1. Browse the Database
  2. View Redoxidase
Entry information : LsaPrx02
Entry ID 1452
Creation 2006-08-12 (Christophe Dunand)
Last sequence changes 2006-08-12 (Christophe Dunand)
Sequence status partial
Reviewer reviewer name not stored
Last annotation changes 2008-06-16 (Christophe Dunand)
Peroxidase information: LsaPrx02
Name LsaPrx02
Class Class III peroxidase     [Orthogroup: Prx013]*
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Lactuca
Organism Lactuca sativa (Lettuce)    [TaxId: 4236 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LsaPrx02
start..stop		 S start..stop
LsePrx02 516 0 25..278 2..255
LperPrx02 469 1.17e-169 3..277 6..283
LvPrx02 412 2.32e-147 1..277 1..258
HaPrx34 400 1.45e-141 1..253 1..242
Literature and cross-references LsaPrx02
Literature Kozik,A., Michelmore,R.W., Knapp,S., Matvienko,M., Rieseberg,L., Lin,H., van Damme,M., Lavelle,D., Chevalier,P., Ziegle,J., Ellison ,P., Kolkman,J., Slabaugh,M.S., Livingston,K., Zhou,Y., Lai,Z., Church,S., Jackson,L. and Bradford,K.
Lettuce and Sunflower ESTs from the Compositae Genome Project
Unpublished (2002)

EST ref. GenBank:   DY967911 [5' end]
Protein sequence: LsaPrx02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   278 (258)
PWM (Da):   %s   29494.32 (27375.2) Transmb domain:   %s   i5-23o
PI (pH):   %s   9.13 (9.09) Peptide Signal:   %s   cut: 21 range:21-278
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MMKNIIGLFL VSILVVGCMG AGGRGGNGHG RGHGNGNGGG LKMNFYGKLC RLDRLVTVES TVRQIVWSKV SADPSMAAKL LRLHYHDCFV RGCDASILLD PTQNKTTEKT AGPNRSISGY  EVIDEIKTKL EAKCPGIVSC ADIVALAARD AVSFQFRKEM WPVFTGRKDG TVSLASEVGG NLPSAGANFT TLLTQFGTKG LNLNDLVALS GAHTIGISRC TLVARRLYNF TGVGDADPSL 
DVSYAQTLRG LCPTLRTQPQ LFEWIPxALS PLILITIG 

Retrieve as FASTA  
Remarks Partial sequence from 2 EST sequences (DY967911, BQ860887) (TC15250 TIGR mix of sativa and seriola ). Little 3' fragment is missing. Cultivar="salinas".