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Entry information : HaCPF05 (HanXRQChr14g0460801)
Entry ID 14478
Creation 2017-11-03 (Christophe Dunand)
Last sequence changes 2017-11-03 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaCPF05 (HanXRQChr14g0460801)
Name (synonym) HaCPF05 (HanXRQChr14g0460801)
Class CPF Grx     [Orthogroup: CPF002]*
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaCPF05
start..stop		 S start..stop
ThasCPF01 275 2.39e-94 7..193 113..299
AtCPF01 265 3.61e-90 7..189 103..285
ThasCPF04 261 1.57e-89 7..191 50..234
AtCPF04 256 1.34e-87 7..191 51..235
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '14478' 'complement(join(169729839..169729850,169730453..169730533,169730704..169730811,169730995..169731071,169731152..169731254,169731335..169731433,169731889..169731975,169732111..169732128))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 169732111..169732128 16 N° 2 169731889..169731975 85 N° 3 169731335..169731433 97 N° 4 169731152..169731254 101
N° 5 169730995..169731071 75 N° 6 169730704..169730811 106 N° 7 169730453..169730533 79 N° 8 169729839..169729850 10
complement(join(169729839..169729850,169730453..169730533,169730704..169730811,1 69730995..169731071,169731152..169731254,169731335..169731433,169731889..1697319 75,169732111..169732128))


exon

Literature and cross-references HaCPF05 (HanXRQChr14g0460801)
DNA ref. HanXRQ genome:   HanXRQChr14 (169732128..169729839)
Protein sequence: HaCPF05 (HanXRQChr14g0460801)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   194 (262)
PWM (Da):   %s   22387.49 (28022.1)  
PI (pH):   %s   4.85 (6.62) Peptide Signal:   %s   cut: 20 range:20-281
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MLSLNIGLQEKIKLVPIDLKNRPDWYKEKVYPANKVPALEHNNQVKGESLDLIKYIDTNFEGPSLYPDDTIKQEFGEELLSYTNTFYKAVTTSLKGDGFDDAAAAFDYIEKALSKFDDGPFFLGQFSVDIAYAPFIERFQPYLLDVKKY
DIKVGRPKLAVWIEEMNKNDDFNQTRRDPKELVESYRKRYLSSS*

Retrieve as FASTA  
Remarks
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTTATCTCTAAACATAGTGACATTTATATTTGAGATTGTTTTTTTTTTTGTATGTATTAGATGGAAATATTAACTCTCATCCGACCTCTTATGGATCAGCTCCCTTGGATGATTATGG
AATATTCATAATTTGTGTTTAAACTGTGTACAGGGGGATTGCAGGAAAAGATTAAACTGGTTCCAATTGATCTAAAGAACAGACCAGATTGGTACAAGGAGAAGGTTTACCCTGCAAACA
AGGTGATTCTCTTGCAAAAGTTTTATGCTTTCTACATGATTGTGCATACAGTTTGATTTACAGTCTTTTAAGTTTGGTTCAACCAAAAATCGGCATGCCTTTGCCCCCTGGCGTTTGACA
CGTTCGGCTCCTTGGCGCCGGAGGCAGTTCGGTTCTTGTCTAGAGTTCAGCGCGTGGTCCACAGCAACTTTTCGACCCCTCAGGGGCGAGGCTTTGTTTTTAGTAGATTAGGGTTTTCTA
TTCAGAAAGGGATGGCGGCGCAGTTTGTTGCTCGTCAACCTGCTATCCTTATGTAATTTGTCCTGATGATTGGAATGAAATAAAAATGCTAAATTCTTAACTAAAAAAAAAACCAAAAAT
GCACTTAATACAAACCACTAAGGTAATGCTTCGAAAAAATGCTATTTGTGATATGTCGATAAGAATAACTTGCCTTTGGTGTGTTCTTATGTCATAGGTGTGCCAGCTTTAGAACACAAC
AATCAAGTCAAGGGAGAAAGTCTTGATCTCATCAAGTATATTGACACCAACTTTGAAGGACCGTCACTTTATCCAGATGTAAAGTTTCATATTATGGTTTGATTTTCAAAGGAATTAATA
TATTTTGTTAATTATAACTATAGAACTACAATATATAGGAGATACTATCAAGCAAGAGTTTGGAGAAGAGTTGCTTTCATACACTAATACGTTCTATAAAGCCGTCACCACCTCATTAAA
AGGAGACGGGTTTGATGATGCTGGTATCTTAACTATCACTTTGTTTATCATCTTTCTATATTAAAAAAACAACATATAACATGGTCTTCAATAATCGCAACAGCTCTGCTGCATTTGATT
ATATAGAGAAGGCTCTTTCCAAGTTCGATGATGGCCCATTTTTTCTAGGTCAATTCAGCCTGGTAAGTATGATGAACGCCTAACCGAATTACAGTTATTTGCAACTGCTTCAACTGCTGA
TGTTGGTTAATAGCTGTCTTCATTATATTCTATAAAGGTTTCTGTTTTCTTGAAAACATATTGCGTATGCATGCCTATTTATGATCCATTTGCGTATTTACGAACACATATATGTGCATG
TACAGGTGTAGATATAGCTTATGCTCCTTTCATCGAAAGATTTCAGCCGTACTTGCTAGATGTAAAAAAATACGATATTAAAGTGGGCCGGCCAAAACTTGCAGTCTGGATCGAGGTACT
ACTCTTGCTTTCACAATTGGTGGTGTATGCAAGATTTGTTGTACTTTCAAGTCTAGTGCTTTTGGTTTAAGTCTTTTGTAGAAAAGAAGAAATCACAATTCACACCTACGTTAGTCAACC
TGCTTTTCTTTACAAAACTCTTATCGCAGTTGGTTTCTCTTGCAGGAGAAATGAACAAAAACGATGATTTTAACCAAACCAGGCGGGATCCAAAGGAACTTGTAGAGAGCTACAGAAAAC
GTTATTTGGTACCGATTAACAGTCTCATACTCTCATGTCTTAAGTTTTTGTGTTCACCAAGTTGATATAAGCTAGGAACCATAGTTGTTAAAAGCCATCGCCTCTTGCGCCTAGGCCCAA
TTTCCTAGCGAAGCGAGGCAATTGCGCCTTAAGTCAAGGCTCTTGCGCTTTAATTCTCCAAGTGATGGTTCATGCGCAGGTTCCGGCGAGATTCCTAGATTCTTGAGAGTTTTCGGCCAA
ATTCTCTAAATTCTGAAAGGATTCTAGCTAGATTTCTACTTTTATCTAACGAAACTACTTTTCTACACTAATAAACTAGCATTTTATAACTTTTGGTAATAAATAGACGATATTAAATGT
TATATAATAGCTTTAGTTTATTTTATTTGAAGAATAGTATTAATTTTCTATTATATAAAAATATTTTATGTTTTTTTTGTTGTGCGCTTTTTTTTTCTCAGGCCCGCGCTTTTTTTGCGC
TTTGCGCCTAGGCCCCAGGAAAGGCCTATGCGCCTTGAGTGCGCTTAACGCTTTTAATAACTATGCTAGGAACTAAATACGTTAATAGCATGTTTATTCTTCTAAGTATCACGTGTTTGT
GATCATGCAGTCTCTTCATCATAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTTATCTCTAAACATAGGATTGCAGGAAAAGATTAAACTGGTTCCAATTGATCTAAAGAACAGACCAGATTGGTACAAGGAGAAGGTTTACCCTGCAAACAAGGTGCCAGCTTTAGAA
CACAACAATCAAGTCAAGGGAGAAAGTCTTGATCTCATCAAGTATATTGACACCAACTTTGAAGGACCGTCACTTTATCCAGATGATACTATCAAGCAAGAGTTTGGAGAAGAGTTGCTT
TCATACACTAATACGTTCTATAAAGCCGTCACCACCTCATTAAAAGGAGACGGGTTTGATGATGCTGCTGCTGCATTTGATTATATAGAGAAGGCTCTTTCCAAGTTCGATGATGGCCCA
TTTTTTCTAGGTCAATTCAGCCTGGTAGATATAGCTTATGCTCCTTTCATCGAAAGATTTCAGCCGTACTTGCTAGATGTAAAAAAATACGATATTAAAGTGGGCCGGCCAAAACTTGCA
GTCTGGATCGAGGAAATGAACAAAAACGATGATTTTAACCAAACCAGGCGGGATCCAAAGGAACTTGTAGAGAGCTACAGAAAACGTTATTTGTCTTCATCATAA

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATATCAACAT ACTCTTTGCT ATGTTATCTC TAAACATAGG ATTGCAGGAA AAGATTAAAC TGGTTCCAAT TGATCTAAAG AACAGACCAG ATTGGTACAA GGAGAAGGTT TACCCTGCAA  ACAAGGTGCC AGCTTTAGAA CACAACAATC AAGTCAAGGG AGAAAGTCTT GATCTCATCA AGTATATTGA CACCAACTTT GAAGGACCGT CACTTTATCC AGATGATACT ATCAAGCAAG  AGTTTGGAGA AGAGTTGCTT TCATACACTA ATACGTTCTA TAAAGCCGTC ACCACCTCAT TAAAAGGAGA CGGGTTTGAT GATGCTGCTG CTGCATTTGA TTATATAGAG AAGGCTCTTT  CCAAGTTCGA TGATGGCCCA TTTTTTCTAG GTCAATTCAG CCTGGTAGAT ATAGCTTATG CTCCTTTCAT CGAAAGATTT CAGCCGTACT TGCTAGATGT AAAAAAATAC GATATTAAAG  TGGGCCGGCC AAAACTTGCA GTCTGGATCG AGGAAATGAA CAAAAACGAT GATTTTAACC AAACCAGGCG GGATCCAAAG GAACTTGTAG AGAGCTACAG AAAACGTTAT TTGTCTTCAT  CATAAGGTTC AGGTTTTGCG ATTCAGTCAC GCCATGGGAT GCAGGAACAT TGCATGGACA AGAAGACCTG ATTAGTTCCT TTGGATATTT AAGAATAATA TGTTACATAG GTTATTTGTG 
CAACATACTA TTGACAAAAT AAAACTATGT TATTATGTTT AATCTATTTT CTAATATGCT ACAATTTTGT GGTCGATTAT ACATTTATAC AACATGCATC TATTATTTA 

Retrieve as FASTA