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Entry information : PpaMDAR01 (Pp3c15_710)
Entry ID 13922
Creation 2016-10-18 (Christophe Dunand)
Last sequence changes 2016-10-18 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2016-10-18 (Christophe Dunand)
Peroxidase information: PpaMDAR01 (Pp3c15_710)
Name (synonym) PpaMDAR01 (Pp3c15_710)
Class Monodhydroascorbate Reductase    [Orthogroup: MDAR001]
Taxonomy Eukaryota Viridiplantae Streptophyta Funariaceae Physcomitrella
Organism Physcomitrella patens    [TaxId: 3218 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PpaMDAR01
start..stop		 S start..stop
PpaMDAR02 754 0 1..434 22..456
PpaMDAR03 624 0 22..434 22..435
HaMDAR03 603 0 7..433 8..435
LeMDAR03 594 0 1..434 1..434
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '13922' 'complement(join(449869..450189,450327..450467,450922..451047,451286..451404,451588..451807,451996..452114,452237..452317,452753..452804,453132..453203,453443..453493))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 453443..453493 49 N° 2 453132..453203 70 N° 3 452753..452804 50 N° 4 452237..452317 79
N° 5 451996..452114 117 N° 6 451588..451807 218 N° 7 451286..451404 117 N° 8 450922..451047 124
N° 9 450327..450467 139 N° 10 449869..450189 319  
complement(join(449869..450189,450327..450467,450922..451047,451286..451404,4515 88..451807,451996..452114,452237..452317,452753..452804,453132..453203,453443..4 53493))


exon

Literature and cross-references PpaMDAR01 (Pp3c15_710)
DNA ref. GenBank:   NW_001865467.1 (453493..449869)
Cluster/Prediction ref. Genebank:   5939996
Protein sequence: PpaMDAR01 (Pp3c15_710)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   433
PWM (Da):   %s   46907.92 Transmb domain:   %s   o258-280i
PI (pH):   %s   5.38
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MATIDRKYIVVGGGVAGGYAAREFVKLGLQPGELTIFSKEAAAPYERPALSKAYMFPEAAARLPGFHVCVGSGGERQLPDWYAEKGIELKLESEIVKADLENKTLTTDKGDVYSYGTLVI
ATGSTFLNLADFKTAGADAKGIYYLREVHEADKLVDAIKANKGGEAVVVGGGYIGLELAACLTINKIKVTMVFPDPCFMPRLFTPELASFYEGYYENKGVNIIKGTSVTAFEKDDNGHVS
KVILKDGRTLDSTLVVVGVGAKPLLGPFKGLLEEEKGGIKVDASFKTSDPNVYAVGDIATFPMKMYGDTRRVEHVDHARKSAMQAVQAIKAAEKGEVVDEYDYLPFFYSRSFDLSWQFYG
DNVGETVHWGREAGTPDSKFGAYWVKDNRVMGAFLEGGSPDENKLIAKVAREQPSVNSTQDLVSAGLGFASKV*

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 15, 9 introns)
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTACAATTGATCGCAAATACATTGTGGTGGGAGGAGGTGTAGCCGGGGTAAGGTTTGAGATGTTTTTCATAGGGTTGCTAGTGTGGCATTGAAATGATCTATTTGGATTGCATCGA
GGCTGGTACTGTGGTGCAGTGTTGAGCAAGTTCTAGATGATTGCACAAGAGGTTCACTGCCACAGAGGATATATGAACACTGCATCAAATTCATGATTAAAAACCGGTAGGATTTTTAAC
TTACAGTGTGTGAAGTGCAGAAACTGAGACGGTGTTTGCAATGTGTGCAGGGGGCTACGCTGCACGAGAGTTTGTCAAATTGGGCTTGCAACCTGGAGAATTGACCATTTTCTCCAAAGA
AGCGGTAAATTGCTTCTGCCTTAATGATCGTAACTTATTAACGGTGGTTGTTTTGGTTTATTATGTCAAAGACTTACTTGGTTAAGACAAATATTATTTCTCTAGTTGTTGTTTGGTATA
TATCTATGAATATTTTTTTCTTGTTAGCCTCATGCTAGGACGATCGATTCAAGTAGTATAAGTGCGGAATGTTCGATTCTCCATATTTCAGACAAGGCTTTCTGATTTCTCCGCAAGAAT
GTCGCGTCTTTGAGTCAGATGAGGTGTTGCTTTGCAGTGTAGAGCACAGAAAATTGTCGAGTGACTGACTTGATTAAAATCGGAATGTCAGGCGCGGCACCTTATGAGCGACCCGCCTTG
AGCAAAGCTTACATGTTCCCTGAGGGTAAGTTTTCAGAACATCAATTCTGTTCTCGCATATTCTCCAGATATGCGGACGCATCTGGATCTGAGCAGTTTCGCATCTTTCAAGTCTTACTC
ACTGTTCTATAGACTTTGCCTCGCTCTAGAAAAGCATCTTAAACCACACTGTAGTATTTTAGGTTGACTGTTGGATAATATATGAGCTACTGCAGTACTGCTTTCCACTACTGTCTCTAA
CTAGTGTTCGCAGGAATTTGGTTGGTCAGTACAATGTGTCCATGTCTCCTCATACCATCTGTGGGGGTATTTGTTTCAGCGGCAAGTGATGAGCTGCTGTGTGAACAGCACCTCAATATA
CGGAGTTGAAGTAGCAATTATGTTTTTAAACACGATCTTACTTTATTTTTTTAATGAGGTGATGGATTGGTTGATTTATTTATTTGTTCTTCTGTGACAGCTCTGCTGCTAGGCTTCCAG
GCTTCCATGTCTGTGTAGGAAGCGGTGGAGAGAGACAGTTACCGGACTGGTATGCCGAAAAAGGTATACTTTTCCAACCGTACACTGTGATTGTGAAGTTCATCATTATTGTTTGCCACG
ATGCAGGAAAGCTTGAACCCTACTGGTAGTTTTTAACACGAAGTAACATGCATTTCGACTGTCAGGTGTATTGAACTGAAACTGGAGTCTGAGATTGTGAAGGCCGACCTAGAGAACAAG
ACTCTGACGACAGATAAGGGAGATGTCTACAGTTATGGAACTCTGGTTATTGCCACAGGCTCTACGGTGGGTGTGCTGCTGTTTCTTATCGTAAAAAGCTTTACGCTGAAGTAGATTTTG
TATTAAAGCTTTTTTATCGCCTTAAGTTTCTGTTATTTAATAGCATTGCCTACTTTTGTAGAGTAAAGAGTTTGACGACGAAACTAGTGTCTAATTTGAATAATCAAAGCTCTAAGTAAT
AACTTTTCTTGCAGTTTTCCTTAACCTTGCTGACTTCAAAACTGCTGGAGCCGACGCTAAAGGTATTTACTACCTGAGAGAGGTGCATGAAGCTGATAAGCTTGTTGACGCCATTAAAGC
CAACAAGGGAGGTGAAGCAGTGGTTGTCGGTGGAGGTTACATTGGGCTGGAATTAGCTGCATGCCTGACAATCAATAAGATTAAAGTCACAATGGTGTTCCCAGACCCATGCTTCAGTAA
GAGTTTTACCATACCTGGTCAATAGGTCGTATGCGATGGGCTCTATGTATGAAGTGAACGTTTCGAAGAAACCAGTTCTCCCGCAGACTGGAATGCGTGGGAATGATGATGAAATCCGTA
ATAAGAAGGTTTACGCACAATATCTGCTAAATTTTTCCGGCCTTGTAATTTGATTGCAGTGTGCCTCGTTTGTTTACACCCGAGCTTGCCTCCTTCTATGAGGGTTATTACGAGAATAAG
GGTGTGAACATCATCAAGGGAACGTCTGTGACTGCTTTTGAGAAAGATGATAATGGCCATGTAAGATCCTGATCCTTGAAGCTGCAAATGATAGTTATCGGTGTTAGGAAAGCTTAGAAA
GTAGGAGTGACGTAATATTTCTGTTAGGATCTGTAACCTCAGTACACCATGGGCCACAACACATTGCATTGGCAGATCTTACGTAGATGCACTAACATAGTGGTTTGGATAGTGCAGCTT
CATTCTCTGGTTTTCCCTTGATTCTATATGTTTTGATATATTAGAACGGCTGATGCAGGTGTATCGAAAGTAATTCTGAAAGATGGAAGAACGTTGGACAGCACTCTCGTGGTTGTGGGA
GTTGGTGCAAAACCACTTTTGGGTCCTTTTAAGGGTTTGTTGGAGGAGGAGAAGGGTGGTATTAAGGTTTGTGTTTTCTGCTCTATAACGTAATAAGTGGTTGATATACACGCTAATGTT
TATTCATTGGCGCAATTTCTGTTGTGCTGGTTTATCTTGTTACCTAGCCAGTAGATGAATCAGGTGGGATGCCAAGAAAGTGAGAATGGTAACTGTCTTGTTAGCATGAAGAGGATTTGT
GAATCTATATAGAGAAAATCATTCTTAGAAATAAATCACAATTTCATCTGAAAATTATGCATGGTGAAAATAAGATCGTCGTAGATGGTTTGATAATATCGAAACTATTCGAATTCTTAT
TCAAAGATAAACTTCGGCAAACAAGTAAATAGCCTTAGTTCTGAGTGTAAAACCCTGTCTCTATGGCACAGAAAGTGGGAATAGAAGGCACTCTTTCCAACGATTCTTTGTTTGTGAATT
TTTTTGAAAGCCTACTTACTTTTGAATGATTGTTTTTCAGGTGTTGATGCCTCATTCAAGACAAGTGACCCCAACGTGTACGCTGTAGGTGATATTGCGACGTTCCCAATGAAGATGTAC
GGCGACACTCGGCGAGTGGAGCATGTGGATCATGCAAGGAAGTCGGCCATGCAGGCTGTGCAGGTATGTAGTGCTCTATGCTTATATCTGAATTGAATCAGTAAATCACTACGTGCCTTC
TTTATGACACCTTGGGTATGCTTTGCACTTAATTTACTGGAAAGTCCTAATACATTGTTCTGCAAACTGATTGTGAACAGGCGCTATCAAAGCTGCAGAGAAGGGCGAAGTCGTGGACGA
GTACGATTACCTGCCTTTCTTCTACTCTCGCTCCTTCGATCTGTCGTGGCAGTTTTATGGCGACAATGTGGGTGAAACTGTGCATTGGGGCCGAGAGGCTGGAACACCTGACTCAAAGTT
TGGTGCTTACTGGGTTAAGGACAACAGGGTAATGGGCGCCTTTTTGGAGGGTGGTTCACCTGATGAAAACAAGTTAATTGCCAAAGTTGCCCGAGAACAACCGTCTGTGAATTCTACACA
GGATTTAGTATCTGCTGGATTAGGCTTCGCATCCAAGGTATAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTACAATTGATCGCAAATACATTGTGGTGGGAGGAGGTGTAGCCGGGGGCTACGCTGCACGAGAGTTTGTCAAATTGGGCTTGCAACCTGGAGAATTGACCATTTTCTCCAAAGAA
GCGGCGGCACCTTATGAGCGACCCGCCTTGAGCAAAGCTTACATGTTCCCTGAGGCTGCTGCTAGGCTTCCAGGCTTCCATGTCTGTGTAGGAAGCGGTGGAGAGAGACAGTTACCGGAC
TGGTATGCCGAAAAAGGTATTGAACTGAAACTGGAGTCTGAGATTGTGAAGGCCGACCTAGAGAACAAGACTCTGACGACAGATAAGGGAGATGTCTACAGTTATGGAACTCTGGTTATT
GCCACAGGCTCTACGTTCCTTAACCTTGCTGACTTCAAAACTGCTGGAGCCGACGCTAAAGGTATTTACTACCTGAGAGAGGTGCATGAAGCTGATAAGCTTGTTGACGCCATTAAAGCC
AACAAGGGAGGTGAAGCAGTGGTTGTCGGTGGAGGTTACATTGGGCTGGAATTAGCTGCATGCCTGACAATCAATAAGATTAAAGTCACAATGGTGTTCCCAGACCCATGCTTCATGCCT
CGTTTGTTTACACCCGAGCTTGCCTCCTTCTATGAGGGTTATTACGAGAATAAGGGTGTGAACATCATCAAGGGAACGTCTGTGACTGCTTTTGAGAAAGATGATAATGGCCATGTATCG
AAAGTAATTCTGAAAGATGGAAGAACGTTGGACAGCACTCTCGTGGTTGTGGGAGTTGGTGCAAAACCACTTTTGGGTCCTTTTAAGGGTTTGTTGGAGGAGGAGAAGGGTGGTATTAAG
GTTGATGCCTCATTCAAGACAAGTGACCCCAACGTGTACGCTGTAGGTGATATTGCGACGTTCCCAATGAAGATGTACGGCGACACTCGGCGAGTGGAGCATGTGGATCATGCAAGGAAG
TCGGCCATGCAGGCTGTGCAGGCTATCAAAGCTGCAGAGAAGGGCGAAGTCGTGGACGAGTACGATTACCTGCCTTTCTTCTACTCTCGCTCCTTCGATCTGTCGTGGCAGTTTTATGGC
GACAATGTGGGTGAAACTGTGCATTGGGGCCGAGAGGCTGGAACACCTGACTCAAAGTTTGGTGCTTACTGGGTTAAGGACAACAGGGTAATGGGCGCCTTTTTGGAGGGTGGTTCACCT
GATGAAAACAAGTTAATTGCCAAAGTTGCCCGAGAACAACCGTCTGTGAATTCTACACAGGATTTAGTATCTGCTGGATTAGGCTTCGCATCCAAGGTATAA

Retrieve as FASTA