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Entry information : HaFer06 (HanXRQChr17g0560901)
Entry ID 13702
Creation 2016-05-12 (Christophe Dunand)
Last sequence changes 2016-05-12 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaFer06 (HanXRQChr17g0560901)
Name (synonym) HaFer06 (HanXRQChr17g0560901)
Class Ferritin    [Orthogroup: Fer001]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaFer06
start..stop		 S start..stop
HaFer03 428 2.26e-154 1..245 1..246
HaFer02 410 1.53e-147 1..246 1..252
LeFer02 386 5.89e-138 1..246 1..251
HaFer01 383 8.73e-137 1..242 1..241
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '13702' 'join(153955289..153955554,153956178..153956261,153956358..153956418,153956533..153956620,153956716..153956777,153956861..153956926,153957003..153957066,153957181..153957227)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 153955289..153955554 264 N° 2 153956178..153956261 82 N° 3 153956358..153956418 59 N° 4 153956533..153956620 86
N° 5 153956716..153956777 60 N° 6 153956861..153956926 64 N° 7 153957003..153957066 62 N° 8 153957181..153957227 45
join(153955289..153955554,153956178..153956261,153956358..153956418,153956533..1 53956620,153956716..153956777,153956861..153956926,153957003..153957066,15395718 1..153957227)


exon

Literature and cross-references HaFer06 (HanXRQChr17g0560901)
DNA ref. HanXRQ genome:   HanXRQChr17 (153955289..153957227)
EST ref. GenBank:   GE520999.1
Protein sequence: HaFer06 (HanXRQChr17g0560901)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   246
PWM (Da):   %s   27531.88  
PI (pH):   %s   5.07
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MLLRAPPTLSFLTRPTSNETQYRSLPPSTVVCAATKGGSSNHAPLAGVVFEPFEEVKKELNLVPSVPQQSIARQKYADAAEASVNEQINVEYNVSYVYHAMYAYFDRDNVALKGLAKFFK
ESSEEEREHAEKLMEYNKRGGKVKLQSIIMPLSEFDHEEKGDALYAMELALSLEKLTNDKLLNLHVANENNDVHLADFVESEFLGEQVEAIKKISEYVAQLRRVGKGHGVWHFDQMLLND
GAA

Retrieve as FASTA  
Remarks Complete sequence from genomic and EST.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCTCCTCAGAGCCCCACCCACTCTCTCTTTCTTGACCCGACCCACCTCCAATGAAACCCAGTACCGGTCTCTGCCGCCGTCCACCGTCGTCTGTGCGGCGACGAAGGGTGGGTCTTCA
AACCATGCCCCACTTGCTGGGGTTGTCTTTGAGCCGTTTGAGGAGGTGAAGAAAGAACTTAATCTTGTACCTTCGGTTCCTCAACAGTCTATTGCTCGCCAGAAATATGCTGATGCGGCT
GAAGCTTCTGTTAATGAACAGATCAAAAGTGAGTTTTCTTATTTATTATTACTCAGTTTTTACTGTTAATTTATGTAAATGTTTGCAATTAAAGTGCGATTGGTTATTGTCAGTCTATGT
TTGGTAAGTGAATGTCTGTTGTTTGGGAAAAAAAAGTCGAAGTTGATGTGAAGATAAATTGCCCACCAAGTGTTTGATATAAGGCCTAGGAGAAACAGTGTCATACATTAATGCTGGGAA
ACCGTTTTTAGAGAGCGGCTCGCCAGAAGCTCAAATTGAGCTGAGTTTAACGGGTTCGAGCTCGAGCCCAAAAAATAAGCCTGTTTAACAAATGAGTCCAAGCCCAAGCTTCACTTATGG
GGCTCGAGCAGGCTCACAAGCTTGAAGCGGGCCTATTATTTAATATTAATATGATTAAAAAATCTAAATAATATATATATATATATATATATATATTGTGTTATGTAAGTAAAATTAATA
ATAACAAACATATACATGTAGGGAGACGTTCAATCATTGGGAGGTATAAGTATTTAAGGAGAAAAAATTAGCCGTTCTAAAAGAAATAATAATAAACATATATAAGTTTATTTTTTTTTG
AAGGGCAAATTAGAATCACTGATGAGTTGTTGTTTTTTGGTCTCATTTCAGTGTTGAGTATAATGTTTCCTATGTGTATCACGCTATGTATGCATACTTTGATAGGGACAATGTTGCTCT
CAAAGGCTTAGCCAAAAGTAAGTTACTACTCCCATCTTAATATTTTTTACAATAACCAAGTGAAACGCGGTTTTTGTCTGGTTTATTGACTTGTGATACATTAAACGTTATAGGTTCTTT
AAGGAGTCTAGCGAAGAAGAAAGGGAACACGCTGAGAAGTTAATGGAGTACCAGAGGTTTTCGAGCATTTATCAGCTACCTCTAGTTTAATTTGCTTTATATGTGAGAAAATGGGTAGTG
GCACTTTCTCGGGTGTGGATAAAACTGGTAGAATTTTTTTAAATTTGCAGAACAAACGAGGCGGGAAAGTAAAGCTGCAATCGATTATAATGCCATTGTCTGAGTTTGATCATGAAGAGA
AAGGAGACGCTTTGTATGTGGTAAGTTTTGTATATACATATACCTTCTGTGTTTTTAATAAGCAAATATCAAAGTTATGGTTGTTAACTTGTTTTTAACTACTTTTTTTTCCTAGCAATG
GAGCTTGCATTGTCATTGGAGAAGTTGACAAATGATAAACTTCTAAACCTCCATGAGAGGTGCAAAAAATTACAGAAAATTAAAATATAGCATAACCGCAACTTAATTCGTGTTTCTGAC
ATGCAACTTTGGAATGAAACAGGTAGCCAATGAGAACAATGATGTGCATTTAGCTGATTTTGTGGAGAGTGAGTTTCTTGGTGAACAGAGGTGAATATCAAATTTCACTTTAAGTTAACC
GTTGGGCTTATAGTGATTCTAATATCTATTTTTTTTTTAATAAAAGGTTGAAGCAATTAAGAAGATATCCGAGTATGTTGCTCAACTAAGAAGAGTCGGCAAAGGGCATGTGGTAAAAGT
TTCAAAATTTCATTTCACATTTTAATTTATGAAGGTCTAGGTGTCATTTAATTTGACGTACCGTTGTTCATAGTCTTCAAAAATAGTAACCGTATTCCAATTTCAGGTGTTTGGCATTTT
GATCAGATGCTCCTGAATGATGGTGCTGCTGCT

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCTCCTCAGAGCCCCACCCACTCTCTCTTTCTTGACCCGACCCACCTCCAATGAAACCCAGTACCGGTCTCTGCCGCCGTCCACCGTCGTCTGTGCGGCGACGAAGGGTGGGTCTTCA
AACCATGCCCCACTTGCTGGGGTTGTCTTTGAGCCGTTTGAGGAGGTGAAGAAAGAACTTAATCTTGTACCTTCGGTTCCTCAACAGTCTATTGCTCGCCAGAAATATGCTGATGCGGCT
GAAGCTTCTGTTAATGAACAGATCAATGTTGAGTATAATGTTTCCTATGTGTATCACGCTATGTATGCATACTTTGATAGGGACAATGTTGCTCTCAAAGGCTTAGCCAAGTTCTTTAAG
GAGTCTAGCGAAGAAGAAAGGGAACACGCTGAGAAGTTAATGGAGTACCAGAACAAACGAGGCGGGAAAGTAAAGCTGCAATCGATTATAATGCCATTGTCTGAGTTTGATCATGAAGAG
AAAGGAGACGCTTTGTATGCAATGGAGCTTGCATTGTCATTGGAGAAGTTGACAAATGATAAACTTCTAAACCTCCATGAGGTAGCCAATGAGAACAATGATGTGCATTTAGCTGATTTT
GTGGAGAGTGAGTTTCTTGGTGAACAGGTTGAAGCAATTAAGAAGATATCCGAGTATGTTGCTCAACTAAGAAGAGTCGGCAAAGGGCATGGTGTTTGGCATTTTGATCAGATGCTCCTG
AATGATGGTGCTGCTGCT

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TCATCATCTT CTTCATCACT CACTCAAAAC CCTTCATTTC CCCTGTTCCA TAACCTCACA ATTCCTCTAA CTACAATGCT CCTCAGAGCC CCACCCACTC TCTCTTTCTT GACCCGACCC  ACCTCCAATG AAACCCAGTA CCGGTCTCTG CCGCCGTCCA CCGTCGTCTG TGCGGCGACG AAGGGTGGGT CTTCAAACCA TGCCCCACTT GCTGGGGTTG TCTTTGAGCC GTTTGAGGAG  GTGAAGAAAG AACTTAATCT TGTACCTTCG GTTCCTCAAC AGTCTATTGC TCGCCAGAAA TATGCTGATG CGGCTGAAGC TTCTGTTAAT GAACAGATCA ATGTTGAGTA TAATGTTTCC  TATGTGTATC ACGCTATGTA TGCATACTTT GATAGGGACA ATGTTGCTCT CAAAGGCTTA GCCAAGTTCT TTAAGGAGTC TAGCGAAGAA GAAAGGGAAC ACGCTGAGAA GTTAATGGAG  TACCAGAACA AACGAGGCGG GAAAGTAAAG CTGCAATCGA TTATAATGCC ATTGTCTGAG TTTGATCATG AAGAGAAAGG AGACGCTTTG TATGCAATGG AGCTTGCATT GTCATTGGAG  AAGTTGACAA ATGATAAACT TCTAAACCTC CATGAGGTAG CCAATGAGAA CAATGATGTG CATTTAGCTG ATTTTGTGGA GAGTGAGTTT CTTGGTGAAC AGGTTGAAGC AATTAAGAAG  ATATCCGAGT ATGTTGCTCA ACTAAGAAGA GTCGGCAAAG GGCATGGTGT TTGGCATTTT GATCAGATGC TCCTGAATGA TGGTGCTGCT GCTTGATGGA TTAAGTGCTG TTTTAGTTGT  AGCTTTAGAG ATTGTGGGCG ATTTAAGTTG TCTAAGTCCT TTTGTGACTT GTTATGCTAG TGACCGGTTA AAACTGGGTG TGAATGGTAT GCGAAATCTT GTGGCTTGAT TGTGTCTTTC  TCTTTTGTGT TATCGAGTTG GCTCGGTCTT TCTTGGTGAT TTTATGTGAA TCTTTTAGAG CCAGAAAATT GGTTTGAGGC TCAGAGCCAT TGCATGGTCA ATTAGTACAA ACAGGACCAT  AATATATATA TGGTTAGGGG TCGGCTTCAC ACAAGATTTA AGGGCCCCTA AAATCAATGT TTATGGTGTT TATGATTTTG AAAGAAAGAT TTAGATAGTT CTTGATCTGC TATGAAAATC 
ATACTATATT TGACCCAAAA ACCTAAATTT TAAAATTATG GCTTTAAAAC AGACTTAACA TTGGATCATT GAATATAAAT TTTATATTTG TATAGTTATA TTGATTT 

Retrieve as FASTA