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Entry information : CbraCPF02 (g37568/CHBRA474g00210)
Entry ID 13987
Creation 2016-10-25 (Christophe Dunand)
Last sequence changes 2016-10-25 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2016-10-25 (Christophe Dunand)
Peroxidase information: CbraCPF02 (g37568/CHBRA474g00210)
Name (synonym) CbraCPF02 (g37568/CHBRA474g00210)
Class CPF Grx    [Orthogroup: CPF002]
Taxonomy Eukaryota Viridiplantae Streptophyta Charophyceae Characeae Chara
Organism Chara braunii    [TaxId: 69332 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CbraCPF02
start..stop		 S start..stop
HaCPF01 350 1.77e-118 219..489 60..329
MpalCPF02 318 9.54e-106 170..489 28..351
MpCPF02 317 5.8e-105 224..491 86..353
EsilCPF02 298 2.4e-98 234..489 63..322
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '13987' 'join(962192..963694)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 962192..963694 1501  
join(962192..963694)


exon

Literature and cross-references CbraCPF02 (g37568/CHBRA474g00210)
Protein sequence: CbraCPF02 (g37568/CHBRA474g00210)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   500
PWM (Da):   %s   53467.79  
PI (pH):   %s   8.91
Sequence
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MAAMATMTGA TMATNATTNL VTRVTTSALA DDTSAGQSLS FAQQRSADTR TQTTAQRGDV VRASGSAKRH RCSLVIATSL LGMSLSSSTS RPRGSRSSSS SSSSSSSLSS YNQSASSSPS  NGYGDGEGGG VRIGKWVRVS RQESCLTSTR AKASDHHRRH HRRAGHVSPC RAMADDSEAK TDSTATATLG LASDSEPDLK SAPGSASAGD TNAEPVAEPE LGLFRPREDV ATDIAVLTLA  PLLRLGGGIF VNGYSYSVVP ESEAPENLYG LTIGGRKILE SSKPGRLPEK PIVLYEFEGC PFCRKVREAV TILDLDVLFY PCPSGGPTFR PIAKALGGKS QFPYMVDPNT NVSMYESDEI  IKYLFTTYGD GQVPTILRLG LLTTLTCGLA AAGIRGMRGS RYTPARMPEK PLELWGYESS MFSRLVREVL GELELPHIFH SMGRGSPKRQ AFYEKFGRFQ VPYLEDPNTG VKRFESAYIV 
DYLRSTYALP STASAGAASK * 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no introns). Longer 5'end confirmed with RNA seq.
DNA ►
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ATGGCGGCGA TGGCGACGAT GACGGGGGCG ACGATGGCGA CGAATGCGAC AACGAATCTA GTGACACGTG TCACTACGTC GGCGCTCGCG GACGACACGT CAGCGGGCCA ATCCCTGTCA  TTCGCGCAGC AGAGGAGCGC TGACACGCGG ACGCAAACTA CTGCGCAGCG CGGAGATGTG GTCCGTGCCT CAGGCTCGGC AAAACGACAT CGCTGCTCTC TTGTCATCGC CACATCACTG  CTTGGTATGT CATTGTCCTC TTCGACAAGT CGGCCACGTG GCAGCAGATC ATCCTCATCA TCCTCATCAT CCTCATCATC ACTGTCATCT TACAATCAAT CAGCCTCATC ATCACCTTCT  AATGGTTATG GCGATGGAGA AGGAGGTGGT GTGCGGATTG GCAAGTGGGT GCGAGTCTCG CGGCAGGAAA GCTGTTTGAC GTCGACGAGA GCGAAGGCCA GCGATCACCA TCGCCGTCAT  CATCGTCGCG CAGGACACGT GTCACCATGC CGAGCGATGG CAGACGACAG TGAGGCCAAG ACCGACTCCA CCGCCACTGC AACCTTAGGA CTAGCTTCCG ATTCCGAACC TGATCTGAAA  TCGGCACCAG GTTCGGCGTC AGCTGGTGAC ACCAATGCCG AACCTGTCGC CGAGCCGGAG TTGGGCCTAT TCAGGCCGCG GGAAGACGTG GCAACAGATA TAGCAGTTTT AACACTGGCA  CCCCTGTTGA GATTGGGCGG GGGAATTTTT GTCAATGGGT ACAGCTACTC TGTGGTACCC GAGTCCGAGG CCCCCGAGAA CTTGTACGGC CTGACGATAG GGGGTAGAAA AATATTGGAA  AGCAGTAAAC CGGGTCGTCT TCCGGAGAAG CCTATTGTGC TGTACGAATT CGAGGGGTGC CCATTTTGTC GCAAGGTCCG AGAAGCGGTC ACGATCTTGG ATCTCGATGT GTTGTTTTAC  CCCTGTCCAT CTGGAGGGCC CACGTTTCGA CCCATCGCAA AGGCCCTTGG GGGGAAGAGT CAGTTCCCCT ACATGGTTGA CCCCAATACC AACGTGTCGA TGTACGAATC CGACGAAATA  ATCAAGTACT TGTTCACGAC GTACGGCGAC GGACAGGTCC CGACGATTCT CCGACTCGGC CTGCTTACCA CGCTGACCTG TGGTCTGGCC GCTGCCGGGA TACGTGGCAT GAGGGGATCC  CGATACACCC CTGCTAGGAT GCCTGAGAAG CCGCTAGAAC TGTGGGGGTA CGAGTCGTCG ATGTTTTCCA GGCTGGTCAG AGAGGTCCTT GGCGAACTCG AGCTGCCGCA TATCTTCCAC  AGCATGGGCC GCGGCAGCCC CAAACGACAA GCATTTTATG AAAAATTCGG TCGGTTTCAG GTCCCGTACC TTGAGGATCC CAACACCGGA GTCAAGAGGT TTGAAAGTGC TTACATAGTA 
GATTACCTGA GGTCAACCTA CGCCCTGCCA TCCACGGCAT CAGCAGGGGC AGCCAGCAAG TAG 

Retrieve as FASTA  
CDS►
Send to BLAST
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ATGGCGGCGA TGGCGACGAT GACGGGGGCG ACGATGGCGA CGAATGCGAC AACGAATCTA GTGACACGTG TCACTACGTC GGCGCTCGCG GACGACACGT CAGCGGGCCA ATCCCTGTCA  TTCGCGCAGC AGAGGAGCGC TGACACGCGG ACGCAAACTA CTGCGCAGCG CGGAGATGTG GTCCGTGCCT CAGGCTCGGC AAAACGACAT CGCTGCTCTC TTGTCATCGC CACATCACTG  CTTGGTATGT CATTGTCCTC TTCGACAAGT CGGCCACGTG GCAGCAGATC ATCCTCATCA TCCTCATCAT CCTCATCATC ACTGTCATCT TACAATCAAT CAGCCTCATC ATCACCTTCT  AATGGTTATG GCGATGGAGA AGGAGGTGGT GTGCGGATTG GCAAGTGGGT GCGAGTCTCG CGGCAGGAAA GCTGTTTGAC GTCGACGAGA GCGAAGGCCA GCGATCACCA TCGCCGTCAT  CATCGTCGCG CAGGACACGT GTCACCATGC CGAGCGATGG CAGACGACAG TGAGGCCAAG ACCGACTCCA CCGCCACTGC AACCTTAGGA CTAGCTTCCG ATTCCGAACC TGATCTGAAA  TCGGCACCAG GTTCGGCGTC AGCTGGTGAC ACCAATGCCG AACCTGTCGC CGAGCCGGAG TTGGGCCTAT TCAGGCCGCG GGAAGACGTG GCAACAGATA TAGCAGTTTT AACACTGGCA  CCCCTGTTGA GATTGGGCGG GGGAATTTTT GTCAATGGGT ACAGCTACTC TGTGGTACCC GAGTCCGAGG CCCCCGAGAA CTTGTACGGC CTGACGATAG GGGGTAGAAA AATATTGGAA  AGCAGTAAAC CGGGTCGTCT TCCGGAGAAG CCTATTGTGC TGTACGAATT CGAGGGGTGC CCATTTTGTC GCAAGGTCCG AGAAGCGGTC ACGATCTTGG ATCTCGATGT GTTGTTTTAC  CCCTGTCCAT CTGGAGGGCC CACGTTTCGA CCCATCGCAA AGGCCCTTGG GGGGAAGAGT CAGTTCCCCT ACATGGTTGA CCCCAATACC AACGTGTCGA TGTACGAATC CGACGAAATA  ATCAAGTACT TGTTCACGAC GTACGGCGAC GGACAGGTCC CGACGATTCT CCGACTCGGC CTGCTTACCA CGCTGACCTG TGGTCTGGCC GCTGCCGGGA TACGTGGCAT GAGGGGATCC  CGATACACCC CTGCTAGGAT GCCTGAGAAG CCGCTAGAAC TGTGGGGGTA CGAGTCGTCG ATGTTTTCCA GGCTGGTCAG AGAGGTCCTT GGCGAACTCG AGCTGCCGCA TATCTTCCAC  AGCATGGGCC GCGGCAGCCC CAAACGACAA GCATTTTATG AAAAATTCGG TCGGTTTCAG GTCCCGTACC TTGAGGATCC CAACACCGGA GTCAAGAGGT TTGAAAGTGC TTACATAGTA 
GATTACCTGA GGTCAACCTA CGCCCTGCCA TCCACGGCAT CAGCAGGGGC AGCCAGCAAG TAG 

Retrieve as FASTA