View Redoxidase 14483

Entry information : HaLilium01HanXRQChr02g0054491

Entry ID	14483
Creation	2017-11-03 (Christophe Dunand)
Last sequence changes	2017-11-03 (Christophe Dunand)
Sequence status	N/D
Reviewer	Not yet reviewed
Last annotation changes	2017-11-23 (Catherine Mathe (Scipio))

Peroxidase information: HaLilium01HanXRQChr02g0054491

Name

HaLilium01HanXRQChr02g0054491

Class

Thioredoxin Type Lilium [Orthogroup: Lilium002]

Taxonomy

Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus

Organism

Helianthus annuus (Sunflower) [TaxId: 4232 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	HaLilium01 start..stop	S start..stop
HaLilium05	406	3.19e-144	1..290	1..295
ThasLilium01-2	296	5.19e-101	77..290	75..283
ThasLilium01-1	295	1.08e-100	7..238	24..236
AtLilium01	278	1.06e-95	98..290	1..177

Gene structure Fichier

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	161923820..161924053	232	N° 2	161923004..161923180	175	N° 3	161921970..161922134	163	N° 4	161921139..161921435	295
complement(join(161921139..161921435,161921970..161922134,161923004..161923180,1 61923820..161924053))

Literature and cross-references HaLilium01HanXRQChr02g0054491

DNA ref.	HanXRQ genome: HanXRQChr02 (161924053..161921139)

Protein sequence: HaLilium01HanXRQChr02g0054491

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	290
PWM (Da):	31326.66
PI (pH):	8.35

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MAKIMSSDCVFSGGNCGFGCSNLENLGPVMVKMPIWSKLGSSLTARSSGDGEFFGRSLTLKSQERRVCTHGANASDAKMSISIGKSLRWWEKGVQPNMKEITGAEDLVESLLNAGDKLVV
VDFFSPGCGGCKALHPKLCQLAEMNPDVQFLQVNYEEHKSMCYSLNVHVLPFFRFYRGAEGRLCSFSCTNATIKKFKDALAKHKPERCSLGPPKGLEEKELVALGANPDLSFAYTPKPEH
PQKEVAPPPMPAVAASNSSSESSLPLPVPLKSTLEKKEDNKNKTLLSSGR*

Retrieve as FASTA

Remarks

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCGAAGATTATGAGTAGTGATTGTGTGTTTTCTGGTGGTAATTGTGGTTTTGGTTGTAGTAATTTGGAGAATTTGGGTCCTGTTATGGTCAAGATGCCGATTTGGTCAAAATTAGGA
TCAAGTTTGACCGCCCGGTCATCTGGTGATGGTGAGTTTTTTGGTCGGAGTTTGACTTTAAAAAGTCAAGAAAGAAGGGTTTGTACCCATGGGGCTAATGCTTCTGATGCAAAGGTTAGA
ATTTTTTTTTTTTTTTTTTTTGTATCACTTTATTGCCCATTATTGGTTAATCTTGATGTCAAGTAATTTGTTTTAAAATTTAGTTTTAGGGTTTGTTTTTTTTATTTTTTTTATTTTTTG
TATGTTATTACCTTTTTTCATTGTTTAGTTTTGATGTCAAGTGATTTGTTTTGAAATTTAGTTTTAGGGTTTGATTTTAATAGTGGGTTCTATTTATCTTGTTATCAAGTTTTTTTTATT
TTTATTTTATATATGAATTAGTTCAATAATATTATTTTTTTTGTTATGCTCAAAGAACCTAGATAGAAATTCATGCATAATGTTTTATTAGTTGATTATTATCTATTATGCTCAAAGACC
CCACAAAAGGTATAAACTTTTTTGATCTTTCTTGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGAAATGAGGATTTGGATCTTGATATTTATAAATCTTGGAAGAAAACT
GTTAAATCTTGATGGTTGAGAATTCGATCCGGTTTCTTGTTTTTCCGTTTTCGATTTATCTTAGTATGCAGCTTATTTTTATGAAATGTAATATGAAATGATCGAATTAAGTGATTAAAC
CTGATTAATGATTTTGAAATTGGGATTAAACAGATATGAGTATAAGCATTGGGAAATCTTTAAGATGGTGGGAGAAAGGTGTTCAACCAAACATGAAGGAAATAACAGGTGCGGAAGATC
TTGTTGAATCGCTTTTGAACGCGGGTGATAAATTGGTTGTTGTCGATTTCTTTTCACCTGGTTGTGGCGGTTGCAAAGCTCTTCATCCCAAGGTATGTCTTAAATTAGTGTATTTTCTCT
CGATTAGTTTTATAACGTAAAGAACAGACAAATTGCAAGAACGTTTAATCTCTTTATAGTGTTTGGATGAAGAAAGTGTTTATAGATATCTGCTTAATTTAGTGTGAAATAAGTTGTTTT
CGATAAGCATTTTGAATCTGCTTATTTCAAACCAAATATTCTCTGCGGATTGAAAATTACAAGTTTATCCTTGGTGTTCGATAAGTTGGTTTTATATAAACTAAGGGATGCAAATGAGCC
GGCTCATGAGCTGCTTGAGATCGGCTCGAGAAAAAGCTCGAAACGAGCCGAGCCTTATCGAGTCCGACCCGAGCTTGAGCCTAAAATAAAACTCGTTTATTTATCGAGCCCGAGCTCGAG
CCTTGCATGTGAAGCTAAGCTCGTCGGGCTCGCCGTGCCTTAGTGTAATATTAGTGTTTATTAATATTTAATAACAGTTACCCCTTATTTAAACTTGTCTAGTAAACCAGTCGAGCCGAG
CTTATTTAAACTTGTTTACGAGCCGAGCCGAGCCCGAGACTAAAAATAAGCTTGTTTAGTAAACGAGCCCGAGCCCGAGCTTCACTTATCGAGCTCGCAAGCCTACAGGAGGCTATTATT
CATATTATTTTTTTTTATATTAATTAATAGATAATAAATGAGCCGAGCCCAAGCTGAGCTCAAGCTTGAAAAACTACCAACGAGCCAAGCTCGAGCTTGGTCAAGCTCAGCTCGGCTTGT
TTGCACCCCTAATATAAACGATTCCAATCACCCTCTAAATATGTCTTAAAAAGAAGGTGTATTACATTGCATTGCAAAATTTTCATTTTTTATAACCTAATTCTCTTTGTGTGATTTGCA
GTTTTATGTCAGTTAGCAGAGATGAATCCGGACGTACAATTTCTACAAGTGAACTACGAGGAGCACAAGTCTATGTGTTATAGCCTCAATGTTCATGTTCTTCCTTTCTTTCGGTTTTAC
AGAGGCGCTGAGGGTCGTCTTTGTAGCTTTAGCTGTACCAATGCTACGGTTCGTGTCCACATAACCTCTTTTTACCGTTTATTTTAATTTTTTTGGGGGTGTTTGGCATTATGTTTTGAA
AGTGATTGCCTAATTATGGTGCTTCTAGTCATAAATAATCAAGAGTAAAGTACACAGATGGTCCCTGTGGTTAACCAAATTTTCGGATTTAGTCCCTAGCTTTTCAAAAGTACACGGATG
GTCCCTGTGGTTTGCACTTTGTAACGCATTTAGTCCCCAACTAACAAATCTAAAGGTTTCAACAGGTCCAAATTAGGGACTAAATGCGTTTCAAAGTGCAAACCACTGCACTTTTAGCAA
AAGTTGGGGACGGAATATATATTACAAAGTGCAAACCATAGGGACCATTCGTGTACTTTTGGAAAGTTGGGGACCAAATCTAAAATTTTGGTCAACGTCAAGGACCATCCTTGTACTTCA
CTCAATAATCAATTTTTGGGATTGCTTATCAAATCCGTTTATCATCCTTTATTGCGCGTTGCTAACGTAATAATAATAATAATAATAATAATATATACACAGATATCAAGAAATTTAAAG
ACGCATTAGCAAAACACAAGCCGGAACGATGCAGTTTAGGCCCGCCAAAAGGTCTAGAGGAGAAAGAATTAGTGGCACTCGGGGCCAACCCGGACCTTTCTTTTGCGTATACTCCAAAAC
CCGAGCACCCGCAAAAGGAGGTTGCACCGCCGCCAATGCCAGCGGTGGCAGCGTCGAACTCATCATCCGAGTCAAGTCTCCCTCTTCCTGTTCCTCTTAAATCGACATTGGAAAAGAAAG
AAGACAATAAAAATAAAACATTGTTGTCTTCTGGGAGATGA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA

cDNA►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATTATCCACC ATTGGATTAT GTTATCCAAA AAAAAAAAAA AAACTCAAAA AAGTGAAATT GACCCAACAA CAACTTCTTC AATCTCAAAT TCGAAACAAC CCCTTTTCCT TCTTACACAC AACAAGAAAT TTTGAATTTC CCCTTTTTCG CCTTTGACCC AAATCCAAAA ACCCTAATTT CAATCCTCAA AAAGACCCAA TTTTTCTGCA ATTAAATTGA ATGGCGAAGA TTATGAGTAG TGATTGTGTG TTTTCTGGTG GTAATTGTGG TTTTGGTTGT AGTAATTTGG AGAATTTGGG TCCTGTTATG GTCAAGATGC CGATTTGGTC AAAATTAGGA TCAAGTTTGA CCGCCCGGTC ATCTGGTGAT GGTGAGTTTT TTGGTCGGAG TTTGACTTTA AAAAGTCAAG AAAGAAGGGT TTGTACCCAT GGGGCTAATG CTTCTGATGC AAAGATGAGT ATAAGCATTG GGAAATCTTT AAGATGGTGG GAGAAAGGTG TTCAACCAAA CATGAAGGAA ATAACAGGTG CGGAAGATCT TGTTGAATCG CTTTTGAACG CGGGTGATAA ATTGGTTGTT GTCGATTTCT TTTCACCTGG TTGTGGCGGT TGCAAAGCTC TTCATCCCAA GTTATGTCAG TTAGCAGAGA TGAATCCGGA CGTACAATTT CTACAAGTGA ACTACGAGGA GCACAAGTCT ATGTGTTATA GCCTCAATGT TCATGTTCTT CCTTTCTTTC GGTTTTACAG AGGCGCTGAG GGTCGTCTTT GTAGCTTTAG CTGTACCAAT GCTACGATCA AGAAATTTAA AGACGCATTA GCAAAACACA AGCCGGAACG ATGCAGTTTA GGCCCGCCAA AAGGTCTAGA GGAGAAAGAA TTAGTGGCAC TCGGGGCCAA CCCGGACCTT TCTTTTGCGT ATACTCCAAA ACCCGAGCAC CCGCAAAAGG AGGTTGCACC GCCGCCAATG CCAGCGGTGG CAGCGTCGAA CTCATCATCC GAGTCAAGTC TCCCTCTTCC TGTTCCTCTT AAATCGACAT TGGAAAAGAA AGAAGACAAT AAAAATAAAA CATTGTTGTC TTCTGGGAGA TGATGTGTGT TTAAGAATTA AGATTATAAA AAAATGGTCA TATGTTTAAT GTTAGTAGTA TATTAGTGTT TGTATGTACA GGGTAGCTTT GTACTATGTT TTTTGTTGTG TAAATAGTAC AAAAGTTGAG CTGCAAGTGT GTTTTTAGAA GCCTAAATTT GTCTAATATA TGTATGTATA TGAGAGAAAG TTTGTTTTTA CTTTTAAACA TGGTGTTAGT GTATGTATGT ATATACAGGT TTATTTATAT ATTGTAACAT GTGCTTGTTT TTTTGCTGAT GACAATGGTA TGAAAAGATT ATTGATCATA CAATCAAGGA AGATTGAACA GAGGGTTTAT GATCTGTTTA
ACCTAAATGG TAGTGTTTGT TTCAAAGAAT AAAATGGATT TTAAATAAAA TTAAAATGTA GATTCACACC TTATGTTGTT TGTTTCAACA AAAGAATGAA AATGAATTAG AATT

Retrieve as FASTA