Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
351 (305) |
| PWM (Da): |
38988.3 (32670.8) |
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| PI (pH): |
7.3 (4.23) |
Peptide Signal: |
cut: 18 range:18-322 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MASRIALLRA ARTSTSVLRR GSILCAAGAH ARALATIPAQ TREQSNVLQY VTAGFAVAAL GAGTASYVHA KEPPKVDYQQ VRKDIEAVLE DYNYDDGSFG PVVVRLAWHC SGTYDKASNK
GGSDGATMRF MPESGHAANR GLDNARLRLE EVAKKHPNIT YADLWTLAGC VAIEEMGGPH IDWRPGRRDK PDASDTPPDG RLPDASKDRN HIREIFYRMG FNDQEIVALC GAHALGRCHP
QNSGYKGPWT NSPTTFSNEY YVQLTTNKWS KKKWNGPLQY EDPTGELMML PTDMELIWDP SFRKWTDLYA ADQDKYFEDF AKAFKKLIEL GVEFKDEPHE KKGFLGSMFG K
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Retrieve as FASTA
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| Remarks |
complete sequence from RNA seq (scaffold-AZZW-2020182-Chlorokybus_atmophyticus) and genomic (Chlatm_Chrsp108S01408, incorrect prediction) |
CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCGTCTC GCATAGCTCT TCTGCGTGCT GCGCGCACAT CAACTTCAGT GTTGCGCCGT GGCAGCATTC TTTGCGCAGC AGGTGCGCAT GCGCGTGCGC TTGCCACCAT TCCAGCGCAG
ACTCGTGAGC AAAGCAATGT GCTGCAGTAT GTGACTGCCG GCTTTGCGGT TGCCGCCTTA GGCGCTGGCA CTGCCTCATA CGTGCATGCC AAGGAGCCGC CGAAAGTTGA CTATCAGCAG
GTCCGAAAGG ACATTGAAGC GGTGCTGGAA GACTACAACT ATGATGATGG CAGCTTTGGG CCTGTTGTTG TTCGCCTGGC ATGGCATTGT TCGGGCACGT ACGACAAGGC TTCAAACAAG
GGTGGCAGCG ACGGCGCAAC CATGCGATTC ATGCCGGAAT CTGGACACGC TGCCAACCGC GGCCTTGACA ATGCACGCCT GCGCCTAGAA GAAGTTGCCA AGAAGCATCC AAACATTACC
TATGCGGACT TGTGGACTCT TGCAGGGTGT GTGGCCATCG AGGAGATGGG AGGCCCGCAC ATTGATTGGA GACCCGGACG TCGTGACAAG CCCGATGCCA GCGATACCCC TCCGGACGGC
CGCCTCCCAG ATGCTTCAAA AGACCGCAAC CACATCCGCG AGATATTTTA CCGCATGGGT TTTAACGATC AGGAGATTGT TGCGCTTTGT GGCGCCCATG CTCTCGGACG CTGCCATCCA
CAGAACAGTG GGTATAAGGG TCCATGGACA AACAGTCCCA CCACTTTCTC AAACGAGTAC TACGTTCAGC TGACCACTAA CAAATGGTCC AAGAAGAAGT GGAACGGACC TCTGCAATAT
GAGGACCCCA CCGGTGAGCT CATGATGCTG CCAACCGACA TGGAGCTCAT TTGGGATCCT TCCTTCCGCA AGTGGACTGA TCTGTACGCT GCAGACCAAG ACAAGTACTT TGAGGACTTT
GCCAAGGCGT TTAAGAAGCT GATTGAGCTT GGTGTGGAGT TCAAGGACGA GCCGCATGAG AAGAAGGGCT TCTTGGGGTC CATGTTTGGC AAATAG
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Retrieve as FASTA
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cDNA►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GAGGTGAGTC AATGCCACTT GTGAAGAACC TCAAGTTTGG CGTGCTGCTT CAGGGCGCTG CTGAGGCAGC ACTATGGCGT CTCGCATAGC TCTTCTGCGT GCTGCGCGCA CATCAACTTC
AGTGTTGCGC CGTGGCAGCA TTCTTTGCGC AGCAGGTGCG CATGCGCGTG CGCTTGCCAC CATTCCAGCG CAGACTCGTG AGCAAAGCAA TGTGCTGCAG TATGTGACTG CCGGCTTTGC
GGTTGCCGCC TTAGGCGCTG GCACTGCCTC ATACGTGCAT GCCAAGGAGC CGCCGAAAGT TGACTATCAG CAGGTCCGAA AGGACATTGA AGCGGTGCTG GAAGACTACA ACTATGATGA
TGGCAGCTTT GGGCCTGTTG TTGTTCGCCT GGCATGGCAT TGTTCGGGCA CGTACGACAA GGCTTCAAAC AAGGGTGGCA GCGACGGCGC AACCATGCGA TTCATGCCGG AATCTGGACA
CGCTGCCAAC CGCGGCCTTG ACAATGCACG CCTGCGCCTA GAAGAAGTTG CCAAGAAGCA TCCAAACATT ACCTATGCGG ACTTGTGGAC TCTTGCAGGG TGTGTGGCCA TCGAGGAGAT
GGGAGGCCCG CACATTGATT GGAGACCCGG ACGTCGTGAC AAGCCCGATG CCAGCGATAC CCCTCCGGAC GGCCGCCTCC CAGATGCTTC AAAAGACCGC AACCACATCC GCGAGATATT
TTACCGCATG GGTTTTAACG ATCAGGAGAT TGTTGCGCTT TGTGGCGCCC ATGCTCTCGG ACGCTGCCAT CCACAGAACA GTGGGTATAA GGGTCCATGG ACAAACAGTC CCACCACTTT
CTCAAACGAG TACTACGTTC AGCTGACCAC TAACAAATGG TCCAAGAAGA AGTGGAACGG ACCTCTGCAA TATGAGGACC CCACCGGTGA GCTCATGATG CTGCCAACCG ACATGGAGCT
CATTTGGGAT CCTTCCTTCC GCAAGTGGAC TGATCTGTAC GCTGCAGACC AAGACAAGTA CTTTGAGGAC TTTGCCAAGG CGTTTAAGAA GCTGATTGAG CTTGGTGTGG AGTTCAAGGA
CGAGCCGCAT GAGAAGAAGG GCTTCTTGGG GTCCATGTTT GGCAAATAGG TAACGAACAC TTTGTGTAAC GTTGTTACAC AGACCGGTCG CCGCCTTGAA GACGGGGAAA ACGCTCGGAG
CAGGCTCACT CAGACATGAT GCCCTTCGGT GTCATGTTTG GCTTGGCCTA ATGCTCTGTT GCCGGCCAAT GGCTGCAGGC CCTTATATAA CGGACATGGT TTGGGCAAGT TGCATAACTT
TGCTCATATG CAGTGCCTAG ACAACAACAA GTGCATAGCA TGGAAGCAGT CAGTTCGTGG GCTATCTGTA TACCACACCA TCAAACTATC AACGTCCATC ACAACTAACG CACATGTGTT
CAAGGGC
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Retrieve as FASTA
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