGTCAGGGACCCAGAGGAGAAAAAAAACTATTTGGACTAAAATGACAATTTGGACCAAACCTCAGGGACTAAAATGGCAATTTACTCATTATTT
AATATATTGAATATATATTAATATAATAATTATCATTATCATTGTGAATGAAAAGTATAAATAAAAATATATGTGTAAATAATTATTAAATAAAATAACTAAATATATAATAAGTGAGCT
GAGCTCGATCTTTAGAAATAAAGTTCCAAACAGCTAGAAATAAAGTTCCAAACAAGCTGCGCTCAAGCCTAAACGAGCTCTGTTCTTTTCTTTTACTGTCATATTGCATTTAATTAATTT
TATTTAAAGGATTTTCTTGATGGTGACTTTATTCGTGTTTCTAATGATAATTTTGTTCCTTTCAGTGTTGAGTACAACGTTTCGTACGTGTACCATGCCATGTATGCATACTTCGATAGG
GACAATATTGCTCTCAAGGGTTTAGCCAAAAGTTAGTTACCAAAATCATTGTCATGTCAATTAATAACATATAGAGTTTAATGCCATTTTAATCCCTGTGGTGGTTTGGGCCATTTTGGC
AGTTTAGTCCAAAGGTTTCTTTTTTCGCATGTGGGTTCAAAAAGGTTTCACCGTTGCCATTTTAGTCCACTGGGTTAACTTCATCTATTTTTTCTGTTAACGAGAAGGGCAATTCGGTCA
TTTTATATGGCCGAATTGCCTTTCTAGTTAACAGAATTACATATAAAATGACCGAATTGCCCTTCTCGTTAACAGAAAAAATGGATGAAGTTAACCCAGTGGACTAAAATGGCAACGGTG
AAACCTTTTTGGACCCACATGTGAAAAATGAAACCTTTGGACTAAACTGCCAAAATGGCCCAAACCACAGGGACTAAAATGGCATTCAACTCTAATATATATTAATAATCAGTGTGACAA
CATTTACCCTGACTATGCTACATAAATACTTACAGATTCTTTAAGGAGTCCAGCGAAGAGGAAAGGGAACATGCCGAAAAGTTTATGGAATACCAGAGGTGTTTGATTCTAGCATTTCTT
CACTTAATTGTCACTGATTATAATCATAAAGTTTTTCTGTTTTAGAACAAACGCGGTGGGAAAGTGAAGTTGCAATCTATTTTGATGCCTTTATCCGAGTTTGATCATGCAGAGAAAGGA
GATGCACTTTATGTGGTAAGTTTTGTGTTATGATATGTTCGATTGCCCAAATATTAGTTGCTACATTACATTAAGTGAGATCTTGTGAATCACTTTGATTATTATTCGAAGAGTAAAATG
CAATTTTCGTCCCTGAGGTTTAGCCAGTTTTGCGACTTTCATCCAATGGTTTGTTTTTCCACTATATGGATCCAAAAGGTTTGAAATCTTGCCATTTCCATCCGGCTCGTTAACTCCATC
CATTTTTCTCTGTTTAGTAAGGGGTATTTCCGTCTTTTTTGTTAACTTAAAGGGCAATTCGGTCATTTTCACTTTATGTACAAGCATTTAGCATAATGTACATAAAGTGAAAATGACCAA
ATTACCCTTTAAGTTACCAAAAAAATTGGAAATACCACTGTCTTGACGGAGAAAAATGGATTGAGTTAACGAGACGGATGAAAATAGCAAGATTTCAAACCTTTTGGATCCACATGCGAA
AAACAAACCTATGGACGAAAGTCGCAAAACTGGCCAAACCTTAGGGACGAAAATGGCATTTTACTCTTGATTGAATTATTATGTTTCATTGGTTTGTTTATTTTGTAGCAATGGAGCTTG
CATTGTCGCTGGAGAAATTAACAAATGAGAAACTACTACACATGCAAGCGCGGTATGACATGTTCTTTTGCATTTTGTGTATGCCGATTAATGTTTAATATGAAGATCAAGAAAATGTGG
GATTTGGGTGTATGTTTAAAAAATGCTTGAGTCGTGCGCCTCAAGGCGCGCCTCGAGGCGAAACGACCAAAAAACGAGTCTGAGGCGCGCCTCATGGGGTTTTAACTGCATATGCGCCTC
AGAGGAGTTGAGGCGCTAAAAAAGGTTGCGCCTCAGGTGCGCCTCATGGGATTTTCATAGTTGTTTTTGATGTTTTTGACTTTTTGTGTCAATTTCAAGCATTTCATGTCTTTTTATGTA
TGTTTTTGATGATTTTGATGAATCTGATGATGAAATTAGTTGGTATTATTATTTTTATAATATATATAATTTTTATATTTATTTATTAATACCGCCTCGGCCTTACGCCTCATTTTGCCT
CGAGGCTTACGCCTCGTAAGGCAAAGGGAAAACGCCTCGAAACTCGTTTCCGTTCTTTTAAACAATTAAACCTCGGGTGTATGAATTGTGATATTTGATGAGAACAGGTAGCCAACAAGA
ACAATGATGTCCAATTAGCTGATTTTGTTGAAAACAACTTCTTGGGTGAACAGAGGTAGAAATATAATTTATAAATTCGACTACTTTATAAATATCCGGTAGTTCATTTGCGCCACGAGG
GGAAGTTGATAATTTTTTTTCATTTTGTTAAAAGGTCAAGGCGATTAAAAAGATGTCTGAATATGTTGCTCAGTTAAGAAGAGTCGGCAAAGGACACGCGGTAAACTTATTCGTAACCAA
TTTTTCACTTAAAATTGAATGTATCAAATTATTATTCGGTCACTAGAGATGACGATTTTCTTGCAATATCAGGAGTTTGGCATTTTGATCAGATGCTGCTCGACGAAGTGCTGCCGTTTG
ATGTATTG

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA

cDNA►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

GATTTTCTTC TTATCATTAT CAGTTTCAAT TTCTCGTTAA AATCATGCTT CTCAAACCTC CTGCAACTCT CTTCTTCCAA AACGGTGTCG TTTTCGGAAA CGGTGTAGTT TCGACTCCGC CGGCGATCGT TTGTGCGGCG GCGAAAGGTG GTTCTCCTCC GAACAGTAGA ACGATTACAG GTGTGGTGTT TGAACCGTTT GAGGAAGTGA AAAAGGAGCT CAGTCTTGTA CCTAATGCTC CTCAACAGTC TCTTGCTCGT CAAAAGTATG CTGATCAATC TGAAGCTGCT GTTAATGAGC AGATTAATGT TGAGTACAAC GTTTCGTACG TGTACCATGC CATGTATGCA TACTTCGATA GGGACAATAT TGCTCTCAAG GGTTTAGCCA AATTCTTTAA GGAGTCCAGC GAAGAGGAAA GGGAACATGC CGAAAAGTTT ATGGAATACC AGAACAAACG CGGTGGGAAA GTGAAGTTGC AATCTATTTT GATGCCTTTA TCCGAGTTTG ATCATGCAGA GAAAGGAGAT GCACTTTATG CAATGGAGCT TGCATTGTCG CTGGAGAAAT TAACAAATGA GAAACTACTA CACATGCAAG CGGTAGCCAA CAAGAACAAT GATGTCCAAT TAGCTGATTT TGTTGAAAAC AACTTCTTGG GTGAACAGGT CAAGGCGATT AAAAAGATGT CTGAATATGT TGCTCAGTTA AGAAGAGTCG GCAAAGGACA CGGAGTTTGG CATTTTGATC AGATGCTGCT CGACGAAGTG CTGCCGTTTG ATGTATTGTG AAGGTTTTGA GGTCATTTCG ATATTAGCTG ATCGGCTAGG TGTGTAGTTC
TTTATTTTCC TACTATGTTT TTTTTTTTTT TTTCAAATGC TTGACCTTAT T

Retrieve as FASTA