View Redoxidase 14487

Entry information : HaLilium05HanXRQChr13g0397771

Entry ID	14487
Creation	2017-11-03 (Christophe Dunand)
Last sequence changes	2017-11-03 (Christophe Dunand)
Sequence status	N/D
Reviewer	Not yet reviewed
Last annotation changes	2017-11-23 (Catherine Mathe (Scipio))

Peroxidase information: HaLilium05HanXRQChr13g0397771

Name

HaLilium05HanXRQChr13g0397771

Class

Thioredoxin Type Lilium [Orthogroup: Lilium002]

Taxonomy

Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus

Organism

Helianthus annuus (Sunflower) [TaxId: 4232 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	HaLilium05 start..stop	S start..stop
HaLilium01	412	1.25e-146	1..295	1..290
ThasLilium01-2	290	8.81e-99	43..295	40..283
ThasLilium01-1	289	2.36e-98	51..239	48..236
AtLilium01	271	7.85e-93	99..295	1..177

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '14487' 'join(76983409..76983642,76984033..76984212,76984280..76984444,76984833..76985141)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	76983409..76983642	232	N° 2	76984033..76984212	178	N° 3	76984280..76984444	163	N° 4	76984833..76985141	307
join(76983409..76983642,76984033..76984212,76984280..76984444,76984833..76985141 )

Literature and cross-references HaLilium05HanXRQChr13g0397771

DNA ref.	HanXRQ genome: HanXRQChr13 (76983409..76985141)

Protein sequence: HaLilium05HanXRQChr13g0397771

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	295
PWM (Da):	31970.15
PI (pH):	8.66

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MAKIISNGYKFPACNHGFGYNKFDSFSHVMVKMPVFSTSGSNLTLRMSADADFFDRRAALGGQGRRVLTQVAAASDSKMGIIGIGKSLKWWEKGLQPNMKEITGAEDLVESLSKAGDQLV
IVDFFSPGCGGCRALHPKLCQLAEMNPDVQFLQVNYEEHKSMCYSLNVHVLPFFRFYRGDEGRLCSFSCTNATIKKFKDALAKHKPDRSSVGPAKGLEEKELVALGANRDLSFAYNPQPE
NPQKEVAPPPLLPVPTVATGGSGSQSLPLPLPIPLKSTSESKEDNKDKTLVSSGR*

Retrieve as FASTA

Remarks

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCTAAGATCATAAGTAATGGTTATAAGTTTCCTGCTTGTAATCATGGTTTTGGTTACAATAAGTTTGATAGTTTTTCTCATGTTATGGTAAAGATGCCGGTTTTTTCGACTTCCGGA
TCGAATTTGACCCTTCGGATGTCGGCCGACGCCGATTTTTTCGATCGGCGTGCGGCTTTAGGTGGTCAAGGCAGAAGGGTTCTGACACAAGTAGCTGCAGCTTCTGATTCTAAGAGGTCT
GTTTTTATTATTTTCATTTTTTTTATTTTCTTAATTCAATTACATTATTAAGCAATTTGTTTTGAAATTCAAATTGGGTGTCTTCAAGATTTGTTTTTTTTTTTTGGTTTGGTTTATGCA
TATGAATTAATTAAAAAATATCTTTTTTCAACAAGAAATATGAGAACTTGATGTTTTACTTTTACCCAGATATAAATTACTACAAAATAGGTAAATTATTGTTTTACCGTGTTAAGAAAA
CCAGAAAAACAACAAATGTTAGGAATCAGATCTTGATTTTAAATATCTTGCAAGAAAAAGCATAAATCTTGAAATATATATAACAAGCAATCAAATTAACTATACAGATACTATGTTGTT
GATATCTTGAAATTGTGATTAAACAGATGGGTATTATTGGCATTGGAAAATCTTTAAAATGGTGGGAAAAAGGGCTTCAACCAAACATGAAGGAAATAACCGGTGCAGAAGATCTCGTTG
AATCGCTGTCAAAAGCCGGCGATCAACTAGTCATTGTCGATTTCTTCTCACCTGGTTGTGGTGGCTGCAGAGCTCTTCACCCCAAGAGGTATGTATGTCATTTGTCGAGCTTTCGTTAAA
GACCTTTTTTTAATCTTTTTTCTTTGATTTTGCAGTTATGTCAATTAGCAGAGATGAATCCTGATGTCCAGTTTTTGCAAGTGAACTATGAGGAGCACAAATCCATGTGTTATAGCCTCA
ATGTTCATGTTCTTCCATTCTTTCGGTTTTATAGAGGGGATGAGGGTCGTCTTTGTAGCTTTAGTTGTACCAATGCTACGCGGTTCGTGCCAATTTTATTATTTCTTGTTTATTTTAGTA
AGGGTAAATTGCATTTTACGTCATTTAAGTTTCAGCAAAATTTCAGGTGCAGTTTCTTTAACTAACGAAATTACAGCGGATGTCCTTTATGTTCTAATTTCCTTACAGTAGATGTCCTTT
ATGTTTTAATTTCTTTATAGCGGATGTCTTTTATTTTTGTAATATTTTTACGGAGAAAGGATTGCGCCTGTAAAAAAAAAATAGAACATAAAGGACATTCGCTGTAATTTCGTTAGTTAA
AGGACAACGCTTGAAATTTTGCGGAAACTTAAAGGACGTAAAATGCAATTTACCCTTTTAGTAACGTTATAAACGATGATTGTTTGAACTCGAGTACAATGATGATACAGATCAAGAAGT
TTAAAGATGCATTGGCGAAACACAAGCCCGACCGAAGCAGTGTAGGCCCAGCGAAAGGTCTCGAGGAGAAAGAGTTGGTGGCACTCGGGGCCAATCGGGACCTTTCTTTTGCGTATAATC
CACAACCGGAGAACCCGCAAAAGGAGGTTGCACCACCACCATTGCTGCCAGTGCCAACGGTGGCAACAGGGGGTTCAGGTTCACAAAGCCTGCCTCTTCCTCTTCCGATTCCCTTGAAGT
CAACATCGGAATCGAAAGAAGATAATAAAGATAAAACATTGGTGTCTTCTGGGAGATGA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA

cDNA►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

TCTGATTCGT GTATGACTAG GAAAAGCATA GTCCAGAAAA AAATGAAATT AATCCATAAT GAAAAAATAA TGACCCCACA ATTTCTTCAA TCTCAATTTC AAAACCACTT TAAGTCTTAC ACGTATACAA TGAAATTGCA CAATAAGCAA TCCCAATTGC CCCTTTTATT GGCTTTGACT TGAAGCAATC CAAAAACCCT GAATTAAATC TCATTCATCT TTGATCTTAC AAAAACTAAA AAACCCATTT TTCTTCAATC AAATTGAATT AGGGAAATAT TGTCATATTG AAATAATCAT GGCTAAGATC ATAAGTAATG GTTATAAGTT TCCTGCTTGT AATCATGGTT TTGGTTACAA TAAGTTTGAT AGTTTTTCTC ATGTTATGGT AAAGATGCCG GTTTTTTCGA CTTCCGGATC GAATTTGACC CTTCGGATGT CGGCCGACGC CGATTTTTTC GATCGGCGTG CGGCTTTAGG TGGTCAAGGC AGAAGGGTTC TGACACAAGT AGCTGCAGCT TCTGATTCTA AGATGGGTAT TATTGGCATT GGAAAATCTT TAAAATGGTG GGAAAAAGGG CTTCAACCAA ACATGAAGGA AATAACCGGT GCAGAAGATC TCGTTGAATC GCTGTCAAAA GCCGGCGATC AACTAGTCAT TGTCGATTTC TTCTCACCTG GTTGTGGTGG CTGCAGAGCT CTTCACCCCA AGTTATGTCA ATTAGCAGAG ATGAATCCTG ATGTCCAGTT TTTGCAAGTG AACTATGAGG AGCACAAATC CATGTGTTAT AGCCTCAATG TTCATGTTCT TCCATTCTTT CGGTTTTATA GAGGGGATGA GGGTCGTCTT TGTAGCTTTA GTTGTACCAA TGCTACGATC AAGAAGTTTA AAGATGCATT GGCGAAACAC AAGCCCGACC GAAGCAGTGT AGGCCCAGCG AAAGGTCTCG AGGAGAAAGA GTTGGTGGCA CTCGGGGCCA ATCGGGACCT TTCTTTTGCG TATAATCCAC AACCGGAGAA CCCGCAAAAG GAGGTTGCAC CACCACCATT GCTGCCAGTG CCAACGGTGG CAACAGGGGG TTCAGGTTCA CAAAGCCTGC CTCTTCCTCT TCCGATTCCC TTGAAGTCAA CATCGGAATC GAAAGAAGAT AATAAAGATA AAACATTGGT GTCTTCTGGG AGATGAGTTT TATCATAAGT ATTTCGTATG TTATATTTTA GTGTTTTTGT ACTATTTTTG TGGATGTGTA AATAGTACAA TGGTCTAGCC CAAGTGTGTG CACATCTGTA TGCCCATTTT ATTGTGGCAT TCAGAAGCTT
AAATTTGAAA TTTCTGTCTA ATAAGAGGGT GATTTTGTTT TACACATTGG CTTTTTTTTT TTTTTT

Retrieve as FASTA