View Redoxidase 13782

Entry information : HaRboh06 (HanXRQChr06g0176071)

Entry ID	13782
Creation	2016-06-01 (Christophe Dunand)
Last sequence changes	2016-06-01 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2017-11-23 (Catherine Mathe (Scipio))

Peroxidase information: HaRboh06 (HanXRQChr06g0176071)

Name (synonym)

HaRboh06 (HanXRQChr06g0176071)

Class

Respiratory burst oxidase homolog [Orthogroup: Rboh003]

Taxonomy

Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus

Organism

Helianthus annuus (Sunflower) [TaxId: 4232 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	HaRboh06 start..stop	S start..stop
HaRboh03	1107	0	26..827	40..813
EgrRboh06	1096	0	6..827	9..857
EglRboh06	1094	0	6..827	9..857
EguRboh06	1093	0	6..827	9..857

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '13782' 'complement(join(36866872..36866981,36867078..36867156,36867237..36867365,36867824..36867937,36868186..36868333,36868423..36868547,36868662..36868764,36869075..36869190,36869265..36869357,36869449..36870276,36870768..36870881,36870965..36871013,36871107..36871269,36871371..36871683))'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	36871371..36871683	311	N° 2	36871107..36871269	161	N° 3	36870965..36871013	47	N° 4	36870768..36870881	112
N° 5	36869449..36870276	826	N° 6	36869265..36869357	91	N° 7	36869075..36869190	114	N° 8	36868662..36868764	101
N° 9	36868423..36868547	123	N° 10	36868186..36868333	146	N° 11	36867824..36867937	112	N° 12	36867237..36867365	127
N° 13	36867078..36867156	77	N° 14	36866872..36866981	108
complement(join(36866872..36866981,36867078..36867156,36867237..36867365,3686782 4..36867937,36868186..36868333,36868423..36868547,36868662..36868764,36869075..3 6869190,36869265..36869357,36869449..36870276,36870768..36870881,36870965..36871 013,36871107..36871269,36871371..36871683))

Literature and cross-references HaRboh06 (HanXRQChr06g0176071)

DNA ref.	HanXRQ genome: HanXRQChr06 (36871683..36866872)
EST ref.	GenBank: DY909844.1 [Fragment]
Cluster/Prediction ref.	HanXRQ: HanXRQChr06g0176071

Protein sequence: HaRboh06 (HanXRQChr06g0176071)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	827
PWM (Da):	93331.72	Transmb domain:	i279-301o362-384i417-439o459-481i657-674o
PI (pH):	8.62

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MKGADLESVQIDPIDGRKPAGLPPMLSRTSSKATSVQKGPPPSGGGAPKMGRTTSTAAKGLNSLRFLDRTVTGKEGDAWRSIERRFNQFAVAGKLPKDKFGICLGMGDSIEFAGELYDAM
ARRRNIDGEEGLTKEQVRDFWEEMTKKDLDARLSIFFDMCDKNGDGILSEEEVKVLIMSASANKLSNFKNQAGTYAALIMDELDPDHRGYIEMWQLEILLTGMVLKDNGKPNQKSENTKK
NQDTTNLAMSMIPQSYRHPTRRFINEGIELVQDNWKRFWVVTIFLVLNFLLFEWKFLQYSKLPTFEVMGYCVCVAKAAGETLKLNMALILLPVCRKTLTGLRETWLGKLLPFDDNINFHK
LISVAIVIGVIAHTVAHMGCNFIRISTCPPATFQRVYGNLLPAQPSYKDLMLTIPGVTGVIMDVMMFFCFLLATHAFRRNVINLPWPFNNLAGFTSFWYAHHLLIIVYILLILHGYFLVF
ATFWYMKTTWMYLVLPMLCYASERVFTASDHNHRVNIVKAIIYTGNVLALYMSKPNGFKYRSGMYLFVKCPNISGFEWHPFSITSAPGDDYLSVHIRTLGDWTTALKNEFAACEPPPQKP
QIGASASRAVKGNLVRLETKANVNVSVEEAQAIYPTIIIKGPYGAPAQDYRKYDILLLIGLGIGATPFISILKDLLNHQREAYDGKVPERAYFYWVTREQGSFEWFKGVMDDIAEYDKEH
IIEMHTYLTCVHEEGDARSALIAMVQSLQHAKNGVDVVSQSRIRTHFSRPNWKRVFSTLATNHDSARIGVFYCGSQTLVKSLESIAKEFSVETSTRFEFHKENF

Retrieve as FASTA

Remarks

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGAAAGGGGCTGATCTTGAAAGCGTTCAGATCGACCCAATAGATGGCCGTAAGCCTGCCGGGTTGCCACCGATGTTAAGCCGCACCTCTAGTAAGGCAACATCTGTTCAAAAGGGACCG
CCACCTTCTGGTGGAGGGGCGCCAAAAATGGGCCGCACAACATCAACGGCTGCCAAAGGGCTTAATAGCTTACGGTTTCTTGATAGAACCGTGACCGGAAAAGAAGGGGATGCATGGAGG
TCGATTGAGAGACGTTTTAATCAATTTGCTGTCGCGGGAAAGCTACCTAAAGACAAATTTGGAATCTGCCTTGGTTAGAAATTAAAATTAGTTTGAAAAATGTTGACATGCATATAATGC
ATGCAGGTGGTATATATATATTTTCTTTGTTGAATGTTCGTTTTATGTTTGTAGGAGAATGGGAGATAGCATCGAATTCGCAGGGGAGTTGTATGATGCAATGGCTAGGCGTAGGAATAT
AGATGGTGAAGAAGGGCTCACTAAAGAACAAGTTAGAGATTTTTGGGAAGAGATGACAAAGAAAGACCTTGATGCTCGGCTTAGTATCTTTTTCGACATGTAAATAGAAATTAGCCATGT
TTGTTCGATTGCGCTTGCTTATGATAGAATCAGAATATCCAAGCTAAAGATTTTATTGATTTAATGTTTTAGGTGTGTGACAAGAATGGGGATGGGATATTATCAGAGGAAGAGGTAAAA
GAGGTGAGAAATTATCAAAGAAACGTTTTTATCTTCCCATTCATTGCTAAAATCTTAAACTCATGCTGAATTTTCTCGTCCTTAAGGTGTACTTATAATGAGCGCTTCGGCGAACAAGCT
TTCGAATTTCAAGAACCAAGCCGGGACATATGCAGCTCTAATCATGGATGAACTAGACCCTGACCATCGTGGTTACATAGAGGTTATATATATATATATATATATGCTATTTTTGCAATA
TTTGAAGCCTGTTTGGATTTGTGTAACTTCTATAAATAACAAGTTTTTAGCATTTTATGAAAACTTCTGCTTCTTATTATCTTGGCCACTTTCATATCATTGGTAACAGAACTCATTATT
TGAAATTAAAATTAGATTACCTCTTTATCATGCTTTTAAACTAATTTAAGAGGCGATAACTCTCAATTTTAGTCATTTTCAAACAAGCAAATATATGATTGTTGCAACTTTAAGCAACAG
AATCAAACATAACACTATTTTCTATACCTGGTTTTGTTAGATTTAATTATCTTATTCTGATTTTCAGTATTATAGAATTACTTCAAAATACACATTCAAATTAAACACCCCTTTCACCTT
GTTACTATTTTTCTAAACTTTGTTTCTTGGGTTAGATTCACCCACACCCTACTATGAGTGGGATCTTACTGCGTATATTTTTTTTGGGGACAGATATGTGGCAACTCGAAATCCTGCTAA
CAGGCATGGTATTGAAGGATAATGGCAAGCCAAACCAGAAATCAGAGAATACTAAAAAGAATCAAGATACAACGAATCTAGCAATGTCTATGATCCCACAAAGCTATCGCCACCCAACTA
GAAGATTCATAAATGAAGGGATAGAACTTGTACAAGACAACTGGAAAAGATTTTGGGTAGTAACCATATTCCTCGTGCTTAACTTCTTACTTTTTGAATGGAAATTTCTTCAGTATAGCA
AACTGCCAACATTTGAAGTAATGGGTTATTGTGTATGCGTAGCCAAGGCTGCGGGTGAGACCCTAAAGCTTAACATGGCTCTAATTCTCCTTCCGGTTTGTAGAAAAACACTCACAGGCT
TACGAGAAACATGGTTAGGGAAACTTTTACCTTTTGATGATAACATCAACTTCCATAAACTTATCTCCGTCGCCATTGTGATTGGAGTTATAGCCCATACTGTAGCACACATGGGCTGCA
ACTTTATAAGGATTAGCACTTGCCCCCCAGCCACTTTTCAACGTGTTTATGGAAATTTGCTCCCAGCGCAACCATCGTACAAGGATCTAATGTTAACAATCCCAGGTGTTACGGGTGTGA
TCATGGACGTAATGATGTTCTTTTGTTTTCTACTCGCGACGCATGCTTTTAGAAGAAATGTCATAAATTTACCATGGCCGTTTAATAATTTAGCCGGTTTTACCTCCTTTTGGTATGCCC
ATCATCTTCTGATTATCGTTTACATCTTGTTGATCCTGCATGGGTACTTCCTCGTGTTCGCCACTTTTTGGTACATGAAAACAGTAAGCCAATTACCTAGTGATACCAACAGTTTACACA
TACCATCTTCGATTCGACGTTTGAACCATAAATGCAAACTTAATTACATTGCAGACACATGGATGTATCTTGTGCTCCCAATGTTGTGTTATGCAAGTGAGAGAGTGTTTACAGCCTCTG
ACCATAACCATCGGGTTAATATCGTTAAGGTGACCATCAATGCATCTATTATCTCTCTTTTTAACCACCCATAATGAAATCTGATGTGTATATCTCTTTATAGGCGCTATCATATACACT
GGAAATGTCCTAGCTCTCTATATGAGCAAACCTAATGGATTCAAGTACAGGAGCGGGATGTACCTTTTTGTTAAATGTCCAAATATATCAGGTTTCGAATGGTACAAATCTCTTTGATCC
AGTCCAACTTAATATAAAAATGTCAAAGAAGTATTGTTTTACAGCGATATAAATTTAAAGAAACCAAATGTACCCTATAAAATCCTACACATGGGAATTGCTAGGAGAGTCTGCAGAATA
ATTTTAAAGAAATGATTACGAAATAACCAATACGTATACACTATCTAATAAAATGCTCAAAACCTTTCACTTTCTCACAAAACAACCACATCTTCGGTCATTAAAGGGAAAGATGGTATT
TTGTTAAAGTTATCCCCAAGCTGAACTAAAACATGATATTGTTTATCGCAGGCGCATCCTTTCTCCATAACTTCTGCACCTGGAGATGATTACTTAAGTGTACATATTCGAACTTTAGGA
GACTGGACAACAGCCCTTAAAAACGAATTTGCAAAGGTAAAACCAATTAGAGCTTCTAGGCTTCATGCACCAGTATTTGAAACTTACTGGTCAATGTTTATATACAACCTTTTTTACTGT
TAATCTAAATTCTAAAACACAGAAATGCAGGCGCTTGTGAGCCTCCACCACAGAAACCTCAAATTGGTGCTTCTGCTTCAAGAGCTGTAAAAGGAAACCTTGTTCGATTAGAAACCAAAG
CAAACGTTAATGTTTCTGTAGAAGAAGCGCAAGCAATGTAAGCATAAAAACAAGCCTAAACTATCCATTGTGTATTTTTGCATATCTTTCTCTTTAAGTTATGGTCTTGGCTTTGTCTTA
TTCCAGATATACCCTACAATAATCATCAAAGGACCATATGGAGCTCCGGCTCAAGATTACAGAAAATATGACATCCTATTACTTATTGGTTTGGGTATTGGAGCAACCCCCTTCATTAGC
ATTTTGAAAGATCTCTTAAACCACCAAAGGGAAGCAGTAAGTAGTACTTCTTTTATACCATGTTACCTTATAAAGGGTTGTGCTAAAGGTACCCCACCCTCCTCTCGTTTTACTTATTGC
ACCCTTAAACTTGACACATCAGTAAATTTTTCCCTTTTCACACTATAAAACAAAAAATTATTGATCTGATGTTTTCAGAGGGGGTATGATGAAAACTTAGGAGGGGTGAGATACGTTTAG
CCAACCCCTTCGTAAAACGAGTTATGCTAATCATATTCTCATAGGCGCGTATGATGGAAAAGTTCCGGAACGCGCCTACTTCTATTGGGTGACAAGGGAACAAGGATCATTTGAGTGGTT
CAAAGGTGTTATGGATGATATTGCTGAGTATGACAAAGAGGTAGGTTCAATTCTGGTGAACAAAACAAATGCATTATTTCATTGCTACACAAAGGAGTATCGACATATTACCCAAAAGAT
ACATGTCAGTATTTTTTTTATAAAACAGTCCACACCCCCTCTAATCTTACCCTAATTCTACACCAATATCCAATATGAGACTCAAACCCTCAACCTGATAGAGAGGAACACCACTTTACA
CACGTTGATAACAGGGATCTCTAACGAAAAAAAACAGTCACACATAAAAATGTTACAAATATAAATTAAATTAAATGGTCAGTAATCACCGACAGATTACCTACAAAATTTCTACCCGTT
AAAACCGACAGTTATCGACGAATACAGTTTCATCATTTTTGGAGGGAACGGTAGTCCGTCCGTGATACATTTTGTAGTGTTTTCATGTGTGAAGCAAAAAAGTATTGTTATAATGGGTAT
TTTGAATGTGAATTGCAGCACACATAATCGAAATGCATACCTACTTGACATGTGTTCATGAAGAAGGTGATGCACGATCTGCGCTCATTGCCATGGTGCAGTCTCTACAACATGCCAAAA
ACGGGGTGGATGTTGTCTCCCAAAGTCGTGTATGTTTTCTTGAAACTGTTATCCCGTATTGTTCTTTACTTCCTAGAGAATTCTGTTTCTAATGAGTAAATCATAACAGATATAAGAACA
CATTTTTCAAGACCTAACTGGAAGAGGGTATTCTCCACTTTGGCAACCAACCATGATTCTGCTAGAATTGGTAATTAGCCACCTTATTTCATAATCTAATATCTACTATCTGTTTTGATA
ATTTGTGATATTCTATGGATACCTTTTGATCGTTGTTGACTTACAGGTGTGTGTTCTATTGTGGGAGCCAAACGCTCGTCAAATCACTAGAAAGTATTGCCAAAGAATTTTCCGTAGAAA
CTTCAACTCGCTTTGAATTCCACAAAGAGAACTTCTAA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA

cDNA►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

TTTCTCATTA ACATCATATT CTCCATCCTT ACTTCCTTCC TTCCTTCCCA TTTTCTGAAA CCAAAACAAA ATATTTTTCA CTTTTATGGT AGGAAAGTAA ACTTGAAACA CGATGAAAGG GGCTGATCTT GAAAGCGTTC AGATCGACCC AATAGATGGC CGTAAGCCTG CCGGGTTGCC ACCGATGTTA AGCCGCACCT CTAGTAAGGC AACATCTGTT CAAAAGGGAC CGCCACCTTC TGGTGGAGGG GCGCCAAAAA TGGGCCGCAC AACATCAACG GCTGCCAAAG GGCTTAATAG CTTACGGTTT CTTGATAGAA CCGTGACCGG AAAAGAAGGG GATGCATGGA GGTCGATTGA GAGACGTTTT AATCAATTTG CTGTCGCGGG AAAGCTACCT AAAGACAAAT TTGGAATCTG CCTTGGAATG GGAGATAGCA TCGAATTCGC AGGGGAGTTG TATGATGCAA TGGCTAGGCG TAGGAATATA GATGGTGAAG AAGGGCTCAC TAAAGAACAA GTTAGAGATT TTTGGGAAGA GATGACAAAG AAAGACCTTG ATGCTCGGCT TAGTATCTTT TTCGACATGT GTGACAAGAA TGGGGATGGG ATATTATCAG AGGAAGAGGT AAAAGAGGTA CTTATAATGA GCGCTTCGGC GAACAAGCTT TCGAATTTCA AGAACCAAGC CGGGACATAT GCAGCTCTAA TCATGGATGA ACTAGACCCT GACCATCGTG GTTACATAGA GATGTGGCAA CTCGAAATCC TGCTAACAGG CATGGTATTG AAGGATAATG GCAAGCCAAA CCAGAAATCA GAGAATACTA AAAAGAATCA AGATACAACG AATCTAGCAA TGTCTATGAT CCCACAAAGC TATCGCCACC CAACTAGAAG ATTCATAAAT GAAGGGATAG AACTTGTACA AGACAACTGG AAAAGATTTT GGGTAGTAAC CATATTCCTC GTGCTTAACT TCTTACTTTT TGAATGGAAA TTTCTTCAGT ATAGCAAACT GCCAACATTT GAAGTAATGG GTTATTGTGT ATGCGTAGCC AAGGCTGCGG GTGAGACCCT AAAGCTTAAC ATGGCTCTAA TTCTCCTTCC GGTTTGTAGA AAAACACTCA CAGGCTTACG AGAAACATGG TTAGGGAAAC TTTTACCTTT TGATGATAAC ATCAACTTCC ATAAACTTAT CTCCGTCGCC ATTGTGATTG GAGTTATAGC CCATACTGTA GCACACATGG GCTGCAACTT TATAAGGATT AGCACTTGCC CCCCAGCCAC TTTTCAACGT GTTTATGGAA ATTTGCTCCC AGCGCAACCA TCGTACAAGG ATCTAATGTT AACAATCCCA GGTGTTACGG GTGTGATCAT GGACGTAATG ATGTTCTTTT GTTTTCTACT CGCGACGCAT GCTTTTAGAA GAAATGTCAT AAATTTACCA TGGCCGTTTA ATAATTTAGC CGGTTTTACC TCCTTTTGGT ATGCCCATCA TCTTCTGATT ATCGTTTACA TCTTGTTGAT CCTGCATGGG TACTTCCTCG TGTTCGCCAC TTTTTGGTAC ATGAAAACAA CATGGATGTA TCTTGTGCTC CCAATGTTGT GTTATGCAAG TGAGAGAGTG TTTACAGCCT CTGACCATAA CCATCGGGTT AATATCGTTA AGGCTATCAT ATACACTGGA AATGTCCTAG CTCTCTATAT GAGCAAACCT AATGGATTCA AGTACAGGAG CGGGATGTAC CTTTTTGTTA AATGTCCAAA TATATCAGGT TTCGAATGGC ATCCTTTCTC CATAACTTCT GCACCTGGAG ATGATTACTT AAGTGTACAT ATTCGAACTT TAGGAGACTG GACAACAGCC CTTAAAAACG AATTTGCAAA GGCTTGTGAG CCTCCACCAC AGAAACCTCA AATTGGTGCT TCTGCTTCAA GAGCTGTAAA AGGAAACCTT GTTCGATTAG AAACCAAAGC AAACGTTAAT GTTTCTGTAG AAGAAGCGCA AGCAATATAC CCTACAATAA TCATCAAAGG ACCATATGGA GCTCCGGCTC AAGATTACAG AAAATATGAC ATCCTATTAC TTATTGGTTT GGGTATTGGA GCAACCCCCT TCATTAGCAT TTTGAAAGAT CTCTTAAACC ACCAAAGGGA AGCAGCGTAT GATGGAAAAG TTCCGGAACG CGCCTACTTC TATTGGGTGA CAAGGGAACA AGGATCATTT GAGTGGTTCA AAGGTGTTAT GGATGATATT GCTGAGTATG ACAAAGAGCA CATAATCGAA ATGCATACCT ACTTGACATG TGTTCATGAA GAAGGTGATG CACGATCTGC GCTCATTGCC ATGGTGCAGT CTCTACAACA TGCCAAAAAC GGGGTGGATG TTGTCTCCCA AAGTCGTATA AGAACACATT TTTCAAGACC TAACTGGAAG AGGGTATTCT CCACTTTGGC AACCAACCAT GATTCTGCTA GAATTGGTGT GTTCTATTGT GGGAGCCAAA CGCTCGTCAA ATCACTAGAA AGTATTGCCA AAGAATTTTC CGTAGAAACT TCAACTCGCT TTGAATTCCA CAAAGAGAAC TTCTAATAAT CCAATGTACT TAAAAAGTTT TGGTTACGAG AAATCAACTT GTACATCTAG AAGTCCTTGG TTAGGGTTTG GAATCTTGAT TGAAGTTCCA ACGCTTGTGA TATCGGGCGT GTTTGTATGT TCGTATTTAT GATCATCTGC AATAGGAATA CCTAGTGTTG ATAGAAAAGG ATAGTTTTAA TTCATACTTT TATTGATATC GTTTTAGTGA AACGCAAAAC GGGTTTGGGT TTGTTTTAGT TAATAGTTAA TTGGTCAAGA CTTATATTAT GTTTATTATT
AATAAAACTC TATGTGGATC GAT

Retrieve as FASTA