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Entry information : HaPNC07 (HanXRQChr11g0339131)
Entry ID 13725
Creation 2016-05-13 (Christophe Dunand)
Last sequence changes 2016-05-13 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaPNC07 (HanXRQChr11g0339131)
Name (synonym) HaPNC07 (HanXRQChr11g0339131)
Class Plantacyanin    [Orthogroup: PNC001]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaPNC07
start..stop		 S start..stop
HaPNC11 206 1.71e-70 1..112 1..111
HaPNC22 202 3.49e-69 1..112 1..111
HaPNC20 202 3.49e-69 1..112 1..111
HaPNC12 202 3.49e-69 1..112 1..111
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '13725' 'join(100900374..100900551,100900712..100900887)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 100900374..100900551 176 N° 2 100900712..100900887 174  
join(100900374..100900551,100900712..100900887)


exon

Literature and cross-references HaPNC07 (HanXRQChr11g0339131)
DNA ref. HanXRQ genome:   HanXRQChr11 (100900374..100900887)
Protein sequence: HaPNC07 (HanXRQChr11g0339131)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   118 (89)
PWM (Da):   %s   12277.47 (9337.0) Transmb domain:   %s   i98-117o
PI (pH):   %s   10.24 (10.42) Peptide Signal:   %s   cut: 30 range:30-118
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAKGRGSAMVSMAVLCLHVAALQCEIAQAATYAVGGNGGWTFNVS
AGENGKKFKAGDILVFNYQKGAHNVVVVNKAGYVGCSTTPRNAKVYTSGKDKIRLVKVLTASFVVYLITVVL

Retrieve as FASTA  
Remarks
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTAAGGGAAGAGGCAGTGCAATGGTGTCAATGGCTGTGCTATGTCTACACGTGGCGGCACTTCAATGCGAGATAGCTCAGGCAGCTACTTATGCCGTCGGCGGTAATGGTGGCTGG
ACGTTTAACGTCTCGGCTGGGGAAAATGGCAAGAAGTTTAAGGCCGGCGACATCCTTGTGGTATCATCTCAACATCCTATCACTAGTTTACTTGCTTAGTTCTTTTTATAGGTAGCAATT
TCAACCGATTTAGTTAACTTATTCTAAGTTCATTTAAAGTTTTAACAATAACAATAACAATAATAAAATGGTTACTTAAAATGATTTTTGATGGGGACAGTGTTCAACTACCAAAAAGGA
GCACATAATGTGGTGGTTGTGAACAAGGCAGGGTATGTTGGGTGTAGCACTACCCCAAGAAATGCAAAGGTTTACACAAGTGGTAAAGATAAAATAAGGCTTGTAAAGGTCTTAACAGCT
TCATTTGTAGTCTACCTGATCACTGTGGTGCTGGCA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTAAGGGAAGAGGCAGTGCAATGGTGTCAATGGCTGTGCTATGTCTACACGTGGCGGCACTTCAATGCGAGATAGCTCAGGCAGCTACTTATGCCGTCGGCGGTAATGGTGGCTGG
ACGTTTAACGTCTCGGCTGGGGAAAATGGCAAGAAGTTTAAGGCCGGCGACATCCTTGTGTTCAACTACCAAAAAGGAGCACATAATGTGGTGGTTGTGAACAAGGCAGGGTATGTTGGG
TGTAGCACTACCCCAAGAAATGCAAAGGTTTACACAAGTGGTAAAGATAAAATAAGGCTTGTAAAGGTCTTAACAGCTTCATTTGTAGTCTACCTGATCACTGTGGTGCTGGCA

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATCTATTGTT TAAGTGAACC ATGGCTAAGG GAAGAGGCAG TGCAATGGTG TCAATGGCTG TGCTATGTCT ACACGTGGCG GCACTTCAAT GCGAGATAGC TCAGGCAGCT ACTTATGCCG  TCGGCGGTAA TGGTGGCTGG ACGTTTAACG TCTCGGCTGG GGAAAATGGC AAGAAGTTTA AGGCCGGCGA CATCCTTGTG TTCAACTACC AAAAAGGAGC ACATAATGTG GTGGTTGTGA  ACAAGGCAGG GTATGTTGGG TGTAGCACTA CCCCAAGAAA TGCAAAGGTT TACACAAGTG GTAAAGATAA AATAAGGCTT GTAAAGGTCT TAACAGCTTC ATTTGTAGTC TACCTGATCA 
CTGTGGTGCT GGCATGA 

Retrieve as FASTA