View Redoxidase 13744

Entry information : HaFSD01 (HanXRQChr08g0223311)

Entry ID	13744
Creation	2016-05-24 (Christophe Dunand)
Last sequence changes	2016-05-24 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2017-11-23 (Catherine Mathe (Scipio))

Peroxidase information: HaFSD01 (HanXRQChr08g0223311)

Name (synonym)

HaFSD01 (HanXRQChr08g0223311)

Class

FeSOD [Orthogroup: FSD002]

Taxonomy

Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus

Organism

Helianthus annuus (Sunflower) [TaxId: 4232 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	HaFSD01 start..stop	S start..stop
HaFSD03	403	2.27e-143	1..270	3..255
LeFSD02	373	1.09e-130	1..260	1..259
NoffFSD02-1B	369	2.33e-129	4..273	1..275
AtFSD02	369	2.97e-129	33..300	36..300

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '13744' 'complement(join(59049873..59050085,59050310..59050333,59050433..59050459,59050585..59050703,59051289..59051649,59051752..59051826,59052804..59052847,59052919..59052976))'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	59052919..59052976	56	N° 2	59052804..59052847	42	N° 3	59051752..59051826	73	N° 4	59051289..59051649	359
N° 5	59050585..59050703	117	N° 6	59050433..59050459	25	N° 7	59050310..59050333	22	N° 8	59049873..59050085	211
complement(join(59049873..59050085,59050310..59050333,59050433..59050459,5905058 5..59050703,59051289..59051649,59051752..59051826,59052804..59052847,59052919..5 9052976))

Literature and cross-references HaFSD01 (HanXRQChr08g0223311)

DNA ref.	HanXRQ genome: HanXRQChr08 (59052976..59049873)

Protein sequence: HaFSD01 (HanXRQChr08g0223311)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	307
PWM (Da):	34770.02
PI (pH):	4.79

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MASVTTIASHPTSAFISTPEFSRLSQSLHSSQRRRCSRKSVCGTISASIDLKPPPYALNALEPHMSKETLEYHWGKHHRGYVNNLNKQIEGTELDEMSLESIISASYNKGDILPAFNNAA
QVWNHEFFWESMKPGGGGKPSGELLELINRDFGSFEGLIHEFKLAATTQFGSGWAWLAYKEHKLDIPNARNPRPSEEDRKLVVVKSPNATNPLVWEYHPLLTLDVWEHAYYLDYENRRTD
YISTFLNKLVSWETVSSRLEAAKVLIADREREMAEIDAIDEMDTIEPEDGDMYFGSDADEFVDDD

Retrieve as FASTA

Remarks

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCGTCTGTCACCACAATCGCTTCCCATCCAACGTCCGCCTTTATTTCCACCCCAGGTTTTTCCATCATTTACTCCTATCCACACTTACTTGTTTCTATTGGATAATTAAATCTGAAT
CAATTGCAGAAAATTTTCTAGATTATCTCAGAGCTTACACTCGTCACAGAGGCAGGTCAGTTGTCTCTACTCAATTGTTTCCTTCAAATTCTCTAAAAAGAGATTCATGGTAGTAGATAA
AGTTGTTTGCTTTCTAGGGGTTTTGGGTATGTAAGCAAGGTGTTCGATGAAATGTCTGTCACTAAATAAAACTTTTATTTTTGTGTATCCGGGATTGAGAGAAGAAGTTATTCATTTTCT
AGCAACTTTTTTTAGGTTATAATGTGTCTGTGTTTGTTCTAAGCTGGACTTGTGTCATTAAGATTAGATGAAGTTGGTTACTAAAAAAAGATGCAATTTTTCCTGCTCATCATCATCATC
ATCATCATCATCATCATCATACACAGTATATCTCACCAATAGCAAAGCTAAGGTAGAGTTTGAGGAGGGTGAGATGTAGACAGCCTTACCTCTACCTGTAGGAATAGAAAGGCTGCTTCC
AATGAGACCCCCGGCTCGATTGTAGTTTTGCATCAAGCCTTGGACATAAGGCACATAACACTCAGCAATTGAGACAAACGCCTATTAGTGCATGTACCCCCTTGTCTTTCAGCTATCAAC
GCCACCACATGATGCATGATTAACCATCCCCCTCTTTTAACGTTATTTTCCTGCTATATATGAATATTCAAATGATCGTTGTCGTGTTTCTATATTAAAACCGATACCATTAAAGCAATT
TTCCAGTTGGTTTACAAAGGGTGAAGGTGAAGTATCAATTACAGAAAATGAAGTTCTGTTAGATGATATTCTTCATGAATTTTCATTTGCATAACTTCAATTTATAGTTCTCAAGTGTAT
TGAAAATTTCTAAAAGAATTCTCATTGCCCTAACTTTGAACTATAATTTCATGAGAAACACTATTTATGTTATGATACCGTTGTGTTGCAAGTGCAAATGACGATATTGGCTAAAAGATG
CGCTCTTTGATTCTATATAGATTTTGTTATTTCCATTTACTGTTTTTTGAAGAAACTAAATTTATGGTACAGAGAGACGGTGTAGTAGAAAATCTGTTTGTGGGACAATATCAGCCAGCA
TCGATTTGAAGCCACCTCCTTATGCATTGGTACGACGAATAATCGAATATATATCTCATAACTGTACTATAAGTTAAGTAATTTAATTATTTCTGTAATATATCTTCTATTTCCTGTTGC
GTGTATGGCAGAAAATGCTTTGGAACCACATATGAGCAAAGAGACATTGGAATATCATTGGGGAAAACACCACAGAGGTTATGTCAACAATCTAAACAAGCAGATTGAGGGAACCGAGTT
AGATGAAATGTCATTAGAAAGCATAATATCTGCTTCTTATAATAAAGGCGATATTCTTCCCGCCTTCAACAATGCTGCACAGGTTTGGAACCATGAATTTTTCTGGGAATCTATGAAACC
TGGTGGCGGTGGAAAGCCTTCGGGGGAACTTTTAGAATTAATAAACCGAGATTTCGGTTCATTCGAAGGCCTAATTCACGAGTTTAAGTTAGCTGCCACTACTCAGTTTGGTTCTGGTTG
GGCTTGGCTTGCATGTAAGCGTTTATTCCATCTAGGGGTGTGAATTTCTGACACATCCTGAAAACACCATACGAACCTAACATGAAATTCGCGGGTTTGGGTTTAGTCTAAAAGGGTTCA
AGTCTATTTCAGATTGAACCCGCAAACCCGTTTAGCTAAACGGGTCGGGTTCGGGTCAACCTGATTAACCCATTTATATTATATTATATAGTATTTTACCATATGTTTTATGTCATAAAT
TAAATTGGATGTGTATTTTATGCCATAACTATAACTTAAAAAGAGAAATTGACATAAGATCTTATAATTTATATTTAACTGTATTATATACATTTCTGTTTCTTGTAGTAAATTTTAATA
TATTAATTTGCAGAAAAAAATTAAAAAATTCGGGTGAACGGGTCGTGTTCGGGTCACCCCACGAATATTTGATTATTTGGGTCGTGTTCAGGTTCATCTAAAAGGTTCGGGTCGGGTTGA
ACCCACCAACCTGCAAACACAACCCGTTTAGCACCCCTAGTTCCATCAGATCCATAACCGAAAATTGGAAATTATATCGACCATTTTTCTTAAATCATTTTGATATTTTTTATTTGTAGA
TATAAAGAGCATAAACTTGACATACCAAATGCTAGGAATCCACGTCCCTCAGAAGAGGACAGGAAGCTTGTTGTGGTGAAGAGCCCGAATGCGACTAATCCTCTTGTGTGGGAGTACCAT
GTGAGTAGACAATAATACTATATACTTTTTGTTATCTTGATCTTAAATGAATCCTTAATTTTGTTGTTTTTCTTTGTGTTAAACTGTAACTGTTTTTTTTTTTTTTTTTTTTTTTGAATT
TCCAGCCCCACTCCTCACATTAGATGTTTGGGAGGTAAGATTTCTTCGCTTACATTTTCCGGTTTCTGCGATAAATAATCTATGTCGATGACGTATTCACTAACTTCACTTTGAATCTGA
TTTGTGATTGCAGCACATGCATACTACCTAGATTATGAGGTAAGAACTTGTTGATTCGATACAGGAAACAAATATACAAGCAACCCCTTTAGCCCATTTCATCTCACACTCTCACACACA
ATATGTGTGTGTGTGCACGTGTTGCGGGTGTCATACTAATAGTTTATGAATGTCCAAACACCCTTATTCATCACATGGTATAAATAAAGTGACCTTTTAGCCTGTCATACTAATAGTTTA
TGAATGTTTAATGTGTATTACAGAAAACCGTAGGACAGATTATATATCAACTTTCCTCAATAAGCTTGTATCATGGGAGACGGTGAGTTCCAGGCTCGAAGCAGCCAAGGTTTTAATAGC
AGATAGGGAAAGAGAGATGGCGGAAATCGATGCAATTGATGAGATGGACACAATAGAACCCGAGGATGGAGACATGTACTTTGGAAGCGACGCGGATGAATTTGTGGATGATGATGAG

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCGTCTGTCACCACAATCGCTTCCCATCCAACGTCCGCCTTTATTTCCACCCCAGAATTTTCTAGATTATCTCAGAGCTTACACTCGTCACAGAGGCAGAGACGGTGTAGTAGAAAA
TCTGTTTGTGGGACAATATCAGCCAGCATCGATTTGAAGCCACCTCCTTATGCATTGAATGCTTTGGAACCACATATGAGCAAAGAGACATTGGAATATCATTGGGGAAAACACCACAGA
GGTTATGTCAACAATCTAAACAAGCAGATTGAGGGAACCGAGTTAGATGAAATGTCATTAGAAAGCATAATATCTGCTTCTTATAATAAAGGCGATATTCTTCCCGCCTTCAACAATGCT
GCACAGGTTTGGAACCATGAATTTTTCTGGGAATCTATGAAACCTGGTGGCGGTGGAAAGCCTTCGGGGGAACTTTTAGAATTAATAAACCGAGATTTCGGTTCATTCGAAGGCCTAATT
CACGAGTTTAAGTTAGCTGCCACTACTCAGTTTGGTTCTGGTTGGGCTTGGCTTGCATATAAAGAGCATAAACTTGACATACCAAATGCTAGGAATCCACGTCCCTCAGAAGAGGACAGG
AAGCTTGTTGTGGTGAAGAGCCCGAATGCGACTAATCCTCTTGTGTGGGAGTACCATCCACTCCTCACATTAGATGTTTGGGAGCATGCATACTACCTAGATTATGAGAACCGTAGGACA
GATTATATATCAACTTTCCTCAATAAGCTTGTATCATGGGAGACGGTGAGTTCCAGGCTCGAAGCAGCCAAGGTTTTAATAGCAGATAGGGAAAGAGAGATGGCGGAAATCGATGCAATT
GATGAGATGGACACAATAGAACCCGAGGATGGAGACATGTACTTTGGAAGCGACGCGGATGAATTTGTGGATGATGATGAG

Retrieve as FASTA

cDNA►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

TAGAGCATAA CACCGTTAAC ACATTATTCT TTCAAAACCC AGAAACCCTC CCAAACCCCA ACCCAACTTA TCATTATCCT GTTACAATCT CTTCCAGTAA TGGCGTCTGT CACCACAATC GCTTCCCATC CAACGTCCGC CTTTATTTCC ACCCCAGAAT TTTCTAGATT ATCTCAGAGC TTACACTCGT CACAGAGGCA GAGACGGTGT AGTAGAAAAT CTGTTTGTGG GACAATATCA GCCAGCATCG ATTTGAAGCC ACCTCCTTAT GCATTGAATG CTTTGGAACC ACATATGAGC AAAGAGACAT TGGAATATCA TTGGGGAAAA CACCACAGAG GTTATGTCAA CAATCTAAAC AAGCAGATTG AGGGAACCGA GTTAGATGAA ATGTCATTAG AAAGCATAAT ATCTGCTTCT TATAATAAAG GCGATATTCT TCCCGCCTTC AACAATGCTG CACAGGTTTG GAACCATGAA TTTTTCTGGG AATCTATGAA ACCTGGTGGC GGTGGAAAGC CTTCGGGGGA ACTTTTAGAA TTAATAAACC GAGATTTCGG TTCATTCGAA GGCCTAATTC ACGAGTTTAA GTTAGCTGCC ACTACTCAGT TTGGTTCTGG TTGGGCTTGG CTTGCATATA AAGAGCATAA ACTTGACATA CCAAATGCTA GGAATCCACG TCCCTCAGAA GAGGACAGGA AGCTTGTTGT GGTGAAGAGC CCGAATGCGA CTAATCCTCT TGTGTGGGAG TACCATCCAC TCCTCACATT AGATGTTTGG GAGCATGCAT ACTACCTAGA TTATGAGAAC CGTAGGACAG ATTATATATC AACTTTCCTC AATAAGCTTG TATCATGGGA GACGGTGAGT TCCAGGCTCG AAGCAGCCAA GGTTTTAATA GCAGATAGGG AAAGAGAGAT GGCGGAAATC GATGCAATTG ATGAGATGGA CACAATAGAA CCCGAGGATG GAGACATGTA CTTTGGAAGC GACGCGGATG AATTTGTGGA TGATGATGAG TGATGGTTTT GGTGTTACGC AAGTGTAGTT TTGTATCGAG ATTTAGAAAC TAGTGTCAGA ATTGTAATAT GGTTGTAATG CTTATAGTTA GATATATTAG ATAAGTGTAA TATTTAACAA CTTAGAAGTT TGAAATGGCA AGAGAGAATG ATTTTTTAGA GTAAACTTTA GTTTTACCCC
CTGAGGTTTA TACAGGTGGA ATCACGTTTA CCC

Retrieve as FASTA