Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
250 |
| PWM (Da): |
27549.94 |
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| PI (pH): |
5.62 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MGAKIYPEVS EEYKVAVEKC KRKLRGFIAE KNCSPLMVRL AWHSAGTFDH KTKTGGPYGT MKNAEELAHG ANAGLNIAVN LLEPIYQQFP ILSYADFVQL AGVVAVEITG GPTIDFHPGR
QDKKESPPEG RLPDATKGPS HLRDIFYAYG LTDKEIVALS GAHTLGRAHK ERSGFDGPWT SNPLIFDNSY FTELLTGEKE GLLQLPSDKA LLEDPKFREF VELYAKDEDA FFADYAEAHQ
KLSELGFAEE
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Retrieve as FASTA
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| Remarks |
Complete sequence genomic and from RNA seq. 1 kP : HWO-2002266 and IHWO-2002265 (Marchantia_paleacea-mycorrizal), HMHL-2004001 and HMHL-2004002 (Marchantia_paleacea-non_mycorrizal)). RNA seq (isotig06446 to isotig064555). |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGGTGCCA AGATATACCC CGAGGTGAGC GAGGAGTACA AGGTCGCCGT CGAGAAGTGT AAGAGAAAGT TGAGGGGCTT CATTGCAGAG AAGAACTGTT CACCTCTGAT GGTTCGATTG
GCATGGCACT CTGCTGGAAC TTTTGACCAC AAGACCAAGA CCGGAGGTCC ATACGGAACC ATGAAGAATG CCGAAGAGTT GGCCCATGGA GCTAACGCAG GTCTGAACAT CGCCGTCAAC
CTGCTCGAGC CTATCTACCA ACAATTCCCC ATCCTCTCGT ACGCCGACTT CGTCCAGCTC GCCGGAGTCG TTGCCGTCGA AATCACTGGA GGACCAACCA TCGACTTCCA CCCCGGTCGT
CAGGACAAGA AGGAATCTCC CCCAGAAGGC AGACTTCCCG ACGCCACCAA GGGCCCAAGC CACTTGCGCG ACATTTTCTA CGCCTATGGA TTGACCGACA AGGAGATCGT TGCACTTTCT
GGTGCTCACA CCTTGGGACG CGCCCACAAG GAACGCTCTG GATTCGATGG ACCCTGGACT TCCAACCCAC TCATCTTCGA CAACTCCTAC TTCACTGAAT TGCTGACCGG AGAGAAGGAA
GGACTTTTGC AGCTGCCTTC AGATAAGGCT CTTCTTGAGG ATCCCAAGTT CCGAGAGTTC GTTGAGTTGT ATGCAAAGGA CGAGGACGCA TTCTTCGCTG ACTACGCTGA AGCGCACCAA
AAGCTTTCTG AGCTAGGATT CGCTGAGGAG TAG
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGGTGCCA AGATATACCC CGAGGTGAGC GAGGAGTACA AGGTCGCCGT CGAGAAGTGT AAGAGAAAGT TGAGGGGCTT CATTGCAGAG AAGAACTGTT CACCTCTGAT GGTTCGATTG
GCATGGCACT CTGCTGGAAC TTTTGACCAC AAGACCAAGA CCGGAGGTCC ATACGGAACC ATGAAGAATG CCGAAGAGTT GGCCCATGGA GCTAACGCAG GTCTGAACAT CGCCGTCAAC
CTGCTCGAGC CTATCTACCA ACAATTCCCC ATCCTCTCGT ACGCCGACTT CGTCCAGCTC GCCGGAGTCG TTGCCGTCGA AATCACTGGA GGACCAACCA TCGACTTCCA CCCCGGTCGT
CAGGACAAGA AGGAATCTCC CCCAGAAGGC AGACTTCCCG ACGCCACCAA GGGCCCAAGC CACTTGCGCG ACATTTTCTA CGCCTATGGA TTGACCGACA AGGAGATCGT TGCACTTTCT
GGTGCTCACA CCTTGGGACG CGCCCACAAG GAACGCTCTG GATTCGATGG ACCCTGGACT TCCAACCCAC TCATCTTCGA CAACTCCTAC TTCACTGAAT TGCTGACCGG AGAGAAGGAA
GGACTTTTGC AGCTGCCTTC AGATAAGGCT CTTCTTGAGG ATCCCAAGTT CCGAGAGTTC GTTGAGTTGT ATGCAAAGGA CGAGGACGCA TTCTTCGCTG ACTACGCTGA AGCGCACCAA
AAGCTTTCTG AGCTAGGATT CGCTGAGGAG TAG
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Retrieve as FASTA
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cDNA►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
AGTCTTGCCC TCTCGTCTCT CCGTCACTGC GTCCTCGTTT GACTCTTCTT CCCCGTTGAG GTTAAAATCG CACATTCTCT CGTGCTATTG GAAACTCGTT CCGTCATCCT GTGTAAAGCT
GATAGTTGAA AGTCTATTGG AAACCCTTGC TCATCAGATC AATCATCAGT AGAGGTTTTC TCAGCTCTGA AGATCAGCCG TCTCGCCTGT CTGTCAACAT GGGTGCCAAG ATATACCCCG
AGGTGAGCGA GGAGTACAAG GTCGCCGTCG AGAAGTGTAA GAGAAAGTTG AGGGGCTTCA TTGCAGAGAA GAACTGTTCA CCTCTGATGG TTCGATTGGC ATGGCACTCT GCTGGAACTT
TTGACCACAA GACCAAGACC GGAGGTCCAT ACGGAACCAT GAAGAATGCC GAAGAGTTGG CCCATGGAGC TAACGCAGGT CTGAACATCG CCGTCAACCT GCTCGAGCCT ATCTACCAAC
AATTCCCCAT CCTCTCGTAC GCCGACTTCG TCCAGCTCGC CGGAGTCGTT GCCGTCGAAA TCACTGGAGG ACCAACCATC GACTTCCACC CCGGTCGTCA GGACAAGAAG GAATCTCCCC
CAGAAGGCAG ACTTCCCGAC GCCACCAAGG GCCCAAGCCA CTTGCGCGAC ATTTTCTACG CCTATGGATT GACCGACAAG GAGATCGTTG CACTTTCTGG TGCTCACACC TTGGGACGCG
CCCACAAGGA ACGCTCTGGA TTCGATGGAC CCTGGACTTC CAACCCACTC ATCTTCGACA ACTCCTACTT CACTGAATTG CTGACCGGAG AGAAGGAAGG ACTTTTGCAG CTGCCTTCAG
ATAAGGCTCT TCTTGAGGAT CCCAAGTTCC GAGAGTTCGT TGAGTTGTAT GCAAAGGACG AGGACGCATT CTTCGCTGAC TACGCTGAAG CGCACCAAAA GCTTTCTGAG CTAGGATTCG
CTGAGGAGTA GAGAAGTCTG AAAACTTACC GTCGCCCAAC TCAGTTCTTA CGTACACTAC TCCTACAGCT ACCTGTGAGA CCATTCGAGC TCTCCAAGAA CACTCTTGAA ATGAAGTCAT
GGCTTCCGGG TACAGATGAC AGCACGTCAA CTTCACCTGT GATTATCTTC GCCCAGATTC ACATACTTAT ATATTCTTAG AACGACACAC ATTTTTAAGT TGTGCCCGAT TTTCGTGTAG
TCGATGAGGT GTACTGAAAG TCCACGGATG GTTTGAGTAC CTTTTTTGTC CTTCACAGAC TTTCGCCAAT AATACGAAAG CTACTCAGCC GCCGACCTTG GTGTATATGA ATATCTTCGC
ATAAATGTGG TCGTATATTC CTTCCGGACT CTGCATATGT TCGTTGTCGT TGGATTTCCG TTCATCTCTA TGTACGAATA CCCATTTTTT AAGAACGAAA TATGTCAAAG ATCTGGATGG
ATTTAGTTTG CCATCGGTAG ATATACTTCG GAACACGGCG CTTAACTGTA TGAACGGTCA GTTTTATCAC AGTAGATTTG AGGTATGAGT AGAAGCTATG AGGAATAATT ATATTTGCTC
GCTCGCGATG TTACTTGCAT TATAATTTGG ACTGATGGTC TTTTAGATTT GATCTCTAGT CTTGCCCTCT CGTCTCTCCG TCACTGCGTC CTCGTTTGAC TCTTCTTCCC CGTTGAGGTT
AAAATCGCAC ATTCTCTCGT GCTATTGGAA ACTCGTTCCG TCATCCTGTG TAAAGCTGAT AGTTGAAAGT CTATTGGAAA CCCTTGCTCA TCAGATCAAT CATCAGTAGA GGTTTTCTCA
GCTCTGAAGA TCAGCCGTCT CGCCTGTCTG TCAACATGGG TGCCAAGATA TACCCCGAGG TGAGCGAGGA GTACAAGGTC GCCGTCGAGA AGTGTAAGAG AAAGTTGAGG GGCTTCATTG
CAGAGAAGAA CTGTTCACCT CTGATGGTTC GATTGGCATG GCACTCTGCT GGAACTTTTG ACCACAAGAC CAAGACCGGA GGTCCATACG GAACCATGAA GAATGCCGAA GAGTTGGCCC
ATGGAGCTAA CGCAGGTCTG AACATCGCCG TCAACCTGCT CGAGCCTATC TACCAACAAT TCCCCATCCT CTCGTACGCC GACTTCGTCC AGCTCGCCGG AGTCGTTGCC GTCGAAATCA
CTGGAGGACC AACCATCGAC TTCCACCCCG GTCGTCAGGA CAAGAAGGAA TCTCCCCCAG AAGGCAGACT TCCCGACGCC ACCAAGGGCC CAAGCCACTT GCGCGACATT TTCTACGCCT
ATGGATTGAC CGACAAGGAG ATCGTTGCAC TTTCTGGTGC TCACACCTTG GGACGCGCCC ACAAGGAACG CTCTGGATTC GATGGACCCT GGACTTCCAA CCCACTCATC TTCGACAACT
CCTACTTCAC TGAATTGCTG ACCGGAGAGA AGGAAGGACT TTTGCAGCTG CCTTCAGATA AGGCTCTTCT TGAGGATCCC AAGTTCCGAG AGTTCGTTGA GTTGTATGCA AAGGACGAGG
ACGCATTCTT CGCTGACTAC GCTGAAGCGC ACCAAAAGCT TTCTGAGCTA GGATTCGCTG AGGAGTAGAG AAGTCTGAAA ACTTACCGTC GCCCAACTCA GTTCTTACGT ACACTACTCC
TACAGCTACC TGTGAGACCA TTCGAGCTCT CCAAGAACAC TCTTGAAATG AAGTCATGGC TTCCGGGTAC AGATGACAGC ACGTCAACTT CACCTGTGAT TATCTTCGCC CAGATTCACA
TACTTATATA TTCTTAGAAC GACACACATT TTTAAGTTGT GCCCGATTTT CGTGTAGTCG ATGAGGTGTA CTGAAAGTCC ACGGATGGTT TGAGTACCTT TTTTGTCCTT CACAGACTTT
CGCCAATAAT ACGAAAGCTA CTCAGCCGCC GACCTTGGTG TATATGAATA TCTTCGCATA AATGTGGTCG TATATTCCTT CCGGACTCTG CATATGTTCG TTGTCGTTGG ATTTCCGTTC
ATCTCTATGT ACGAATACCC ATTTTTTAAG AACGAAATAT GTCAAAGATC TGGATGGATT TAGTTTGCCA TCGGTAGATA TACTTCGGAA CACGGCGCTT AACTGTATGA ACGGTCAGTT
TTATCACAGT AGATTTGAGG TATGAGTAGA AGCTATGAGG AATAATTATA TTTGCTCGCT CGCGATGTTA CTTGCATTAT AATTTGGACT GATGGTCTTT TAGATTTGAT CTCT
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Retrieve as FASTA
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